CF417739

Overview
NameCF417739
Unique NameCF417739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.093e-39
Identity = 91/196 (46.43%), Postives = 115/196 (58.67%), Query Frame = 3
Query:   96 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLN 683
            FY   C N  +I+  V+Q+   S       ++R+HFHDCFV+GCDGS+LL   A +TS    + +   N S RGFEV++  KA LE ACP  VSCADIL +A+  +V L+GG  W VPLGR DGR +  S  D NLP P  ++   K  F    LN   DLV L G HT G A C     R  NFNGTG PDP+++
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL---AGNTS----ERTAVPNRSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQAS--DVNLPGPSDSVAKQKQDFAAKTLN-TLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSID 226          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.209e-38
Identity = 95/205 (46.34%), Postives = 124/205 (60.49%), Query Frame = 3
Query:   72 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALS-GAHTFGRAQCQFFSQRLFNFNGTGHPDPTLN 683
            S AQL   FY+ TCP+A +I+  V+Q A  +D    A L+RL FHDCFV GCDGSIL+ +  N    D E+F+ A N    GF+V+D  K+ LE  CPG+VSCADI+A+A+  ++  + GP + VP GRRDG  AN   A +NLP    +++ LK +F   GL+D  DLV LS GAHT G   C F   RL         DPT+N
Sbjct:   20 SAAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGN----DDERFA-AGNAGVAGFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHA-KNLPDVQDSINTLKSKFREKGLSDQ-DLVLLSAGAHTIGTTACFFVIPRL------DAQDPTIN 211          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.835e-38
Identity = 85/191 (44.50%), Postives = 113/191 (59.16%), Query Frame = 3
Query:   69 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRL 641
            S+ AQL   FY+ +CP A +I+  V+ N F SD  ITA+ +R+ FHDCFV GCD S+L+D      S   EK S   N S RG+E++D  K  LE+ACP  VSCADI+ +A+  SV L+GGP ++VP GRRDG  +N +  D NLP P   +      F   G+N N  +  + G H+ G A C  F  RL
Sbjct:   17 SALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPS---EK-STGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPN--DVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL 201          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.023e-37
Identity = 89/207 (43.00%), Postives = 119/207 (57.49%), Query Frame = 3
Query:   72 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSA-RGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLN 683
            S AQL  DFY  TCPN   I+   +Q           + +RL+FHDCFVNGCD S++   +A+  +  +EK    N + A  GF+ V   K A+++   C   VSCADIL +A+   VNL+GGP + V LGRRDG +++ S     LP P   L+ L   F   GL+ N D++ALSGAHT G A C     RL+NFN T + DPT+N
Sbjct:   23 SSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVM---IASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPN-DMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTIN 225          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.977e-37
Identity = 89/204 (43.63%), Postives = 121/204 (59.31%), Query Frame = 3
Query:   72 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLN 683
            S+A L   +Y+ +CP A  IIL  ++NA   D ++ A L+R+ FHDCF+ GCD SILLD+  ++    +EK    N  S R F V++  K  LE ACP  VSCAD++AIA+   V LSGGP W+V  GR+DG T +R+   +NLP P   +  L   F   GL+   D+V LSG HT G + C  F  RL NF+     DP++N
Sbjct:   22 SEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSN---QAEKDGPPNI-SVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDG-TISRANETRNLPPPTFNVSQLIQSFAARGLSVK-DMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMN 219          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.889e-37
Identity = 84/195 (43.08%), Postives = 117/195 (60.00%), Query Frame = 3
Query:   96 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTL 680
            +Y + C N  +I+  V+++ + ++      ++R+HFHDCFV GCD S+LL         +SE+ ++ N  S RGF V++  K  LE ACP  VSCADILA+A+   V+L+GGP W VPLGR DGR +  S  +  LP P  ++ + K RF    LN   DLV L+  HT G A C  F  R FN++ TG PDPT+
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLL------AGPNSERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFAEKNLN-TQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTI 222          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.079e-37
Identity = 84/204 (41.18%), Postives = 117/204 (57.35%), Query Frame = 3
Query:   75 QAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLS-GGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLN 683
            + +L  +FY+ +CP A +I+  ++     ++  +   L+R+H+HDCFV GCD S+LLD+VA     + E      N S  GFE++D +K  LE  CP  VSCADIL +A+  +V+     P W V  GR DGR +  + A ++LP+       L+  F    L D  DLVALSGAHT G A C  F +RL NF G G  DP+LN
Sbjct:   43 EGKLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKE---ARPNLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDL-DVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLN 242          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36
Identity = 86/208 (41.35%), Postives = 120/208 (57.69%), Query Frame = 3
Query:   66 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLN 683
            S   AQL   FY  +CPN   I+   ++  F        + +RL FHDCFV GCD SI++ + +     D    S+A +    GF+ V   K A++S   C   VSCADILA+A+ + V L+GGPS+ V LGRRDGR + ++     LP P   L+ L G F+  GL+  TD++ALSGAHT G A C   S+R++NF+ T   DP++N
Sbjct:   21 SCVSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPSERDHPDD--MSLAGD----GFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLS-QTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSIN 221          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 90/208 (43.27%), Postives = 119/208 (57.21%), Query Frame = 3
Query:   66 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLN 683
            SS  AQL  +FY  +CPN   I+   ++  F        + +RL FHDCFV GCD SILL + +     D +  S+A +    GF+ V   K AL+    C   VSCADILA+A+   V L+GGP++ V LGRRDGR +  +    +LP P   LD L   F   GL+  TD++ALSGAHT G A C  FS+R++NF+     DPTLN
Sbjct:   19 SSVFAQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPSEKDHPDDK--SLAGD----GFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLS-QTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLN 219          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36
Identity = 88/202 (43.56%), Postives = 118/202 (58.42%), Query Frame = 3
Query:   84 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMAN-NNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRT-ANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLN 683
            L+ +FY   CP   NII   L+  F  DI + A+++R+HFHDCFV GC+ S+LL   A   S   E+ S+ N     + F V++ ++A ++  C  +VSC+DILA+A+  SV LSGGP + VPLGRRD    A++     NLP PF     L   F N  LN  TDLVALSG HT G A C  F+ RL+      + DPT+N
Sbjct:   44 LSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLL---AGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLN-ITDLVALSGGHTIGIAHCPSFTDRLY-----PNQDPTMN 236          
The following BLAST results are available for this feature:
BLAST of CF417739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER69_ARATH1.093e-3946.43Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER13_ARATH1.209e-3846.34Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER44_ARATH7.835e-3844.50Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER51_ARATH1.023e-3743.00Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER66_ARATH2.977e-3743.63Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER70_ARATH3.889e-3743.08Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER24_ARATH5.079e-3741.18Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER45_ARATH1.478e-3641.35Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER16_ARATH1.930e-3643.27Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER12_ARATH1.930e-3643.56Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-669 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417739 ID=CF417739; Name=CF417739; organism=Citrus sinensis; type=EST; length=691bp
GGAAAATGTCTCCTCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCG
TTTGTGCTTGACGAATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTA
CAACACCACATGCCCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGA
ATGCTTTCAATTCCGATATCCGAATCACTGCCAGCCTCATCAGGCTTCAT
TTTCATGACTGCTTTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAA
CGTTGCCAATGATACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATA
ATAATTCAGCAAGAGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTT
GAGAGTGCCTGTCCTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGC
TTCTGAACAATCCGTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCAC
TGGGAAGAAGAGACGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAAT
CTTCCAACACCATTTCAGACTCTTGATTTGCTCAAAGGCAGATTTACAAA
TGTCGGTCTCAACGACAATACTGATCTGGTTGCACTCTCCGGCGCTCACA
CTTTTGGAAGGGCACAGTGTCAATTTTTCAGCCAAAGATTATTCAATTTC
AATGGAACTGGCCATCCAGACCCAACGCTGAACGCAACTCT
back to top