CF417736

Overview
NameCF417736
Unique NameCF417736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6221 contig Csv1_Contig6221:20..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.077e-24
Identity = 69/179 (38.55%), Postives = 99/179 (55.31%), Query Frame = 2
Query:   14 SVVVLKATIKMLASDDGPPEVTL---------ETSMGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            +++V   T + ++++   P +T          E S+G     LY K  P+T  NF +L+  + GY Y  S FHR+I  F++Q             SIYG  F DE   +L+HT  G+LSMANAGP++NGSQFFIT    S LDGKH +FG+V  GM+V+ ++    T+   +P  DV I
Sbjct:   12 TLLVTLCTFRFVSAESKGPVITDKIYFDIKQGEESLGRIVFGLYGKTVPKTAENFKQLATGQNGYGYKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDE-NFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIEKTPTNYRSKPNVDVVI 189          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.077e-24
Identity = 64/152 (42.11%), Postives = 86/152 (56.58%), Query Frame = 2
Query:   95 GSFTVELYYKHSPRTCRNFAEL----------SRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILR 517
            G   +EL+    P+T  NF  L           ++  Y  S FHR+I  F++Q             SIYG  F DE     KHT  G+LSMANAGP TNGSQFFIT     HLDGKH +FG+V  GM+V++++ + QTD+ D+P+ +VKI +
Sbjct:   16 GRIIMELF-PDVPKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADENFIH-KHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVEGMDVVRKIEATQTDRGDKPLSEVKIAK 165          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.019e-24
Identity = 62/134 (46.27%), Postives = 80/134 (59.70%), Query Frame = 2
Query:  110 ELYYKHSPRTCRNFAEL-------SRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDD 487
            EL+    P+T +NFA L        R   Y  S+FHR+IK+F++Q             SIYG  FEDE   ELKH    +LSMANAGPNTNGSQFFIT  P  HLDGKH +FG+V +G   ++ + +++T  DD
Sbjct:   22 ELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDE-NFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDD 154          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 67/165 (40.61%), Postives = 90/165 (54.55%), Query Frame = 2
Query:   47 LASDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSR--------RGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILR 517
            LA  DG   V +ET+ G+  + L+++ +P T  NF  L+         R +Y    FHR+IKDF++Q               G+ F DE  P L+H   G+LSMANAGP TNGSQFFIT      LDGKHT+FG+V  GMEV+  + +  T      I  +KI+R
Sbjct:   34 LAVADGIYAV-METNRGTIVLSLFFEKAPLTVCNFVGLAEGTLAVCKGRPFYQGLTFHRVIKDFMIQGGDPQGNGTGGP---GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHVATPWLDGKHTVFGKVVEGMEVVHAIIAGDT------IRSLKIVR 188          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIB1_RHIOR (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.953e-24
Identity = 64/147 (43.54%), Postives = 86/147 (58.50%), Query Frame = 2
Query:   83 ETSMGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            + S+G   + LY K  P+T  NF +L+    GY Y  S FHR+IK F++Q             SIYG+ F DE   +L+H+  G+LSMANAG +TNGSQFFIT      LDGKH +FGRV  GM+V+ ++ +  T    +P  DV I
Sbjct:   44 DESLGRIVLGLYGKTVPKTAENFKQLATGENGYGYKGSTFHRVIKKFMIQGGDFTNHDGTGGKSIYGNRFADE-NFKLRHSTPGLLSMANAGRDTNGSQFFITTVVTPWLDGKHVVFGRVLEGMDVVTKIENTPTGSRSKPSVDVVI 189          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.953e-24
Identity = 65/137 (47.45%), Postives = 80/137 (58.39%), Query Frame = 2
Query:   95 GSFTVELYYKHSPRTCRNFAEL---SRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRP 493
            G   + L+ +  P+T  NF  L    ++  Y  S FHRIIKDF++Q             SIYG  FEDE    LKHTG GILSMANAGPNTNGSQFFI     S LD KH +FG+V  GM++++ L S +T   D P
Sbjct:  109 GRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDE-NFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVP 244          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.169e-23
Identity = 61/143 (42.66%), Postives = 81/143 (56.64%), Query Frame = 2
Query:   92 MGSFTVELYYKHSPRTCRNFAELSRRGY--------YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRP 493
            +G+  +EL+   +PRT  NF +     Y        Y N  FHR+IKDF++Q             SIYG  F DE   ELKH G G+LSMANAG +TNG QFFIT A    LD KH +FGRV  GM  ++++ +V T  +++P
Sbjct:   30 IGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDFMIQGGDFCNGDGTGLMSIYGSKFRDE-NFELKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGMLTVRKIENVPTGANNKP 171          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 1.527e-23
Identity = 62/147 (42.18%), Postives = 86/147 (58.50%), Query Frame = 2
Query:   92 MGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRT 520
            +G   + LY K  P+T  NF  L+   +G+ Y  S FHR+IK F++Q             SIYG  F DE   +LKH+  G+LSMANAG +TNGSQFFIT    S LDGKH +FG V  G +V++++ + +T   D P   +KI ++
Sbjct:   48 LGRIVMGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDE-NFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVLEGYDVVEKIENTKTGPRDAPAEPIKIAKS 193          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.527e-23
Identity = 63/150 (42.00%), Postives = 85/150 (56.67%), Query Frame = 2
Query:   92 MGSFTVELYYKHSPRTCRNFAELSRR--------GY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            +G   + LY K  P+T  NF  L+          GY Y  S FHRIIK+F++Q             SIYG  F DE   +LKHTG G+LSMANAG +TNGSQFFI     + LD +H +FG V  GM+V+  + +V+T + D+P+  + I
Sbjct:   58 LGRIVMGLYGKTVPKTAENFRALATGKNSDGEDLGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDE-NFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENVKTSRGDKPVEPITI 206          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.527e-23
Identity = 70/154 (45.45%), Postives = 89/154 (57.79%), Query Frame = 2
Query:   53 SDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAEL--SRRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSV--QTDKDDRPI 496
            S DG P       +G   +EL     P+T  NF  L    +G+ Y  S+FHR+I +F+ Q             SIYG  FEDE   +LKHTG GIL MANAGPNTNGSQFFIT A  S LD +H +FG V  GM+V+K+L S+  Q+ K ++ I
Sbjct:   11 SADGQP-------VGRIVMELRSDVVPKTAENFRALCTGEKGFGYKGSRFHRVIPNFMCQGGDFTNHNGTGGKSIYGTKFEDE-NFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEGMDVVKKLESLGSQSGKTNKKI 156          
The following BLAST results are available for this feature:
BLAST of CF417736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
PPIB2_RHIOR3.077e-2438.55Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
CYPX_USEUD3.077e-2442.11Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]
PPID_SCHPO4.019e-2446.2740 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]
PPIB_TREPA6.855e-2440.61Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
PPIB1_RHIOR8.953e-2443.54Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus... [more]
CP20C_ARATH8.953e-2447.45Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
CYP11_CAEEL1.169e-2342.66Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorha... [more]
PPIB_NEUCR1.527e-2342.18Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
PPIB_CRYNE1.527e-2342.00Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIA_BLAGE1.527e-2345.45Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-666 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417736 ID=CF417736; Name=CF417736; organism=Citrus sinensis; type=EST; length=716bp
CTGAGTTTCTGGTAGTGTTGTGGTCTTGAAAGCAACAATAAAGATGCTGG
CAAGTGACGACGGTCCGCCGGAGGTCACTTTAGAAACTTCCATGGGCTCT
TTCACCGTCGAGCTTTACTACAAGCACTCTCCAAGAACTTGCAGGAACTT
TGCTGAACTATCTCGCAGAGGTTATTATAATAACAGCAAATTCCACAGAA
TTATTAAGGATTTTATAGTTCAAGGTGGAGATCCTACCGGGACTGGAAGG
GGAGGAGATTCCATATATGGCCATGTTTTCGAAGATGAAATAAAACCAGA
ATTAAAGCATACTGGAGCTGGGATCTTGTCCATGGCAAATGCTGGTCCAA
ATACAAATGGAAGCCAGTTCTTTATCACTTTGGCGCCTGCTTCACATCTG
GATGGAAAGCACACTATATTTGGAAGAGTATGCAGAGGAATGGAAGTGAT
CAAAAGGCTTGGCAGTGTCCAAACTGATAAAGATGACAGGCCCATCCATG
ACGTTAAGATACTACGGACTTCTGTTAAGGACTGATGCCATGAAACGGTT
ATGGAAACCAACGTTTCCACATGATTTTGGGTGCACTAGAGCCAGTGTTC
AAAAATCTGATTCTGAAAATTTCTAACATCTGATTTTGGATGCACTGTAC
TTTGGTATTTTATTGAAACAGAAGGCAAATATGGATCATTTGGTAATTCT
CGTCTTATTTACCATT
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