CF417740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: NUDF_EMENI (Nuclear distribution protein nudF OS=Emericella nidulans GN=nudF PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 3 Query: 261 TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL-LYSLNGHREPVYSLAF-SPNGEYLASGSLDKSMHIWSLKEG---KIVKTYT 674 T H+ V CV + P + LAS S+D T KIW+ + + L+ H + + +G +LAS S D T+KLWD + +L+GH V S+ F + N +L S S D ++ IW + G K++K+ T Sbjct: 109 TLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGV-------SGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSAT 244
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: CIAO1_PICST (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Pichia stipitis GN=CIA1 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11 Identity = 64/259 (24.71%), Postives = 108/259 (41.70%), Query Frame = 3 Query: 12 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF----EFHSG-----------PTLDVDWRNNVSFATSSTDNMIYVCKIGENRP------------IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIW-----NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYS----LNGHREPVYSLAFSPNGEY-------------LASGSLDKSMHIWS 641 ++ H +S+ +K L T S DKT+ ++ + ++ Q + H P ++ ++ + + A+ S D+ I + I E + GH+ E+ V W+ GSLLASCS D T IW +++ + + L +H +I + W P Q +LAS+S+D T++L+ +L +S LNGH V+ F N + L S S D + IWS Sbjct: 7 SIKAHSDKAWSVSAHKTVPLLATASTDKTSKIYKLSVKQNFPQVAQLEDTHKRSVRAVSFKPPLPGVESNFLDLPALASGSFDSTISIWGIDEPETEILSSPRNEWNLMAIIEGHENEIKAVGWNHNGSLLASCSRDKTVWIWETDPETLEEFECISVLNDHQHDIKHVVWHP---------HQNLLASSSYDDTIRLYKQDLDDDDWSCVGVLNGHEGTVWCSQFEDNHRHQESNESSNRSKIRLVSVSDDMTARIWS 256
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: WDR3_DICDI (WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum GN=wdr3 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11 Identity = 42/197 (21.32%), Postives = 89/197 (45.18%), Query Frame = 3 Query: 63 GDYLLTGSCDKTAIVWDVKTEEWKQQF---EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPNGEYLASGSLDKSMHIWSL 644 G +TG C + +WD++ + Q + + T ++ A+ +D I + + + + F GH+G V + ++ G++L S S D +W++ + + LR H +I +++ + L ++S D +K+WD E + ++ GHR P++ + +P+ L S + D + W + Sbjct: 28 GKLAITG-CGERISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNH---------LITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWRI 214
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11 Identity = 60/237 (25.32%), Postives = 106/237 (44.73%), Query Frame = 3 Query: 18 SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK--QQFEFHSGPTLDVDWRN----NVSFATSSTDNMIYVCK--IGENRPIKTFAGHQGEVNCVKWDP--TGSLLASCSDDVTAKIWNMKQDKYVHDL-REHSKEIYTIRWSPTGSG----TNNP------NQQLILASASFDSTVKLWDVELGKLLYSLN-----GHREPVYSLAFSPN---GEYLASGSLDKSMHIWS 641 S H I + G L T S D+T +++++ E + + + H G V W + N+ A++ D + + + G + I FA H+ VN V W P G LLA S D + K + + H++ H + ++ W+P + ++NP N++ + + D+ +K+W + Y L GH + V +A+SP Y+AS S DK++ IW+ Sbjct: 11 SGHDDMIHDAVLDYYGRRLATCSSDRTIKIFEIEGESQRLVETLKGHDGAVWSVAWAHPKYGNI-LASAGYDGKVLIWREQAGSWQRIFDFALHKASVNIVSWSPHEAGCLLACASSDGNVSVLEFKDNSWEHNIFHAHGLGVNSVSWAPATTPGSIVSSNPGPGSTGNRRFVTGGS--DNLLKIWTFDPATNGYKLEREPLAGHTDWVRDVAWSPTVLQKSYIASASQDKTVRIWT 244
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: GRWD1_HUMAN (Glutamate-rich WD repeat-containing protein 1 OS=Homo sapiens GN=GRWD1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11 Identity = 49/179 (27.37%), Postives = 76/179 (42.46%), Query Frame = 3 Query: 24 HKGPIFSLKWNKK-GDYLLTGSCDKTAIVWD-VKTEEW---KQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKI----GENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY---VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV 518 H G F+L W+ + LLTG C K +W W ++ F H+ D+ W N FA+ S D I + I + + T H G+VN + W L S DD KIW+++Q K V ++H + ++ W P SG + A++ D + WD+ Sbjct: 213 HMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSG--------VFAASGADHQITQWDL 383
BLAST of CF417740 vs. ExPASy Swiss-Prot
Match: COR1B_PONAB (Coronin-1B OS=Pongo abelii GN=CORO1B PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11 Identity = 42/143 (29.37%), Postives = 69/143 (48.25%), Query Frame = 3 Query: 261 TFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLRE-------HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG-HREPVYSLAFSPNGEYLASGSLDKSMHIWSLKEGKIV 662 T GH G V + W P ++AS S+D T +W + ++ L E H+K + I W PT +L SA D+ V +W+V + LY L+ H + +Y+++++ NG S DKS+ I ++G +V Sbjct: 77 TVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIIAWHPTARN--------VLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNVSWNRNGSLFCSACKDKSVRIIDPRQGTLV 211 The following BLAST results are available for this feature:
BLAST of CF417740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 466
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417740 ID=CF417740; Name=CF417740; organism=Citrus sinensis; type=EST; length=676bpback to top |