CF417740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.612e-24 Identity = 64/227 (28.19%), Postives = 119/227 (52.42%), Query Frame = 3 Query: 3 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-REPVYSLAFSPNGEYLASGSLDKSMHIWSLKEG-KIVKTYT 674 LK TL H I S+K++ G +L + S DKT +W ++++ E H D+ W +++ ++S D I + + + +KT GH+ V V ++P +L+ S S D +IW++ + + HS + + ++ G+ ++ S S+D TV++WD G+LL +++ + V + FSPNG+++ +G+LD ++ +WS K +KTYT Sbjct: 38 LKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGT---------LVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYT 255 HSP 2 Score: 80.8777 bits (198), Expect = 6.829e-15 Identity = 54/214 (25.23%), Postives = 104/214 (48.60%), Query Frame = 3 Query: 12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQG-EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY-VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSL--DKSMHIW 638 TL HK +F + +N + + +++GS D+ +WDV T E + HS P V + R+ + S D + + + + T + G EV+ VK+ P G + + + D T ++W+ +K + H E Y I T + + + S D+ + +++++ +++ +L GH + V ++A P +ASG+L D+S+ IW Sbjct: 125 TLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCI------FSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: LIS1_XENTR (Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 3.612e-24 Identity = 69/231 (29.87%), Postives = 111/231 (48.05%), Query Frame = 3 Query: 12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD-WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP----------TGSGTNNPNQQ-LILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668 TL H + + ++ G L + S D T +WD + E + H V N ++S D I + ++ +KTF GH+ V V+ + G+L+ASCS+D T ++W + + +LREH + I W+P TGS T + L S S D T+K+WD+ +G L +L GH V + F P G+++ S + DK++ IW K + +KT Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKT 375 HSP 2 Score: 89.3521 bits (220), Expect = 1.920e-17 Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 249 RPIKTFA--GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674 RP + +A GH+ V V + P S++ + S+D T K+W+ + + L+ H+ + I + +G +LAS S D T+KLWD + + + +++GH V S+A PNG+++ S S DK++ +W ++ G VKT+T Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK---------LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: LIS1A_XENLA (Lissencephaly-1 homolog A OS=Xenopus laevis GN=pafah1b1-A PE=2 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 3.612e-24 Identity = 69/231 (29.87%), Postives = 111/231 (48.05%), Query Frame = 3 Query: 12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD-WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP----------TGSGTNNPNQQ-LILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668 TL H + + ++ G L + S D T +WD + E + H V N ++S D I + ++ +KTF GH+ V V+ + G+L+ASCS+D T ++W + + +LREH + I W+P TGS T + L S S D T+K+WD+ +G L +L GH V + F P G+++ S + DK++ IW K + +KT Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKT 375 HSP 2 Score: 89.3521 bits (220), Expect = 1.920e-17 Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 249 RPIKTFA--GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674 RP + +A GH+ V V + P S++ + S+D T K+W+ + + L+ H+ + I + +G +LAS S D T+KLWD + + + +++GH V S+A PNG+++ S S DK++ +W ++ G VKT+T Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK---------LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.718e-24 Identity = 66/222 (29.73%), Postives = 107/222 (48.20%), Query Frame = 3 Query: 15 LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS--FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674 L H P+ ++ NK G +TGS D+T VWD + E E H + + N AT S D + + TF GH E+ C+ ++P +++A+ S D TAK+W+++ + V L H EI ++ + +G + + SFD TV +WD G+ +++L GH + S FS + + +GS+DK+ +W GK V T T Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDR---------IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLT 300 HSP 2 Score: 108.612 bits (270), Expect = 3.058e-23 Identity = 66/210 (31.43%), Postives = 99/210 (47.14%), Query Frame = 3 Query: 12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFA-TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIW 638 TL+ H I SL ++ GD ++TGS D T +VWD T H + + S T S D + + + T GH E+ +D TG L+A+ S D TA+++N K + L H EI I ++P G+ L + S D T ++WDV+ G+ L L GH + ++S AF+ G + +GS D S IW Sbjct: 214 TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNR---------LLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414 HSP 3 Score: 93.2041 bits (230), Expect = 1.330e-18 Identity = 60/223 (26.91%), Postives = 101/223 (45.29%), Query Frame = 3 Query: 6 KC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVK 665 KC T H I L +N + + TGS D TA +WD+++ E H + + + + T S D+ + V R + T GH E++ + SL+ + S D T +W+ K V L H EI + TG ++A+AS D T ++++ K + L GH + ++F+P G L +GS DK+ IW ++ G+ ++ Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK---------LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQ 381 HSP 4 Score: 78.9518 bits (193), Expect = 2.595e-14 Identity = 44/139 (31.65%), Postives = 67/139 (48.20%), Query Frame = 3 Query: 258 KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674 K H + V + GS + S D T K+W+ + +H L H +Y I + NNP I A+ SFD T KLW E GK ++ GH + L+F+P +A+GS+D + +W ++ G+ V T T Sbjct: 86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAF-------NNPYGDKI-ATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLT 216
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: TG125_CAEBR (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae GN=tag-125 PE=4 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.718e-24 Identity = 63/222 (28.38%), Postives = 112/222 (50.45%), Query Frame = 3 Query: 12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTY 671 T+ H I ++K++ G +L T S DKT +W++ ++ H D W ++ S T+S D + + ++ + KT GH V C ++P SL+ S S D + +IW+++ V L HS + + ++ GS ++ S S+D V++WD G+ + +L + PV + FSPNG+Y+ S +LD ++ +W +GK +K Y Sbjct: 74 TIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGS---------LITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQY 286 HSP 2 Score: 83.9593 bits (206), Expect = 8.066e-16 Identity = 45/138 (32.61%), Postives = 65/138 (47.10%), Query Frame = 3 Query: 255 IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668 I T GH ++ VK+ P G L + S D T KIWNM L H + WS + +AS D T+K+++V K+ +L GH V+ F+P + SGS D+S+ IW ++ G VKT Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKS---------IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKT 200 HSP 3 Score: 83.1889 bits (204), Expect = 1.376e-15 Identity = 57/215 (26.51%), Postives = 100/215 (46.51%), Query Frame = 3 Query: 12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATS-STDNMIYVCKIGENRPIKTFAGHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI--RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSL--DKSMHIW 638 TL H +F +N + +++GS D++ +WDV+T + HS P V + + S TS S D ++ + + +KT + V VK+ P G + S + D T K+W+ + K + + H Y I +S TG + S S D + +W+++ +++ SL GH + V + P +ASG+L D ++ IW Sbjct: 158 TLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKW--------IISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: TAF5_SCHPO (Transcription initiation factor TFIID subunit 5 OS=Schizosaccharomyces pombe GN=taf5 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.048e-24 Identity = 60/211 (28.44%), Postives = 105/211 (49.76%), Query Frame = 3 Query: 15 LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSL 644 L H GP++ ++ YLL+ S D +A +W V T+ ++ H+GP DV + FAT+S D + P++ FAGH +V+CV + P + + + S D T ++W++ + V H++ + + +P G +ASA + + LWD+ G+ + ++ GHR +YSL+FS L SG D ++ W + Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGH---------TMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576 HSP 2 Score: 82.4185 bits (202), Expect = 2.347e-15 Identity = 50/174 (28.74%), Postives = 84/174 (48.28%), Query Frame = 3 Query: 150 HSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668 HSGP + +N + S D + + + + GH G V V + P G A+ S D TA++W+ +++ LR ++ S T +PN +L +S D T +LWDV G + NGH +PV ++A +P+G +AS + +H+W + G+ +KT Sbjct: 378 HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCD---HIYPLR-----VFAGHLSDVDCVTFHPNSAYVLTGSS-DKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKT 542 HSP 3 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 36/133 (27.07%), Postives = 61/133 (45.86%), Query Frame = 3 Query: 273 HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTY 671 H G V + P L SCS+D +A++W++ + + H+ ++ + + P G A+AS D T +LW + L GH V + F PN Y+ +GS DK+ +W + G V+ + Sbjct: 378 HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGH---------YFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVF 501
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: LIS1B_DANRE (Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 1.051e-23 Identity = 67/231 (29.00%), Postives = 111/231 (48.05%), Query Frame = 3 Query: 12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD-WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS------GTNNPNQQL-----ILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668 TL H + + +++ G L + S D T +WD + E + H V N ++S D + + ++ +KTF GH+ V V+ + G+LLASCS+D T ++W + + +LREH + I W+P + T + N++ L S S D T+K+WD+ G L +L GH V + F P G ++ S + DK++ IW K + +KT Sbjct: 145 TLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKT 375 HSP 2 Score: 94.3597 bits (233), Expect = 5.968e-19 Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 249 RPIKTFA--GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674 RP + +A GH+ V V + P SL+ S S+D T K+W+ + + L+ H+ + I + TG +LAS S D T+KLWD + + + +++GH V S+A PNG+++ S S DK+M +W + G VKT+T Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK---------LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFT 231
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.373e-23 Identity = 66/216 (30.56%), Postives = 109/216 (50.46%), Query Frame = 3 Query: 24 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF-ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668 HK + S++++ G+ L + S D+T +W +F+ H+ P VD+ + F AT+S D I V + R + + H V C K+ P G L+ SCS+D T KIW+ + V++ + + ++P+G+ +ASA D TVK+WDV + KLL H V ++F P+ YL + S D ++ I L EG+++ T Sbjct: 59 HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGT---------CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYT 265 HSP 2 Score: 84.7297 bits (208), Expect = 4.729e-16 Identity = 50/217 (23.04%), Postives = 100/217 (46.08%), Query Frame = 3 Query: 24 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF-ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTY 671 HK I SL + G L T S D ++W+ K ++ H V + + + A++S D + + + F H V V + G LA+ S+D + K+W+M + ++++ L H+ + ++SP G ++ S S D T+K+WD + + + + + F+P+G +AS D+++ +W ++ K+++ Y Sbjct: 17 HKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGR---------LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 224 HSP 3 Score: 79.337 bits (194), Expect = 1.987e-14 Identity = 49/182 (26.92%), Postives = 85/182 (46.70%), Query Frame = 3 Query: 132 KQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674 ++ F+ H +D N AT+S D + + + + GH+ V V++ P G+LLAS S D T ++W + + + H+ + ++ +S G LA+AS D ++K+W + + LYSL H V FSP+G + S S DK++ IW + V ++ Sbjct: 11 ERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ---------FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183 HSP 4 Score: 70.0922 bits (170), Expect = 1.205e-11 Identity = 42/175 (24.00%), Postives = 84/175 (48.00%), Query Frame = 3 Query: 12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL 533 +L +H + K++ G +++ S DKT +WD ++ F G VD+ + A++ +D + V + N+ ++ + H G VNC+ + P+ + L + S D T KI ++ + + ++ L+ H+ ++T+ +S G + AS D+ V LW +L Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGE---------LFASGGADTQVLLWRTNFDEL 304
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WD51A_MOUSE (WD repeat-containing protein 51A OS=Mus musculus GN=Wdr51a PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.342e-23 Identity = 63/216 (29.17%), Postives = 102/216 (47.22%), Query Frame = 3 Query: 24 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668 HK + + ++ G L +GS DKT +W + F H+ V + + S T+S D + V R + + H V C K+ P G L+ S SDD T K+W+ + +H EH + + + P+G+ +A+A D+TVK+WD +LL H V +L+F P+G YL + S D ++ I L EG+++ T Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGT---------CIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYT 266 HSP 2 Score: 87.4261 bits (215), Expect = 7.296e-17 Identity = 51/217 (23.50%), Postives = 99/217 (45.62%), Query Frame = 3 Query: 24 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTY 671 H+ + + ++ +L +GS D T ++W +K + +F H V++ + A+ S D + + F H V V + G L + SDD T K+W+ + +++ L +H + ++SP G ++ SAS D TVKLWD + ++S H V + F P+G +A+ +D ++ +W + ++++ Y Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGR---------LIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHY 225 HSP 3 Score: 83.5741 bits (205), Expect = 1.054e-15 Identity = 54/183 (29.51%), Postives = 86/183 (46.99%), Query Frame = 3 Query: 132 KQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIW--NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTY 671 ++ F+ H VD+ N A+ S D+ + + + F GH+ V CV + P+G LLAS S D T +IW N+K + V R H+ + ++ + G L +AS D TVK+W + L+SL H V FSP+G + S S DK++ +W + + +Y Sbjct: 12 ERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQS---------LVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSY 183
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: LIS1_RAT (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.216e-23 Identity = 68/231 (29.44%), Postives = 109/231 (47.19%), Query Frame = 3 Query: 12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD-WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP----------TGSGTNNPNQQ-LILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKT 668 TL H + + ++ G L + S D T +WD + E + H V N ++S D I + ++ +KTF GH+ V V+ + G+L+ASCS+D T ++W + + +LREH + I W+P TGS T + L S S D T+K+WDV G L +L GH V + F G+++ S + DK++ +W K + +KT Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT 375 HSP 2 Score: 90.5077 bits (223), Expect = 8.618e-18 Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 249 RPIKTFA--GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYT 674 RP + +A GH+ V V + P S++ S S+D T K+W+ + + L+ H+ + I + +G +LAS S D T+KLWD + + + +++GH V S+A PNG+++ S S DK++ +W ++ G VKT+T Sbjct: 97 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK---------LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231 The following BLAST results are available for this feature:
BLAST of CF417740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 466
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417740 ID=CF417740; Name=CF417740; organism=Citrus sinensis; type=EST; length=676bpback to top |