CF417740

Overview
NameCF417740
Unique NameCF417740
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.612e-24
Identity = 64/227 (28.19%), Postives = 119/227 (52.42%), Query Frame = 3
Query:    3 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-REPVYSLAFSPNGEYLASGSLDKSMHIWSLKEG-KIVKTYT 674
            LK TL  H   I S+K++  G +L + S DKT  +W     ++++  E H     D+ W +++    ++S D  I +  +   + +KT  GH+  V  V ++P  +L+ S S D   +IW++   +    +  HS  +  + ++  G+         ++ S S+D TV++WD   G+LL +++    + V  + FSPNG+++ +G+LD ++ +WS     K +KTYT
Sbjct:   38 LKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGT---------LVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYT 255          

HSP 2 Score: 80.8777 bits (198), Expect = 6.829e-15
Identity = 54/214 (25.23%), Postives = 104/214 (48.60%), Query Frame = 3
Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQG-EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY-VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSL--DKSMHIW 638
            TL  HK  +F + +N + + +++GS D+   +WDV T E  +    HS P   V + R+     + S D  + +      + + T +   G EV+ VK+ P G  + + + D T ++W+   +K  +     H  E Y I        T +      + + S D+ + +++++  +++ +L GH + V ++A  P    +ASG+L  D+S+ IW
Sbjct:  125 TLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCI------FSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332          
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: LIS1_XENTR (Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 3.612e-24
Identity = 69/231 (29.87%), Postives = 111/231 (48.05%), Query Frame = 3
Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD-WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP----------TGSGTNNPNQQ-LILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668
            TL  H   +  + ++  G  L + S D T  +WD +  E  +    H      V    N     ++S D  I + ++     +KTF GH+  V  V+ +  G+L+ASCS+D T ++W +   +   +LREH   +  I W+P          TGS T    +    L S S D T+K+WD+ +G  L +L GH   V  + F P G+++ S + DK++ IW  K  + +KT
Sbjct:  145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKT 375          

HSP 2 Score: 89.3521 bits (220), Expect = 1.920e-17
Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 3
Query:  249 RPIKTFA--GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            RP + +A  GH+  V  V + P  S++ + S+D T K+W+ +   +   L+ H+  +  I +  +G          +LAS S D T+KLWD +  + + +++GH   V S+A  PNG+++ S S DK++ +W ++ G  VKT+T
Sbjct:   97 RPPEKYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK---------LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231          
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: LIS1A_XENLA (Lissencephaly-1 homolog A OS=Xenopus laevis GN=pafah1b1-A PE=2 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 3.612e-24
Identity = 69/231 (29.87%), Postives = 111/231 (48.05%), Query Frame = 3
Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD-WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP----------TGSGTNNPNQQ-LILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668
            TL  H   +  + ++  G  L + S D T  +WD +  E  +    H      V    N     ++S D  I + ++     +KTF GH+  V  V+ +  G+L+ASCS+D T ++W +   +   +LREH   +  I W+P          TGS T    +    L S S D T+K+WD+ +G  L +L GH   V  + F P G+++ S + DK++ IW  K  + +KT
Sbjct:  145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKT 375          

HSP 2 Score: 89.3521 bits (220), Expect = 1.920e-17
Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 3
Query:  249 RPIKTFA--GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            RP + +A  GH+  V  V + P  S++ + S+D T K+W+ +   +   L+ H+  +  I +  +G          +LAS S D T+KLWD +  + + +++GH   V S+A  PNG+++ S S DK++ +W ++ G  VKT+T
Sbjct:   97 RPPEKYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK---------LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231          
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.718e-24
Identity = 66/222 (29.73%), Postives = 107/222 (48.20%), Query Frame = 3
Query:   15 LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS--FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            L  H  P+ ++  NK G   +TGS D+T  VWD  + E     E H      + + N      AT S D    +      +   TF GH  E+ C+ ++P  +++A+ S D TAK+W+++  + V  L  H  EI ++ +  +G           + + SFD TV +WD   G+ +++L GH   + S  FS +   + +GS+DK+  +W    GK V T T
Sbjct:   88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDR---------IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLT 300          

HSP 2 Score: 108.612 bits (270), Expect = 3.058e-23
Identity = 66/210 (31.43%), Postives = 99/210 (47.14%), Query Frame = 3
Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFA-TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIW 638
            TL+ H   I SL ++  GD ++TGS D T +VWD  T         H        +  + S   T S D    +      + + T  GH  E+    +D TG L+A+ S D TA+++N    K +  L  H  EI  I ++P G+          L + S D T ++WDV+ G+ L  L GH + ++S AF+  G  + +GS D S  IW
Sbjct:  214 TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNR---------LLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414          

HSP 3 Score: 93.2041 bits (230), Expect = 1.330e-18
Identity = 60/223 (26.91%), Postives = 101/223 (45.29%), Query Frame = 3
Query:    6 KC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVK 665
            KC  T   H   I  L +N +   + TGS D TA +WD+++ E       H    + + +  +     T S D+ + V      R + T  GH  E++   +    SL+ + S D T  +W+    K V  L  H  EI    +  TG          ++A+AS D T ++++    K +  L GH   +  ++F+P G  L +GS DK+  IW ++ G+ ++
Sbjct:  168 KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK---------LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQ 381          

HSP 4 Score: 78.9518 bits (193), Expect = 2.595e-14
Identity = 44/139 (31.65%), Postives = 67/139 (48.20%), Query Frame = 3
Query:  258 KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            K    H   +  V  +  GS   + S D T K+W+    + +H L  H   +Y I +       NNP    I A+ SFD T KLW  E GK  ++  GH   +  L+F+P    +A+GS+D +  +W ++ G+ V T T
Sbjct:   86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAF-------NNPYGDKI-ATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLT 216          
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: TG125_CAEBR (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae GN=tag-125 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.718e-24
Identity = 63/222 (28.38%), Postives = 112/222 (50.45%), Query Frame = 3
Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTY 671
            T+  H   I ++K++  G +L T S DKT  +W++     ++    H     D  W  ++ S  T+S D  + + ++   +  KT  GH   V C  ++P  SL+ S S D + +IW+++    V  L  HS  +  + ++  GS         ++ S S+D  V++WD   G+ + +L +    PV  + FSPNG+Y+ S +LD ++ +W   +GK +K Y
Sbjct:   74 TIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGS---------LITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQY 286          

HSP 2 Score: 83.9593 bits (206), Expect = 8.066e-16
Identity = 45/138 (32.61%), Postives = 65/138 (47.10%), Query Frame = 3
Query:  255 IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668
            I T  GH   ++ VK+ P G  L + S D T KIWNM        L  H   +    WS              + +AS D T+K+++V   K+  +L GH   V+   F+P    + SGS D+S+ IW ++ G  VKT
Sbjct:   72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKS---------IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKT 200          

HSP 3 Score: 83.1889 bits (204), Expect = 1.376e-15
Identity = 57/215 (26.51%), Postives = 100/215 (46.51%), Query Frame = 3
Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATS-STDNMIYVCKIGENRPIKTFAGHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI--RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSL--DKSMHIW 638
            TL  H   +F   +N +   +++GS D++  +WDV+T    +    HS P   V +  + S  TS S D ++ +      + +KT    +   V  VK+ P G  + S + D T K+W+  + K +   + H    Y I   +S TG           + S S D  + +W+++  +++ SL GH + V +    P    +ASG+L  D ++ IW
Sbjct:  158 TLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKW--------IISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364          
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: TAF5_SCHPO (Transcription initiation factor TFIID subunit 5 OS=Schizosaccharomyces pombe GN=taf5 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.048e-24
Identity = 60/211 (28.44%), Postives = 105/211 (49.76%), Query Frame = 3
Query:   15 LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSL 644
            L  H GP++   ++    YLL+ S D +A +W V T+     ++ H+GP  DV +      FAT+S D    +       P++ FAGH  +V+CV + P  + + + S D T ++W++ +   V     H++ +  +  +P G           +ASA  +  + LWD+  G+ + ++ GHR  +YSL+FS     L SG  D ++  W +
Sbjct:  375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGH---------TMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576          

HSP 2 Score: 82.4185 bits (202), Expect = 2.347e-15
Identity = 50/174 (28.74%), Postives = 84/174 (48.28%), Query Frame = 3
Query:  150 HSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668
            HSGP     +  +N    + S D    +  +     +  + GH G V  V + P G   A+ S D TA++W+     +++ LR     ++    S     T +PN   +L  +S D T +LWDV  G  +   NGH +PV ++A +P+G  +AS   +  +H+W +  G+ +KT
Sbjct:  378 HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCD---HIYPLR-----VFAGHLSDVDCVTFHPNSAYVLTGSS-DKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKT 542          

HSP 3 Score: 68.1662 bits (165), Expect = 4.580e-11
Identity = 36/133 (27.07%), Postives = 61/133 (45.86%), Query Frame = 3
Query:  273 HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTY 671
            H G V    + P    L SCS+D +A++W++     +   + H+  ++ + + P G            A+AS D T +LW  +    L    GH   V  + F PN  Y+ +GS DK+  +W +  G  V+ +
Sbjct:  378 HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGH---------YFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVF 501          
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: LIS1B_DANRE (Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 1.051e-23
Identity = 67/231 (29.00%), Postives = 111/231 (48.05%), Query Frame = 3
Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD-WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS------GTNNPNQQL-----ILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668
            TL  H   +  + +++ G  L + S D T  +WD +  E  +    H      V    N     ++S D  + + ++     +KTF GH+  V  V+ +  G+LLASCS+D T ++W +   +   +LREH   +  I W+P  +       T + N++       L S S D T+K+WD+  G  L +L GH   V  + F P G ++ S + DK++ IW  K  + +KT
Sbjct:  145 TLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKT 375          

HSP 2 Score: 94.3597 bits (233), Expect = 5.968e-19
Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 3
Query:  249 RPIKTFA--GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            RP + +A  GH+  V  V + P  SL+ S S+D T K+W+ +   +   L+ H+  +  I +  TG          +LAS S D T+KLWD +  + + +++GH   V S+A  PNG+++ S S DK+M +W +  G  VKT+T
Sbjct:   97 RPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK---------LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFT 231          
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.373e-23
Identity = 66/216 (30.56%), Postives = 109/216 (50.46%), Query Frame = 3
Query:   24 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF-ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668
            HK  + S++++  G+ L + S D+T  +W         +F+ H+ P   VD+  +  F AT+S D  I V  +   R + +   H   V C K+ P G L+ SCS+D T KIW+    + V++  +       + ++P+G+          +ASA  D TVK+WDV + KLL     H   V  ++F P+  YL + S D ++ I  L EG+++ T
Sbjct:   59 HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGT---------CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYT 265          

HSP 2 Score: 84.7297 bits (208), Expect = 4.729e-16
Identity = 50/217 (23.04%), Postives = 100/217 (46.08%), Query Frame = 3
Query:   24 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF-ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTY 671
            HK  I SL  +  G  L T S D   ++W+ K      ++  H      V +  + +  A++S D  + +    +      F  H   V  V +   G  LA+ S+D + K+W+M + ++++ L  H+  +   ++SP G          ++ S S D T+K+WD    + + + +        + F+P+G  +AS   D+++ +W ++  K+++ Y
Sbjct:   17 HKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGR---------LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 224          

HSP 3 Score: 79.337 bits (194), Expect = 1.987e-14
Identity = 49/182 (26.92%), Postives = 85/182 (46.70%), Query Frame = 3
Query:  132 KQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            ++ F+ H      +D   N    AT+S D  + +     +     + GH+  V  V++ P G+LLAS S D T ++W   +     + + H+  + ++ +S  G           LA+AS D ++K+W +   + LYSL  H   V    FSP+G  + S S DK++ IW     + V  ++
Sbjct:   11 ERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ---------FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183          

HSP 4 Score: 70.0922 bits (170), Expect = 1.205e-11
Identity = 42/175 (24.00%), Postives = 84/175 (48.00%), Query Frame = 3
Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL 533
            +L +H   +   K++  G  +++ S DKT  +WD   ++    F    G    VD+  +    A++ +D  + V  +  N+ ++ +  H G VNC+ + P+ + L + S D T KI ++ + + ++ L+ H+  ++T+ +S  G          + AS   D+ V LW     +L
Sbjct:  139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGE---------LFASGGADTQVLLWRTNFDEL 304          
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WD51A_MOUSE (WD repeat-containing protein 51A OS=Mus musculus GN=Wdr51a PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.342e-23
Identity = 63/216 (29.17%), Postives = 102/216 (47.22%), Query Frame = 3
Query:   24 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668
            HK  +  + ++  G  L +GS DKT  +W    +     F  H+     V +  +  S  T+S D  + V      R + +   H   V C K+ P G L+ S SDD T K+W+    + +H   EH   +  + + P+G+          +A+A  D+TVK+WD    +LL     H   V +L+F P+G YL + S D ++ I  L EG+++ T
Sbjct:   60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGT---------CIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYT 266          

HSP 2 Score: 87.4261 bits (215), Expect = 7.296e-17
Identity = 51/217 (23.50%), Postives = 99/217 (45.62%), Query Frame = 3
Query:   24 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTY 671
            H+  +  + ++    +L +GS D T ++W +K +    +F  H      V++  +    A+ S D  + +           F  H   V  V +   G  L + SDD T K+W+  + +++  L +H   +   ++SP G          ++ SAS D TVKLWD    + ++S   H   V  + F P+G  +A+  +D ++ +W  +  ++++ Y
Sbjct:   18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGR---------LIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHY 225          

HSP 3 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 54/183 (29.51%), Postives = 86/183 (46.99%), Query Frame = 3
Query:  132 KQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIW--NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTY 671
            ++ F+ H      VD+  N    A+ S D+ + +  +        F GH+  V CV + P+G LLAS S D T +IW  N+K +  V   R H+  + ++ +   G           L +AS D TVK+W     + L+SL  H   V    FSP+G  + S S DK++ +W     + + +Y
Sbjct:   12 ERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQS---------LVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSY 183          
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: LIS1_RAT (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.216e-23
Identity = 68/231 (29.44%), Postives = 109/231 (47.19%), Query Frame = 3
Query:   12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD-WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP----------TGSGTNNPNQQ-LILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668
            TL  H   +  + ++  G  L + S D T  +WD +  E  +    H      V    N     ++S D  I + ++     +KTF GH+  V  V+ +  G+L+ASCS+D T ++W +   +   +LREH   +  I W+P          TGS T    +    L S S D T+K+WDV  G  L +L GH   V  + F   G+++ S + DK++ +W  K  + +KT
Sbjct:  145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT 375          

HSP 2 Score: 90.5077 bits (223), Expect = 8.618e-18
Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 3
Query:  249 RPIKTFA--GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674
            RP + +A  GH+  V  V + P  S++ S S+D T K+W+ +   +   L+ H+  +  I +  +G          +LAS S D T+KLWD +  + + +++GH   V S+A  PNG+++ S S DK++ +W ++ G  VKT+T
Sbjct:   97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK---------LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231          
The following BLAST results are available for this feature:
BLAST of CF417740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
WDR5_DICDI3.612e-2428.19WD repeat-containing protein 5 homolog OS=Dictyost... [more]
LIS1_XENTR3.612e-2429.87Lissencephaly-1 homolog OS=Xenopus tropicalis GN=p... [more]
LIS1A_XENLA3.612e-2429.87Lissencephaly-1 homolog A OS=Xenopus laevis GN=paf... [more]
WDR69_RAT4.718e-2429.73WD repeat-containing protein 69 OS=Rattus norvegic... [more]
TG125_CAEBR4.718e-2428.38WD repeat-containing protein tag-125 OS=Caenorhabd... [more]
TAF5_SCHPO8.048e-2428.44Transcription initiation factor TFIID subunit 5 OS... [more]
LIS1B_DANRE1.051e-2329.00Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1... [more]
WD51B_PONAB1.373e-2330.56WD repeat-containing protein 51B OS=Pongo abelii G... [more]
WD51A_MOUSE2.342e-2329.17WD repeat-containing protein 51A OS=Mus musculus G... [more]
LIS1_RAT5.216e-2329.44Platelet-activating factor acetylhydrolase IB subu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-670 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417740 ID=CF417740; Name=CF417740; organism=Citrus sinensis; type=EST; length=676bp
ATCTGAAGTGTACCTTGAGTAAACATAAAGGACCCATATTTTCCCTTAAG
TGGAACAAGAAGGGTGATTACCTTCTCACCGGAAGCTGTGATAAAACTGC
AATAGTATGGGATGTGAAGACAGAGGAATGGAAACAGCAATTTGAATTTC
ATTCAGGTCCAACGCTTGATGTTGACTGGCGCAATAATGTTTCATTTGCC
ACAAGCTCGACAGACAACATGATATATGTGTGTAAAATTGGGGAAAACCG
CCCTATTAAAACTTTTGCAGGGCATCAGGGTGAGGTTAACTGTGTTAAAT
GGGATCCAACAGGTTCGTTGTTGGCCTCTTGCTCAGATGACGTCACTGCC
AAGATATGGAACATGAAGCAGGACAAGTATGTTCATGATTTGAGAGAGCA
TTCCAAGGAGATATATACTATCAGATGGAGTCCTACAGGATCAGGGACGA
ATAATCCTAACCAGCAATTGATCCTAGCGAGTGCTTCTTTCGACTCTACA
GTAAAGCTTTGGGATGTAGAGCTAGGGAAACTCCTCTACAGTTTGAATGG
ACACAGGGAACCTGTGTACTCGCTCGCATTTAGCCCTAATGGGGAGTATT
TAGCAAGTGGATCTCTTGATAAATCCATGCACATCTGGTCACTGAAGGAA
GGAAAGATTGTGAAGACGTACACTGG
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