CF417736

Overview
NameCF417736
Unique NameCF417736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6221 contig Csv1_Contig6221:20..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.277e-27
Identity = 64/153 (41.83%), Postives = 87/153 (56.86%), Query Frame = 2
Query:   77 TLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEI--KPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQT-DKDDRPIHDVKILRTSV 526
            T+ T+ G   VEL+   +P+T  NF +L++ G Y+N  FHR+I  F+VQ            S +G  F DE   K   KH   G+LSMAN+GP TNGSQFF T  P  HLDGKHT+FG++  G E + ++  V      DRP+ D+ I   +V
Sbjct:  317 TITTNFGPLNVELHGDRAPKTVYNFVQLAKAGKYDNVVFHRLIPGFMVQGGDPTGTGRGGESYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFFFTFRPTPHLDGKHTVFGKLVGGEETLDKIERVNVRPGGDRPVRDIVIQGVTV 469          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL3_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus oryzae GN=cyp4 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 64/158 (40.51%), Postives = 90/158 (56.96%), Query Frame = 2
Query:   74 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXX------SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGME-VIKRLGSVQTDKDDRPIHDVKILRTSV 526
            VTL T +G   +E++ +  P+T  NF  L   GYY+N+ FHR I  F++Q                  SI+G  F DEI+  LKH   GI+SMAN+GPNTNGSQFFIT A   HLD K+T+FG+V  G +  +  +  V  D+  RP+ + +I   ++
Sbjct:    3 VTLHTDLGDIKIEVFCEAVPKTAENFLALCASGYYDNNTFHRNIPGFMIQVHEHLHTGDPTGTGKGGNSIWGKKFNDEIRSTLKHNSRGIVSMANSGPNTNGSQFFITYAKHPHLDTKYTVFGKVIDGADSTLDMMEKVPVDEKHRPLQEFRIKSVTI 160          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.883e-27
Identity = 70/166 (42.17%), Postives = 99/166 (59.64%), Query Frame = 2
Query:   83 ETSMGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD*CHETVMETNVS 568
            + S+G   + LY K  P T  NF  L+   +G+ Y  S FHR+IKDF++Q             SIYG  F+DE   +L+HT  G+LSMANAG +TNGSQFFIT A    LDGKH +FG V  G +++ ++ +V   ++DRP+ DVKI+++       E  ME +V+
Sbjct:   44 DESLGRIVLGLYGKTVPETAENFRALATGEKGFGYEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDE-NFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVLEGYDIVDKIQNVPKGRNDRPLKDVKIVKSG------ELEMEADVA 202          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.624e-27
Identity = 63/148 (42.57%), Postives = 88/148 (59.46%), Query Frame = 2
Query:   71 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRG-MEVIKRLGSVQTDKDDRPIHDVKI 511
            +V L+T+ G   +EL+ K +P+ CRNF +L    YY+N+ FHR++  FIVQ            SIYG  F+DE    L+    G+++MANAGP+ NGSQFF TL  A  L+ KHTIFG+V    +  + RL  V  D ++RP +  KI
Sbjct:   14 KVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGTGGESIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYNMLRLTEVDIDDEERPRNSHKI 161          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 6.624e-27
Identity = 68/147 (46.26%), Postives = 91/147 (61.90%), Query Frame = 2
Query:   83 ETSMGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            +  +G     L+ K  P+T  NF  L+   +G+ Y NSKFHR+IKDF++Q             SIYG  F DE   +LKH G G +SMANAG +TNGSQFFIT    + LDGKH +FG+V  GMEV++++ S +TD  D+P+ DV I
Sbjct:   54 DEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVII 199          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.130e-26
Identity = 63/148 (42.57%), Postives = 87/148 (58.78%), Query Frame = 2
Query:   71 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRG-MEVIKRLGSVQTDKDDRPIHDVKI 511
            +V L+T+ G   +EL+ K +P+ CRNF +L    YY+N+ FHR++  FIVQ            SIYG  F+DE    L+    G+++MANAG + NGSQFF TL  A  L+ KHTIFG+V    +  + RL  V  D D+RP +  KI
Sbjct:   14 KVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYNMLRLSEVDIDDDERPHNPHKI 161          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: SDC10_MOUSE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mus musculus GN=Sdccag10 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 61/142 (42.96%), Postives = 85/142 (59.86%), Query Frame = 2
Query:   71 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRG-MEVIKRLGSVQTDKDDRP 493
            +V L+T+ G   +EL+ K +P+ CRNF +L    YY+N+ FHR++  FIVQ            SIYG  F+DE    L+    G+++MANAGP+ NGSQFF TL  A  L+ KHTIFG+V    +  + RL  V  D ++RP
Sbjct:   14 KVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGTGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYNMLRLTEVDIDDEERP 155          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 69/154 (44.81%), Postives = 89/154 (57.79%), Query Frame = 2
Query:   83 ETSMGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            +  +G   + L+ K  P+T  NF  L+   +GY Y  SKFHR+IKDF++Q             SIYG  F DE   +LKH G G +SMANAGP+TNGSQFFITL   + LDGKH +FG+V  GM V+  +    TD  DRP  D  I+ +   D
Sbjct:   48 DKDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDE-NFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQATDGHDRPFTDCSIVNSGKID 200          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 66/144 (45.83%), Postives = 85/144 (59.03%), Query Frame = 2
Query:  107 VELYYKHSPRTCRNFAELS--------RRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            + L+ K  P+T  NF +LS        R   Y  S FHR+IK F++Q             SIYG  F DE   +L+H GAG LSMANAGP+TNGSQFFIT    S LDGKH +FG+V  GM +++++ S  TD  DRP+  +KI
Sbjct:   50 IGLFGKTVPKTVENFKQLSIGTQLKDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDE-NFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKI 192          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 66/147 (44.90%), Postives = 92/147 (62.59%), Query Frame = 2
Query:   83 ETSMGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            +  +G   + L+ K  P+T  NF  L+   +G+ Y +SKFHR+IKDF++Q             SIYG  F DE   +LKH G G +SMANAG +TNGSQFFIT    + LDGKH +FG+V  GM+V++++ S +TD  D+P+ DV I
Sbjct:   54 DEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVESTKTDGRDKPLKDVTI 199          
The following BLAST results are available for this feature:
BLAST of CF417736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
PPIL2_CRYNE2.277e-2741.83Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]
PPIL3_RHIOR2.973e-2740.51Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhiz... [more]
PPIB_EMENI3.883e-2742.17Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
SDC10_BOVIN6.624e-2742.57Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bo... [more]
PPIB_HUMAN6.624e-2746.26Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
SDC10_HUMAN1.130e-2642.57Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ho... [more]
SDC10_MOUSE1.476e-2642.96Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mu... [more]
PPIC_BOVIN1.476e-2644.81Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
PPIB_SCHMA1.476e-2645.83Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIB_BOVIN1.476e-2644.90Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-666 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417736 ID=CF417736; Name=CF417736; organism=Citrus sinensis; type=EST; length=716bp
CTGAGTTTCTGGTAGTGTTGTGGTCTTGAAAGCAACAATAAAGATGCTGG
CAAGTGACGACGGTCCGCCGGAGGTCACTTTAGAAACTTCCATGGGCTCT
TTCACCGTCGAGCTTTACTACAAGCACTCTCCAAGAACTTGCAGGAACTT
TGCTGAACTATCTCGCAGAGGTTATTATAATAACAGCAAATTCCACAGAA
TTATTAAGGATTTTATAGTTCAAGGTGGAGATCCTACCGGGACTGGAAGG
GGAGGAGATTCCATATATGGCCATGTTTTCGAAGATGAAATAAAACCAGA
ATTAAAGCATACTGGAGCTGGGATCTTGTCCATGGCAAATGCTGGTCCAA
ATACAAATGGAAGCCAGTTCTTTATCACTTTGGCGCCTGCTTCACATCTG
GATGGAAAGCACACTATATTTGGAAGAGTATGCAGAGGAATGGAAGTGAT
CAAAAGGCTTGGCAGTGTCCAAACTGATAAAGATGACAGGCCCATCCATG
ACGTTAAGATACTACGGACTTCTGTTAAGGACTGATGCCATGAAACGGTT
ATGGAAACCAACGTTTCCACATGATTTTGGGTGCACTAGAGCCAGTGTTC
AAAAATCTGATTCTGAAAATTTCTAACATCTGATTTTGGATGCACTGTAC
TTTGGTATTTTATTGAAACAGAAGGCAAATATGGATCATTTGGTAATTCT
CGTCTTATTTACCATT
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