CF417744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: HLYB_TREHY (Hemolysin B OS=Treponema hyodysenteriae GN=tlyB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22 Identity = 72/212 (33.96%), Postives = 108/212 (50.94%), Query Frame = 1 Query: 85 MFE-RFTEKAIKVIML-AQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGF-VAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXN----KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 MF+ T KA KVI L AQEEA+RL H+ V A +VL + I+L ++E+E + + S V +P PR ++++ S EEAR L HNYIG+ A VL ++G + + +R ++++M N K PTL+++ +LTK+A + LD V+GR+ ++ RVVQIL RR KNN Sbjct: 1 MFQFHLTSKAKKVIELYAQEEAKRLNHDMVTPEHILLGLLYESEALATRVLMRLKIDLDRLKLELESAMVKSSTTKVFGTLPTAPRVQKLISRSAEEARALSHNYIGTEHLLLGLLREESGTAYNVLTSMGLELTILRQEILKMLGVAGSNISSMEQTSQEDNVKKVKTPTLDQFARDLTKMARDKALDRVIGRENEVMRVVQILSRRKKNN 212
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPB_COREF (Chaperone protein clpB OS=Corynebacterium efficiens GN=clpB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.024e-13 Identity = 61/205 (29.76%), Postives = 88/205 (42.93%), Query Frame = 1 Query: 100 TEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIG---RGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRT--QVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 T K + + A ++A G+ + AA VL + G++ K E +K++ + SG F A L S E A +LG Y+ + AA +L+ GA I+ Q +R + LE+Y T+LTKLA EGK+DPV+GR +I RVVQ+L RRTKNN Sbjct: 7 TTKTSEAMQAALQQASANGNPDIRPAHLLVAILDQADGVAAPVLTAAGVDPKTILAEAQKLVDGYPKASGSNLANPNFNRDALNALTASQELAGELGDEYVSTEVLLAGIARGKSD-AADLLKGKGATYDAIKAAFQSVR--------GSQKVTSQDPEGQFQALEKYSTDLTKLAREGKIDPVIGRDQEIRRVVQVLSRRTKNN 202
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPB_CORGL (Chaperone protein clpB OS=Corynebacterium glutamicum GN=clpB PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12 Identity = 58/203 (28.57%), Postives = 86/203 (42.36%), Query Frame = 1 Query: 100 TEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIG---RGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 T K + + A ++A G+ + AA VL + G++ K+ E +K++ + SG F A + E A +LG Y+ + AA +L N GA I+ + + LE+Y T+LTKLA EGK+DPV+GR +I RVVQ+L RRTKNN Sbjct: 7 TTKTNEAMQAALQQASSAGNPDIRPAHLLAAILEQTDGVAAPVLMATGVDPKEILAEAKKLVASYPKASGANMANPNFNRDALNAFTAAQELAGELGDEYVSTEVLLAGIARGKSD-AADLLTNKGATYDAIKEAFPSVRGSQRVTTQDPE------GQFQALEKYSTDLTKLAREGKIDPVIGRDQEIRRVVQVLSRRTKNN 202
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPB_BRAJA (Chaperone protein clpB OS=Bradyrhizobium japonicum GN=clpB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 54/210 (25.71%), Postives = 85/210 (40.48%), Query Frame = 1 Query: 91 ERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLK-------DARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 E++TE++ I AQ A R GH AA ++ G N + DA +V K+ G G+G +I P R + + + + G +++ A +L G P N+ + + N L++Y +LT+ A +GKLDPV+GR +I R +Q+L RRTKNN Sbjct: 4 EKYTERSRGFIQSAQSLAVREGHQQFSTLHVLKVLLDDNEGLAAGLIDRAGGNSRAILKATEDALNKVPKVSGGGAG----QIYLAPELARTFDAAEKAGEKAGDSFVTVERLLLGLTLEKTSEAGTILSKGGVTPQNLNAAIEALRKGRTADSATAE------NAYDALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNN 203
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPB_RHOPA (Chaperone protein clpB OS=Rhodopseudomonas palustris GN=clpB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11 Identity = 51/206 (24.76%), Postives = 83/206 (40.29%), Query Frame = 1 Query: 91 ERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRG---SGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 E++TE+ I AQ A R GH A ++ G N + E+ +G+ SG A ++ P R + + + A + G +++ A ++L G P N+ + + N L++Y +LT+ A +GKLDPV+GR +I R +Q+L RRTKNN Sbjct: 4 EKYTERVRGFIQSAQSLAMREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGNSRAILKATEEALGKMPKVSGSGAGQVYLAPATARAFDAAEKAAEKAGDSFVTVERLLLALSLDKDSEAGQLLTKGGVTPQNLNAAINALRKGRTADSATAE------NAYDALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNN 203
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: HSP78_YEAST (Heat shock protein 78, mitochondrial OS=Saccharomyces cerevisiae GN=HSP78 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 1 Query: 571 PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 P LE++GTNLTKLA +GKLDPV+GR +I R +QIL RRTKNN Sbjct: 96 PALEQFGTNLTKLARDGKLDPVIGRDEEIARAIQILSRRTKNN 138
BLAST of CF417744 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNY3 (Chaperone protein clpB 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpB1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 51/202 (25.25%), Postives = 85/202 (42.08%), Query Frame = 1 Query: 94 RFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXXXXXXXVAARVLENLGADPSNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNN 699 +FTE+A I+ +QE ARR + + AA++ + ++ + R ++E R VE + R+ V+ + AR + S V + L DP ++ + + K L++YG +LT+ A +GKLDPV+GR +I RV+Q+L RR+KNN Sbjct: 8 KFTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDGEGLRQQLEIFTNRQPKQAYVEQLYLGRSLDVMLDRADAARSSWEDKFISVEHLLVGFAEDDRVGRKTLRAFNLDPQDLELAIKAIRGSQKVTEPNQE------EKYEALDKYGRDLTEQARQGKLDPVIGRDEEIRRVIQVLSRRSKNN 203 The following BLAST results are available for this feature:
BLAST of CF417744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417744 ID=CF417744; Name=CF417744; organism=Citrus sinensis; type=EST; length=699bpback to top |