CF417744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPC_MYCLE (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium leprae GN=clpC PE=3 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.745e-40 Identity = 95/211 (45.02%), Postives = 126/211 (59.72%), Query Frame = 1 Query: 85 MFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPT------LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 MFERFT++A +V++LAQEEAR L HN++ AAK L S+GI+L+ R +VE IIG+G + IPFTPRAK+VLELSL EA QLGHNYIG+ VAA+VL LGA+ + +R QVI++ + + L+++G NLT A E KLDPV+GR+ +IERV+Q+L RRTKNN Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLDSLGISLEAVRSQVEDIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMESKLDPVIGREKEIERVMQVLSRRTKNN 211
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPC_ODOSI (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Odontella sinensis GN=clpC PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.887e-40 Identity = 90/213 (42.25%), Postives = 120/213 (56.34%), Query Frame = 1 Query: 85 MFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVI--------RMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 MFE+FTE AIKVIML+QEEARR+GHNFV A+ LK + LK AR E+E IGRG+GFVA EIPFTPRAKRVLE+++ E + LG N++G+ VA R L+ LG + +R ++ + + PTL+EY N++K A +GKLDPV+GR +I V+++L RR KNN Sbjct: 1 MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLLGIIGQRHGIGARALKKQKVTLKKARREIELYIGRGTGFVASEIPFTPRAKRVLEMAVHEGKDLGQNFVGTEHILLALISESDGVAMRTLDKLGVNIPKLRNLILMYIEENQEEILRPLTQAEKFLLEREKKGSSTPTLDEYSENISKEAVDGKLDPVIGRDKEIHEVIKVLARRRKNN 213
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.529e-36 Identity = 89/206 (43.20%), Postives = 119/206 (57.77%), Query Frame = 1 Query: 85 MFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 MF RFTE+A KV+ L+QEEA RLGHN + AAK L+S+G+ + + EVEK+IG G I +TPRAK+V+ELS +EAR+LGH+Y+G+ VAARVL NLG + R QV+++ N PTL+ +LT A+EGK+DPV+GR +IERV+Q+L RRTKNN Sbjct: 2 MFGRFTERAQKVLALSQEEAVRLGHNNIGTEHILLGLVREGEGIAAKALQSLGLEVSKIQEEVEKLIGVGKQ-PTQSIHYTPRAKKVVELSQDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESQAGRQGRSGQQSNASTPTLDSLARDLTVSAKEGKIDPVIGRSKEIERVIQVLSRRTKNN 206
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPC_BACSU (Negative regulator of genetic competence clpC/mecB OS=Bacillus subtilis GN=clpC PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.908e-36 Identity = 85/205 (41.46%), Postives = 120/205 (58.54%), Query Frame = 1 Query: 85 MFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 MF RFTE+A KV+ LAQEEA RLGHN + AAK L+++G+ + + EVE +IGRG ++ I +TPRAK+V+ELS++EAR+LGH+Y+G+ VAARVL NLG + R QV+++ PTL+ +LT +A+E LDPV+GR +I+RV+++L RRTKNN Sbjct: 2 MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQE-MSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNA--NTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNN 203
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPC_STAAW (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MW2) GN=clpC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.138e-30 Identity = 79/205 (38.54%), Postives = 111/205 (54.15%), Query Frame = 1 Query: 85 MFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 +F R TE+A +V+ AQEEA RL H+ + AAKVL+S I EVEK+IG G V + +TPRAK+V+ELS++EAR+L HN++G+ VAARV NL + + R QV++ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNN Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGT-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKS--NNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNN 203
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPC_STAAS (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MSSA476) GN=clpC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.138e-30 Identity = 79/205 (38.54%), Postives = 111/205 (54.15%), Query Frame = 1 Query: 85 MFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 +F R TE+A +V+ AQEEA RL H+ + AAKVL+S I EVEK+IG G V + +TPRAK+V+ELS++EAR+L HN++G+ VAARV NL + + R QV++ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNN Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGT-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKS--NNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNN 203
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPC_STAAR (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MRSA252) GN=clpC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.138e-30 Identity = 79/205 (38.54%), Postives = 111/205 (54.15%), Query Frame = 1 Query: 85 MFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 +F R TE+A +V+ AQEEA RL H+ + AAKVL+S I EVEK+IG G V + +TPRAK+V+ELS++EAR+L HN++G+ VAARV NL + + R QV++ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNN Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGT-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKS--NNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNN 203
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPC_STAAN (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain N315) GN=clpC PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.138e-30 Identity = 79/205 (38.54%), Postives = 111/205 (54.15%), Query Frame = 1 Query: 85 MFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 +F R TE+A +V+ AQEEA RL H+ + AAKVL+S I EVEK+IG G V + +TPRAK+V+ELS++EAR+L HN++G+ VAARV NL + + R QV++ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNN Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGT-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKS--NNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNN 203
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPC_STAAM (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpC PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.138e-30 Identity = 79/205 (38.54%), Postives = 111/205 (54.15%), Query Frame = 1 Query: 85 MFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 +F R TE+A +V+ AQEEA RL H+ + AAKVL+S I EVEK+IG G V + +TPRAK+V+ELS++EAR+L HN++G+ VAARV NL + + R QV++ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNN Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGT-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKS--NNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNN 203
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPC_STAAC (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain COL) GN=clpC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.138e-30 Identity = 79/205 (38.54%), Postives = 111/205 (54.15%), Query Frame = 1 Query: 85 MFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 +F R TE+A +V+ AQEEA RL H+ + AAKVL+S I EVEK+IG G V + +TPRAK+V+ELS++EAR+L HN++G+ VAARV NL + + R QV++ N PTL+ +LT +A++G LDPV+GR +I RV+++L RRTKNN Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGT-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKS--NNTPTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNN 203 The following BLAST results are available for this feature:
BLAST of CF417744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417744 ID=CF417744; Name=CF417744; organism=Citrus sinensis; type=EST; length=699bpback to top |