CF417739

Overview
NameCF417739
Unique NameCF417739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.997e-33
Identity = 78/199 (39.20%), Postives = 116/199 (58.29%), Query Frame = 3
Query:   69 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGH 665
            ++++ LT DFY+ +CP   +II   + N   S     A+ +RL FHDCF NGCD S+L+ + A +T+      +++      GF+VV   K ALE ACP  VSC+DI+A+A    +   GGP + + LGRRD RT+  SL    LP P   +  L  +F++ G +   ++VALSGAHT G + C+ F+ R+   N TG+
Sbjct:   27 AAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGD--GFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQ-EMVALSGAHTIGFSHCKEFTNRVNPNNSTGY 222          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.997e-33
Identity = 83/181 (45.86%), Postives = 116/181 (64.09%), Query Frame = 3
Query:   81 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 620
            QLTP+     C    + +  V+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  N NSARG+EV+   K ++ + CP + VSCADILAIA+  SV   GG +++V LGR D RTAN S A   LP PF  L +   +F++       ++VAL+GAHT G A+C
Sbjct:   75 QLTPE----AC--VFSAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFT-LREMVALAGAHTVGFARC 246          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33
Identity = 84/181 (46.41%), Postives = 114/181 (62.98%), Query Frame = 3
Query:   81 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 620
            QLTP+     C    + + GV+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  N NSARG+EV+   K ++   CP I VSCADILAIA+  SV   GG ++ V LGR D RTAN + A   LP PF  L +   +F +       ++VAL+GAHT G A+C
Sbjct:   74 QLTPE----AC--VFSAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFT-LREMVALAGAHTVGFARC 245          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.407e-33
Identity = 79/188 (42.02%), Postives = 108/188 (57.45%), Query Frame = 3
Query:   78 AQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRL 641
            AQL   FY  TCP A +I+  V+ N ++ +  +TA+L+R+ FHDC V GCD S+L+D     T   SEK S+  N   RGFE++D  K  LE  CP  VSCADI+ IA+  S+ L+GGP + V  GRRDG  +N S  D  L  P  ++      F ++G N +T +  + G HT G A C  F  R+
Sbjct:   20 AQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPT---TERPSEK-SVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPS--DVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI 201          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.884e-32
Identity = 87/196 (44.39%), Postives = 115/196 (58.67%), Query Frame = 3
Query:   63 ESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIAS-EQSVNLSGGP-SWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC-QFFSQRL 641
            ++S    L   +Y  TCP A  I+   ++ A   +    A++IR+ FHDCFV GCD S+LLD      S   EK +  NN S RGFE++DA+K ALE+ACPG+VSCADI+A A+ + S  LS G  S+ +P GR DG  +N S + + L  P   L  L   F   G++   DLV LSGAHT GR+ C  F S RL
Sbjct:   28 QASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD--PTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMS-LEDLVVLSGAHTVGRSHCSSFVSDRL 220          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32
Identity = 76/190 (40.00%), Postives = 111/190 (58.42%), Query Frame = 3
Query:   69 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQR 638
            +S A L+ +FY ++C  A  ++   +++A +SD  I   L+RL FHDCFV GCD S+L+         +S + S   N S  GF V+D  K A+E+ CP  VSCADI+A+A+  +V  +GGP   +P GRRDG+ +  +    N+     TLD +   F++ GL+   DLV LSGAHT G + C  F+ R
Sbjct:   24 TSSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQG-------NSTEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQ-DLVVLSGAHTIGASHCNAFNGR 205          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.096e-31
Identity = 76/201 (37.81%), Postives = 114/201 (56.72%), Query Frame = 3
Query:   84 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLNA 686
            L+ ++Y+  CP+   I++  ++    SD  +  +L+RL FHDC V GCD S+LLD    +    + K       + RGFE++D +K+ +E +CPG VSCADIL  AS  +    GGP W    GRRD + +     ++ +P+  + +  L   F + GLN   DLV LSGAHT G+A C     RL+N+N T   DP+++A
Sbjct:   51 LSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEGTERRSPASK-------TLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDVEK-VPSGRRDVTALLETFQSYGLN-VLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDA 242          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.869e-31
Identity = 71/161 (44.10%), Postives = 102/161 (63.35%), Query Frame = 3
Query:  141 VLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 620
            ++  A  ++ R+ ASLIRLHFHDCFV+GCDG ILL++ AN T    E+ + AN+NS RGF V+D  K   ++ C    VSCAD+LAIA+  +       ++ + LGR+D RTAN + A+  LP PF  L +   +F + G N   ++V L+GAHT G ++C
Sbjct:   79 IVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFT---GEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQR-EMVVLAGAHTVGFSRC 235          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.441e-31
Identity = 82/209 (39.23%), Postives = 113/209 (54.07%), Query Frame = 3
Query:   69 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNV-ANDTSID-SEKFSMANNNSARGFEVVDAMKAALES--ACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGHPDPTLN 683
            ++ AQL  +FY  +CPN   I+  V+Q           + +RL FHDCFVNGCD S+++ +   N    D  +  S+A +    GF+VV   K AL++  +C   VSCADILA+A+   V  + GPS+ V LGR DG  +  +  + NLP P   +  L   F    L    D++ALS AHT G A C     R++NFN T   DPTLN
Sbjct:   22 TTTAQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGD----GFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQE-DMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLN 225          
BLAST of CF417739 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.441e-31
Identity = 76/199 (38.19%), Postives = 117/199 (58.79%), Query Frame = 3
Query:   69 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGH 665
            ++Q++LT +FY+ TCP   +II   + N   ++    A++IRL FHDCF NGCD S+L+ + A +T+      +++      GF+V+   K ALE ACP  VSC+DI+++A+   +   GGP + V LGRRD RT+  SL    LP P   +  +  +F + G     ++VALSGAH+ G + C+ F  R+   N TG+
Sbjct:   16 TAQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGD--GFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVALSGAHSIGFSHCKEFVGRV-GRNNTGY 210          
The following BLAST results are available for this feature:
BLAST of CF417739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER63_ARATH1.997e-3339.20Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER1_SOLLC1.997e-3345.86Suberization-associated anionic peroxidase 1 OS=So... [more]
PERX_SOLTU2.608e-3346.41Suberization-associated anionic peroxidase OS=Sola... [more]
PER8_ARATH3.407e-3342.02Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER2_MAIZE2.884e-3244.39Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER46_ARATH4.919e-3240.00Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER7_ARATH1.096e-3137.81Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PERN_IPOBA1.869e-3144.10Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER73_ARATH2.441e-3139.23Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER31_ARATH2.441e-3138.19Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-669 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417739 ID=CF417739; Name=CF417739; organism=Citrus sinensis; type=EST; length=691bp
GGAAAATGTCTCCTCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTTCGCG
TTTGTGCTTGACGAATCATCATCTCAAGCTCAGCTTACGCCAGATTTTTA
CAACACCACATGCCCTAATGCATCAAACATCATTCTGGGTGTTCTTCAGA
ATGCTTTCAATTCCGATATCCGAATCACTGCCAGCCTCATCAGGCTTCAT
TTTCATGACTGCTTTGTCAACGGCTGTGATGGGTCAATCTTGCTGGACAA
CGTTGCCAATGATACGAGCATAGACAGCGAGAAATTTTCGATGGCAAATA
ATAATTCAGCAAGAGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCCCTT
GAGAGTGCCTGTCCTGGCATTGTTTCCTGTGCTGATATTCTTGCCATTGC
TTCTGAACAATCCGTCAATTTGTCAGGTGGTCCTTCATGGACAGTTCCAC
TGGGAAGAAGAGACGGCAGGACAGCGAACAGGAGCCTTGCAGATCAGAAT
CTTCCAACACCATTTCAGACTCTTGATTTGCTCAAAGGCAGATTTACAAA
TGTCGGTCTCAACGACAATACTGATCTGGTTGCACTCTCCGGCGCTCACA
CTTTTGGAAGGGCACAGTGTCAATTTTTCAGCCAAAGATTATTCAATTTC
AATGGAACTGGCCATCCAGACCCAACGCTGAACGCAACTCT
back to top