CF417740 | Citrus Genome Database

Overview


Name	CF417740
Unique Name	CF417740
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	676

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig482	contig	Csv1_Contig482:1..676.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: TG125_CAEEL (WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.047e-27
Identity = 69/226 (30.53%), Postives = 117/226 (51.77%), Query Frame = 3

Query:    3 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNM-IYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            L CTL  H   I S K++  G YL T S DKT  +W++     ++    H     D+ W ++     S++D+  + + +I  +R  KT  GH   V C  ++P  SL+ S S D + +IW++K    +  L  HS  +  + ++  GS         ++AS S+D  V++WD   G+ + +L +    PV  + FSPNG+Y+ + +LD ++ +W   +GK +K YT
Sbjct:   79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGS---------LIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT 295

HSP 2 Score: 87.0409 bits (214), Expect = 9.529e-17
Identity = 58/215 (26.98%), Postives = 99/215 (46.05%), Query Frame = 3

Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF-ATSSTDNMIYVCKIGENRPIKTFAGHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI--RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSL--DKSMHIW 638
            TL  H   +F   +N +   +++GS D++  +WDVKT    +    HS P   V +  + S  A+ S D ++ +      + IKT    +   V  VK+ P G  + + + D T K+W+  + K +     H    Y I   +S TG           + S S D  + +W+++  +++  L GH +PV +    P    +ASG+L  D  +HIW
Sbjct:  166 TLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKW--------IISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372

[Close]

BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WDR5B_MOUSE (WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27
Identity = 68/226 (30.09%), Postives = 113/226 (50.00%), Query Frame = 3

Query:    3 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLA-FSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            L+ TL+ H   I S+K++  G++L + + D   I+W       K+    HS    DV W ++ S   ++S D  + V  +   + +KT  GH   V C  ++P  +L+ S S D + KIW +K  K +  L  HS  I  + ++  GS         ++ S S+D   ++WD   G+ L +L     P  S   FSPNG+Y+ + +LD ++ +W    G+ +KTYT
Sbjct:   31 LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGS---------LIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT 247

HSP 2 Score: 84.3445 bits (207), Expect = 6.176e-16
Identity = 58/218 (26.61%), Postives = 105/218 (48.17%), Query Frame = 3

Query:    6 KC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATS-STDNMIYVCKIGENRPIKTFAGHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSL--DKSMHIWS 641
            KC  TL  H   +F   +N   + +++GS D++  +W+VKT +  +    HS P   V++  N S   S S D +  +      + ++T A      V+ VK+ P G  + + + D T K+W+  + + +     H  E Y +  S + +G         + S S D+ V +W+++  +++  L GH + V S A  P    +AS +L  DK++ +WS
Sbjct:  114 KCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRK------WVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWS 325

[Close]

BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27
Identity = 64/226 (28.32%), Postives = 118/226 (52.21%), Query Frame = 3

Query:    3 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATS-STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            LK TL+ H   + ++K++  G++L + S DK   +W     ++++    H     DV W ++     S S D  + V ++   + +KT  GH   V C  ++P  +L+ S S D + +IW+++  K +  L  HS  +  + ++  GS         ++ S+S+D   ++WD   G+ L +L +    PV  + FSPNG+Y+ + +LD ++ +W   +GK +KTYT
Sbjct:   64 LKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS---------LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 280

HSP 2 Score: 83.9593 bits (206), Expect = 8.066e-16
Identity = 56/215 (26.05%), Postives = 101/215 (46.98%), Query Frame = 3

Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSST-DNMIYVCKIGENRPIKTFAGHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI--RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSL--DKSMHIW 638
            TL  H   +F   +N + + +++GS D++  +WDV+T +  +    HS P   V +  + S   SS+ D +  +      + +KT        V+ VK+ P G  + + + D T K+W+  + K +     H  E Y I   +S TG           + S S D+ V +W+++  +++  L GH + V   A  P    +AS +L  DK++ +W
Sbjct:  151 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW--------IVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357

[Close]

BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WDR5B_RAT (WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.016e-26
Identity = 67/226 (29.65%), Postives = 113/226 (50.00%), Query Frame = 3

Query:    3 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLA-FSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            L+ TL+ H   I S+K++  G++L + + D   I+W     + K+    HS    DV W ++ S   ++S D  + +  +   + +KT  GH   V C  ++P  +L+ S S D + KIW +K  K +  L  HS  I  + +   GS         ++ S S+D   ++WD   G+ L +L     P  S   FSPNG+Y+ + +LD ++ +W    G+ +KTYT
Sbjct:   31 LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGKCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNGS---------LIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYT 247

HSP 2 Score: 85.1149 bits (209), Expect = 3.621e-16
Identity = 60/218 (27.52%), Postives = 104/218 (47.71%), Query Frame = 3

Query:    6 KC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATS-STDNMIYVCKIGENRPIKTFAGHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSL--DKSMHIWS 641
            KC  TL  H   +F   +N   + +++GS D++  +W+VKT +  +    HS P   V +  N S   S S D +  +      + ++T A      V+ VK+ P G  + + + D T K+W+  + + +     H  E Y I  S + +G         + S S D+ V +W+++  +++  L GH + V S A  P    +AS +L  DK++ IWS
Sbjct:  114 KCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYTGHKNEKYCIFASFSVTGRK------WVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTENIIASAALENDKTIKIWS 325

[Close]

BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WDR69_XENTR (WD repeat-containing protein 69 OS=Xenopus tropicalis GN=wdr69 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.263e-26
Identity = 68/222 (30.63%), Postives = 111/222 (50.00%), Query Frame = 3

Query:   15 LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS--FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            L  H  P+ ++ +NK G   +TGS D+T  VWD  + E     E H      + + N      AT S D    +      +   TF GH  E+ C+ ++P  +L+A+ S D TAK+W+++  +    L  H+ EI ++ ++ TG           L + SFD TV +W++  G+ +++L GHR  + S  F+ +   +A+ S+DKS  +W    GK V T T
Sbjct:   88 LRAHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDR---------LITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLT 300

HSP 2 Score: 106.301 bits (264), Expect = 1.518e-22
Identity = 67/210 (31.90%), Postives = 102/210 (48.57%), Query Frame = 3

Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF-ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIW 638
            TLS H   I SL +N  GD L+TGS D T  VW++ +         H G      +  + S  AT+S D    +      + + T  GH+ EV  V +D TG L+A+ S D TA++++    K +  L  H  EI  I ++  G+          + +AS D T +LW+   G+ L  L GH + ++S AF+  G  + +GS D +  IW
Sbjct:  214 TLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNR---------ILTASSDKTSRLWNPHTGECLQVLKGHTDEIFSCAFNYEGNTIITGSKDNTCRIW 414

HSP 3 Score: 100.138 bits (248), Expect = 1.088e-20
Identity = 60/223 (26.91%), Postives = 105/223 (47.09%), Query Frame = 3

Query:    6 KC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVK 665
            KC  T   H   I  L +N +   + TGS D TA +WD+++ E       H+   + + +        T S D+ + V +I   R I T  GH+GE++  +++   SL+A+ S D + K+W+    K V  L  H  E+  + +  TG          ++A+AS D T +++     K L  L GH   +  + F+  G  + + S DK+  +W+   G+ ++
Sbjct:  168 KCYHTFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQ---------LVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRILTASSDKTSRLWNPHTGECLQ 381

[Close]

BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.263e-26
Identity = 71/232 (30.60%), Postives = 115/232 (49.57%), Query Frame = 3

Query:   15 LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLK-----------EGKIVKTYT 674
            L  H GP++S ++      LL+ S D +   WD+ +      ++ H+ P  DVD    ++ FA+ S D    +       P++ +AGH  +V+CVK+ P  + LA+ S D T ++W+ +Q   V     H   + ++ +SP G           LASA  D  +KLWD+  G L   L GH + + SLAFSP+   +AS S+D S+ +W ++            G++V  YT
Sbjct:  338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGK---------YLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYT 560

HSP 2 Score: 74.3294 bits (181), Expect = 6.391e-13
Identity = 48/170 (28.24%), Postives = 76/170 (44.71%), Query Frame = 3

Query:  255 IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP----TGSGTNNPNQQL-----------------------------ILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVK 665
            +K   GH G V   ++    S L SCS+D++ + W++         + H+  ++ +  SP      SG+++   +L                              LA+ S D TV+LW  + G  +    GHR PV SL+FSPNG+YLAS   D+ + +W L  G + K
Sbjct:  335 MKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFK 504

[Close]

BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WDR69_XENLA (WD repeat-containing protein 69 OS=Xenopus laevis GN=wdr69 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.955e-26
Identity = 68/222 (30.63%), Postives = 111/222 (50.00%), Query Frame = 3

Query:   15 LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS--FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            L  H  P+ ++ +NK G   +TGS D+T  VWD  + E     E H      + + N      AT S D    +      +   TF GH  E+ C+ ++P  +L+A+ S D TAK+W+++  +    L  H+ EI ++ ++ TG           L + SFD TV +W++  G+ +++L GHR  + S  F+ +   +A+ S+DKS  +W    GK V T T
Sbjct:   88 LRAHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDR---------LITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLT 300

HSP 2 Score: 107.842 bits (268), Expect = 5.216e-23
Identity = 68/210 (32.38%), Postives = 101/210 (48.10%), Query Frame = 3

Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF-ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIW 638
            TLS H   I SL +N  GD L+TGS D T  VW++ +         H G      +  + S  AT+S D    +      + + T  GH  EV  V +D TG L+A+ S D TA++++    K +  L  H  EI  I ++  G+          + +AS D T +LWD   G+ L  L GH + ++S AF+  G  + +GS D +  IW
Sbjct:  214 TLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNR---------IVTASSDKTSRLWDPHTGECLQVLKGHTDEIFSCAFNYEGNTIITGSKDNTCRIW 414

HSP 3 Score: 99.7525 bits (247), Expect = 1.421e-20
Identity = 60/223 (26.91%), Postives = 104/223 (46.64%), Query Frame = 3

Query:    6 KC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVK 665
            KC  T   H   I  L +N +   + TGS D TA +WD+++ E       H+   + + +        T S D+ + V +I   R I T  GH+GE++  +++   SL+A+ S D + K+W+    K V  L  H  E+  + +  TG          ++A+AS D T +++     K L  L GH   +  + F+  G  + + S DK+  +W    G+ ++
Sbjct:  168 KCYHTFRGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDVTFDSTGQ---------LVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKTSRLWDPHTGECLQ 381

[Close]

BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WDR69_HUMAN (WD repeat-containing protein 69 OS=Homo sapiens GN=WDR69 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.955e-26
Identity = 67/222 (30.18%), Postives = 112/222 (50.45%), Query Frame = 3

Query:   15 LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS--FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            L  H  P+ ++  NK G   +TGS D+T  +WD  + E     E H      + + N      AT S D    +  +   +   TF GH  E+ C+ ++P  +L+A+ S D TAK+W+++  + V+ LR HS EI ++ ++ +G           + + SFD TV +WD + G+ +  L GH   + S +F+ +   + +GS+DK+  +W    GK V T T
Sbjct:   88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDR---------IITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLT 300

HSP 2 Score: 106.301 bits (264), Expect = 1.518e-22
Identity = 66/212 (31.13%), Postives = 100/212 (47.17%), Query Frame = 3

Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE---NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIW 638
            TL  H   I SL +N  GD ++TGS D T +VWD  T         H        +  + S     T +M   CK+ +    + + T  GH  E+    +D TG L+A+ S D TA+I++    K +  L  H  EI  I ++P G+          L + S D T ++WD + G+ L  L GH + ++S AF+  G  + +GS D +  IW
Sbjct:  214 TLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLIL--TGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNH---------LLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414

HSP 3 Score: 98.2117 bits (243), Expect = 4.133e-20
Identity = 61/223 (27.35%), Postives = 101/223 (45.29%), Query Frame = 3

Query:    6 KC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVK 665
            KC  T   H   I  L +N +   + TGS D TA +WD++  E       HS   + + +  +     T S D+ + V      R +    GH  E++   ++   SL+ + S D T K+W+    K V  L  H  EI    +  TG          ++A+AS D T +++     K +  L GH   +  ++F+P G +L +GS DK+  IW  + G+ ++
Sbjct:  168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGK---------LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQ 381

HSP 4 Score: 77.0258 bits (188), Expect = 9.860e-14
Identity = 46/150 (30.67%), Postives = 73/150 (48.67%), Query Frame = 3

Query:  234 KIGENRP-----IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668
            K+G+N        K    H   +  V  + +GS   + S D T K+W+    + ++ L  H   +Y I +       NNP    I A+ SFD T KLW VE GK  ++  GH   +  L+F+P    +A+GS+D +  +W ++ G+ V T
Sbjct:   73 KLGQNSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAF-------NNPYGDKI-ATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYT 214

[Close]

BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WDR69_BOVIN (WD repeat-containing protein 69 OS=Bos taurus GN=WDR69 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26
Identity = 66/222 (29.73%), Postives = 112/222 (50.45%), Query Frame = 3

Query:   15 LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS--FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            L  H  P+ ++  NK G   +TGS D+T  +WD  + E     E H      + + N      AT S D    +  +   +   TF GH  E+ C+ ++P  +L+A+ S D TAK+W+++  + V  L  HS EI ++ ++ +G+          + + SFD TV +W+ + G+ +Y+L GH   + S  F+ +   + +GS+DK+  +W    GK V T T
Sbjct:   88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNR---------IITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLT 300

HSP 2 Score: 101.293 bits (251), Expect = 4.882e-21
Identity = 64/212 (30.19%), Postives = 101/212 (47.64%), Query Frame = 3

Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE---NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIW 638
            TL+ H   I SL +N  G+ ++TGS D T  VW+  T         H        +  + S     T +M   CK+ +    + + T  GH  E+    +D TG L+A+ S D TA+I++    + V  L  H  EI  I ++P G+          L + S D T ++WD + G+ L  L GH + ++S AF+  G+ + +GS D +  IW
Sbjct:  214 TLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLIL--TGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNR---------LLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414

HSP 3 Score: 95.1301 bits (235), Expect = 3.499e-19
Identity = 61/223 (27.35%), Postives = 104/223 (46.64%), Query Frame = 3

Query:    6 KC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVK 665
            KC  T   H   I  L +N +   + TGS D TA +WD+++ E       HS   + + +  + +   T S D+ + V +    R + T  GH  E++   ++   SL+ + S D T K+W+    K V  L  H  EI    +  TG          ++A+AS D T +++     + +  L GH   +  ++F+P G  L +GS DK+  IW  + G+ ++
Sbjct:  168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGK---------LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQ 381

HSP 4 Score: 81.2629 bits (199), Expect = 5.228e-15
Identity = 63/232 (27.16%), Postives = 100/232 (43.10%), Query Frame = 3

Query:    3 LKCTLSKHKGPIFSLKWNKKG-------DYL-LTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            LK  L ++  P   L++ K G       D L L  S D +A+V +++  E          P +     + V        N +      +    K    H   +  V  + +GS   + S D T K+W+    + +H L  H   +Y I +       NNP    I A+ SFD T KLW VE GK  ++  GH   +  L+F+P    +A+GS+D +  +W ++ G+ V T T
Sbjct:    3 LKSLLLRYYPPGIMLEYEKSGQLKTKSIDLLDLDPSTDVSALVEEIQKAE----------PLITASRSDQVKLLIQRLQNKLGQHSNHKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAF-------NNPYGDKI-ATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLT 216

[Close]

BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: YH92_CAEEL (Uncharacterized WD repeat-containing protein ZC302.2 OS=Caenorhabditis elegans GN=ZC302.2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.598e-26
Identity = 69/222 (31.08%), Postives = 110/222 (49.55%), Query Frame = 3

Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF-ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTY 671
            T+S H   +  +K++  G YL TGS DK   VW+     + Q    H     D  W +N  F A++S D  + +  +     ++T  GH   V C  ++P  SL+AS   D T ++W+ K    V  +  HS  I +I ++  G+          +A++S+D  +++WD   G  L +L +    PV  + FSPNG+YL S  LD S+ +W  K+ K +K Y
Sbjct:  208 TISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGN---------TMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYY 420

HSP 2 Score: 85.5001 bits (210), Expect = 2.772e-16
Identity = 51/155 (32.90%), Postives = 76/155 (49.03%), Query Frame = 3

Query:  201 TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVK 665
            T+S+  +    + GE   +KT +GH   V+ +K+   G  L + S D   K+WN     Y+  L  H   I    WS         N Q I ASAS D+TVK++DV  G  L ++ GH   V+  +F+P    +AS   D+++ +W  K G  VK
Sbjct:  188 TTSSSGITKKPENGEFSLVKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFSWS--------SNSQFI-ASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVK 333

HSP 3 Score: 71.2478 bits (173), Expect = 5.411e-12
Identity = 55/213 (25.82%), Postives = 91/213 (42.72%), Query Frame = 3

Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSL--DKSMHIW 638
            T+  H   +F   +N +   + +   D+T  VWD KT    +    HS P   + + ++ +  ATSS D  I V        +KT        V  V + P G  L S   D + K+W+ K+ K +     H  + Y +      +  + P  + I+ S S D  + +W ++  +++  L GH  PV +    P    +ASG L  D  + IW
Sbjct:  292 TMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYNGHKNKKYCLF-----ANMSVPLGKHII-SGSEDGRILVWSIQTKQIVQILEGHTTPVLATDSHPTLNIIASGGLEPDNVIRIW 498

The following BLAST results are available for this feature:

BLAST of CF417740 vs. ExPASy Swiss-Prot

BLAST of CF417740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466


Match Name	E-value	Identity	Description
TG125_CAEEL	2.047e-27	30.53	WD repeat-containing protein tag-125 OS=Caenorhabd...	[more]
WDR5B_MOUSE	5.954e-27	30.09	WD repeat-containing protein 5B OS=Mus musculus GN...	[more]
WDS_DROME	7.777e-27	28.32	Protein will die slowly OS=Drosophila melanogaster...	[more]
WDR5B_RAT	1.016e-26	29.65	WD repeat-containing protein 5B OS=Rattus norvegic...	[more]
WDR69_XENTR	2.263e-26	30.63	WD repeat-containing protein 69 OS=Xenopus tropica...	[more]
TAF5L_MOUSE	2.263e-26	30.60	TAF5-like RNA polymerase II p300/CBP-associated fa...	[more]
WDR69_XENLA	2.955e-26	30.63	WD repeat-containing protein 69 OS=Xenopus laevis ...	[more]
WDR69_HUMAN	2.955e-26	30.18	WD repeat-containing protein 69 OS=Homo sapiens GN...	[more]
WDR69_BOVIN	5.041e-26	29.73	WD repeat-containing protein 69 OS=Bos taurus GN=W...	[more]
YH92_CAEEL	8.598e-26	31.08	Uncharacterized WD repeat-containing protein ZC302...	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_115000-670 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F07 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417740 ID=CF417740; Name=CF417740; organism=Citrus sinensis; type=EST; length=676bp
ATCTGAAGTGTACCTTGAGTAAACATAAAGGACCCATATTTTCCCTTAAG
TGGAACAAGAAGGGTGATTACCTTCTCACCGGAAGCTGTGATAAAACTGC
AATAGTATGGGATGTGAAGACAGAGGAATGGAAACAGCAATTTGAATTTC
ATTCAGGTCCAACGCTTGATGTTGACTGGCGCAATAATGTTTCATTTGCC
ACAAGCTCGACAGACAACATGATATATGTGTGTAAAATTGGGGAAAACCG
CCCTATTAAAACTTTTGCAGGGCATCAGGGTGAGGTTAACTGTGTTAAAT
GGGATCCAACAGGTTCGTTGTTGGCCTCTTGCTCAGATGACGTCACTGCC
AAGATATGGAACATGAAGCAGGACAAGTATGTTCATGATTTGAGAGAGCA
TTCCAAGGAGATATATACTATCAGATGGAGTCCTACAGGATCAGGGACGA
ATAATCCTAACCAGCAATTGATCCTAGCGAGTGCTTCTTTCGACTCTACA
GTAAAGCTTTGGGATGTAGAGCTAGGGAAACTCCTCTACAGTTTGAATGG
ACACAGGGAACCTGTGTACTCGCTCGCATTTAGCCCTAATGGGGAGTATT
TAGCAAGTGGATCTCTTGATAAATCCATGCACATCTGGTCACTGAAGGAA
GGAAAGATTGTGAAGACGTACACTGG