CF417745

Overview
NameCF417745
Unique NameCF417745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:183..899. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.586e-36
Identity = 90/224 (40.18%), Postives = 122/224 (54.46%), Query Frame = 1
Query:   79 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDG--GSCKFDKSKIAAAVSNFSVISSD 717
            E  F+ FK K+ K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F    +RLR      K   + T   P   DWR+ GAVT VK QG CGSCW+FS  G +EG   ++   LVSLSEQ LV CD         + DSGCNGGLM++AF +I+ +  G V  E  YPY   +G    C+ +  +I AA+++   +  D
Sbjct:   38 EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQD 246          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.586e-36
Identity = 80/209 (38.28%), Postives = 123/209 (58.85%), Query Frame = 1
Query:   67 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV 690
            LL A  +F  F  KF+K Y+++ E   RF++F+ NL     +   D TA + + KFSDL+  E   ++ GL   L+     +   +  P +  P +FDWR    VT VK+QG CG+CW+F+   +LE    +   +L++LSEQQL+DCD+          D+GCNGGL+++A+E +++ GGV+ E DYPY G+D G+C+ D +K    V
Sbjct:   21 LLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY---------VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSD-GNCRVDVAKFVVKV 219          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.586e-36
Identity = 85/186 (45.70%), Postives = 115/186 (61.83%), Query Frame = 1
Query:   88 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG 639
            F  F + +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +G+TKFSDLT  EF   +L  N  L+  +  + +P    NDL P ++DWR  GAVT VK+QG CGSCW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E DY Y G
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYL--NPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQG 339          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.071e-36
Identity = 81/210 (38.57%), Postives = 124/210 (59.05%), Query Frame = 1
Query:   79 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF 699
            +H F  F+ +F + Y +  E   R R+F+ NL+  +     +  +A +G+T+F+D+T SE++ +  GL +R    A    A ++P    +LP +FDWR   AVT VK+QG+CGSCW+FS TG +EG + + TGEL   SEQ+L+DCD         + DS CNGGLM++A++ I   GG+E E +YPY       C F+++     V+ F
Sbjct:  305 DHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKK-NQCHFNRTLSHVQVAGF 503          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.614e-36
Identity = 84/218 (38.53%), Postives = 122/218 (55.96%), Query Frame = 1
Query:   52 QSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL---PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN 696
            +S D L+     F  + S F K Y T EE   RF VFK NL+          +   G+ +F+DL+  EF++ +LGL   +    + +        D+   P   DWR  GAV  VK+QG+CGSCW+FS   A+EG + + TG L +LSEQ+L+DCD         + ++GCNGGLM+ AFEYI+K GG+ +E+DYPY+  + G+C+  K +      N
Sbjct:   42 ESHDKLIEL---FENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCD--------TTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYS-MEEGTCEMQKDESETVTIN 247          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.025e-36
Identity = 83/202 (41.09%), Postives = 115/202 (56.93%), Query Frame = 1
Query:  127 TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN---DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE--LVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 714
            + EE + R+ +FKAN+             V G+  F+D++  E+R  +LG       P DA    +  ++   D     DWR  GAVT +K+QG CG CWSFS TGA EGA +L+ G+  LVSLSEQ L+DC        SGS  ++GC GGLM  AFEYI+   G++ E  YPYT  DG  CKF+   +AA +S++  ++S
Sbjct:   42 SSEEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGT------PFDASSLEMTESDKIFDASAQVDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDC--------SGSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKKCKFNPKNVAAQLSSYVNVTS 229          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 84/218 (38.53%), Postives = 122/218 (55.96%), Query Frame = 1
Query:   70 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG---ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 714
            L   + F+ +     +TY++ EE + R+++FK+N+    +        V G+  F+D+T  E+R  +LG           ++  I  T   PT  DWR  GAVT +K+QG CG CWSFS TG+ EGAHF+++G   +LVSLSEQ L+DC            ++GC GGLM  AFEYI+   G++ E  YPYT  DG  CKF  S I A + ++  ++S
Sbjct:   24 LQYRNAFTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDGSALIGTEEEKIFST-PAPT-VDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYG-------NNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKECKFKTSNIGAQIVSYQNVTS 231          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35
Identity = 80/213 (37.56%), Postives = 122/213 (57.28%), Query Frame = 1
Query:   67 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV 690
            LL A ++F  F  KF+K Y+++ E  +RF++F+ NL     +   D TA + + KFSDL+  E   ++ GL+    LP   Q   +  IL  P +  P +FDWR    VT VK+QG CG+CW+F+  G+LE    +    L++LSEQQ +DCD           ++GC+GGL+++AFE  ++ GGV+ E DYPY  T  G C+ + ++    V
Sbjct:   21 LLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLS----LPHQTQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFESAMEMGGVQMESDYPYE-TANGQCRINPNRFVVGV 219          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 85/205 (41.46%), Postives = 116/205 (56.59%), Query Frame = 1
Query:   61 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF 663
            D   NA+ H   +KS   + Y T EE ++R  V++ N+R  +          HG T     F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CGSCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H+         + GCNGGLM+ AF+YI + GG++ E+ YPY   D GSCK+
Sbjct:   22 DQTFNAQWH--QWKSTHRRLYGTNEE-EWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLML--QIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHD-------QGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKD-GSCKY 213          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.662e-35
Identity = 81/201 (40.30%), Postives = 114/201 (56.72%), Query Frame = 1
Query:  136 EHDYRFRVFKANLRRAKRRQLLDPTAVH--GVTKFSDLTPSEFRRQFLGLN----RRLRLPADAQK--APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 714
            + D RF +FK NLR        +  A +  G+T F++LT  E+R  +LG      RR+    +     +  +  +++P   DWR  GAV  +KDQG CGSCW+FS   A+EG + + TGELVSLSEQ+LVDCD         S + GCNGGLM+ AF++I+K GG+  EKDYPY GT+G      K+     +  +  + S
Sbjct:   24 QQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPS 216          
The following BLAST results are available for this feature:
BLAST of CF417745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CYSP_TRYBB1.586e-3640.18Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATV_NPVHC1.586e-3638.28Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATF_MOUSE1.586e-3645.70Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CPR1_DROME2.071e-3638.57Putative cysteine proteinase CG12163 OS=Drosophila... [more]
XCP2_ARATH4.614e-3638.53Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CYSP7_DICDI6.025e-3641.09Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CYSP4_DICDI1.342e-3538.53Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CATV_NPVOP2.990e-3537.56Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATL1_RAT5.101e-3541.46Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CYSP4_BRANA6.662e-3540.30Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-675 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417745 ID=CF417745; Name=CF417745; organism=Citrus sinensis; type=EST; length=717bp
GTCAACGACGACGATGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGA
ACAATCCGAAGATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCA
AGTCCAAATTCTCCAAGACTTACGCCACCCAGGAGGAGCACGATTACCGA
TTCCGCGTGTTCAAGGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCT
GGACCCCACTGCTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGT
CTGAATTCCGCCGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCA
GCTGACGCTCAAAAGGCTCCTATTCTCCCCACCAACGATCTTCCTACTGA
CTTTGACTGGCGTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCG
CATGTGGATCGTGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCG
CACTTCTTATCGACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGT
GGACTGTGATCACGAGTGTGATCCAGAGGAATCTGGTTCATGTGACTCTG
GGTGCAATGGTGGGCTAATGAACTCTGCCTTTGAGTACATACTCAAGGCT
GGTGGGGTTGAGCGAGAGAAGGACTACCCTTACACTGGGACCGACGGTGG
TTCCTGCAAATTTGACAAAAGCAAAATTGCTGCAGCTGTATCTAATTTCA
GTGTTATTTCCTCTGAT
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