CF417745

Overview
NameCF417745
Unique NameCF417745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30
Identity = 64/194 (32.99%), Postives = 109/194 (56.19%), Query Frame = 1
Query:   67 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 645
            LL A  +F  F + ++K Y    E + RF +F+  L     +  L+ +AV+ + KF+DL+ +E   ++ GLN  ++     +   I  P    P +FDWR    VT +K+Q ACG+CW+F+   ++E  + +     + LSEQQ++DCD+          D GC+GGL+++AFE +++ G + +E +YPY G +
Sbjct:   24 LLKAGDYFETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGLNMPVQTTNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY---------VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVN 208          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30
Identity = 78/211 (36.97%), Postives = 109/211 (51.66%), Query Frame = 1
Query:   79 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF 699
            ++H+ L+K    K Y  + E + R  +++ NL+      L     +H    G+    D+T  E   + +G  R  R               LP   DWR+ G VT VK QG+CG+CW+FSA GALEG   L TG+L+SLS Q LVDC +E   E+ G  + GC GG M  AF+YI+  GG+E +  YPY  TD   C ++    AA  S +
Sbjct:   33 DYHWDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISCR-MGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNE---EKYG--NKGCGGGYMTEAFQYIIDNGGIEADASYPYKATD-EKCHYNSKNRAATCSRY 236          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30
Identity = 77/201 (38.31%), Postives = 107/201 (53.23%), Query Frame = 1
Query:   88 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV 690
            F+ F  ++ K+Y +  E   RFR+F  +L   +           G+ +FSD++  EF+   LG  +       A    +     LP   DWR+ G V+ VK+Q  CGSCW+FS TGALE A+  +TG+ +SLSEQQLVDC         G  + GCNGGL + AFEYI   GG++ E+ YPY G + G C +     A  V
Sbjct:   61 FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATL-AGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDC-------AGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN-GVCHYKAENAAVQV 252          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30
Identity = 81/198 (40.91%), Postives = 108/198 (54.55%), Query Frame = 1
Query:  136 EHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAP-----ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 708
            E   RF  FK+N     +  ++   P  +H + +F D+  +EFR  F+G  RR   P+     P      L  +DLP   DWR  GAVTGVKDQG CGSCW+FS   ++EG + + TG LVSLSEQ+L+DCD         + + GC GGLM++AFEYI   GG+  E  YPY     G+C      +A A  N  V+
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLH-LNRFGDMDQAEFRATFVGDLRR-DTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD--------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAA-RGTC-----NVARAAQNSPVV 242          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.427e-30
Identity = 79/191 (41.36%), Postives = 102/191 (53.40%), Query Frame = 1
Query:  136 EHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN-RRLRL----PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS 693
            E   RF VFK N         +D      + KF+D+T  EFR  + G   +  R+    P           + +P   DWR  GAVT VKDQG CGSCW+FS   A+EG + + T +LVSLSEQ+LVDCD +         + GCNGGLM+ AFE+I + GG+  E +YPY   D G+C   K   A AVS
Sbjct:   53 EKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD--------QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYD-GTCDVSKEN-APAVS 233          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.101e-29
Identity = 88/237 (37.13%), Postives = 120/237 (50.63%), Query Frame = 1
Query:    7 DDDAMIRQVVPSDGEQSEDHLLNA------EHHFSLFKSKFSKTYATQEEHDYRFRVFKANL---RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV 690
            DD   IR V        E  ++ A         F+ F  +  K Y    E   RFR+F  +L   R   RR L  P  + G+ +F+D++  EF+   LG  +       A    +     LP   DWR+ G V+ VKDQG CGSCW+FS TG+LE A+  +TG+ VSLSEQQLVDC        +   + GC+GGL + AFEYI   GG++ E+ YPYTG + G C +    +   V
Sbjct:   29 DDSNPIRSVTDHAASALESTVIAALGRTRDALRFARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGL--PYRL-GINRFADMSWEEFQASRLGAAQNCSATL-AGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDC-------ATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVN-GICHYKPENVGVKV 253          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.877e-29
Identity = 82/218 (37.61%), Postives = 113/218 (51.83%), Query Frame = 1
Query:   73 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRL-PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS 711
            N +  +  +K+   + Y   EE  +R  V++ N++  +          HG T     F D+T  EFR Q +G  R  +       + P+    DLP   DWR  G VT VK+Q  CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGG M  AF+Y+ + GG++ E+ YPY   D   CK+      A  + F+V++
Sbjct:   24 NLDTKWYQWKATHRRLYGANEE-GWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFR-QMMGCFRNQKFRKGKVFREPLFL--DLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVD-EICKYRPENSVANDTGFTVVA 229          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.877e-29
Identity = 63/119 (52.94%), Postives = 77/119 (64.71%), Query Frame = 1
Query:  343 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF 699
            P   DWR+ G VT VKDQG CGSCW+FS TGALEG HF + G+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y+   GG++ E+ YPYT  D   C++     AA  + F
Sbjct:    2 PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSR---PEG----NQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGF 113          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.452e-29
Identity = 69/188 (36.70%), Postives = 99/188 (52.66%), Query Frame = 1
Query:  106 KFSKTYATQEEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 666
            K+ K+Y +  E + RF +FK  LR         + +   G+ +F+DLT  EFR  +LG          + +        LP+  DWR  GAV  +K QG CG CW+FSA   +EG + + TG L+SLSEQ+L+DC    +         GCNGG +   F++I+  GG+  E++YPYT  D G C  D
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQD-GECNLD 227          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.202e-29
Identity = 78/179 (43.58%), Postives = 99/179 (55.31%), Query Frame = 1
Query:  133 EEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFRRQFLGL---NRRLRLPADAQKAPILPTN--DLPT-DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 648
            +E + RF VFK N++      Q  D      + KF D+T  EFR ++ G    + R +          +  N   LP    DWR  GAVTGVKDQG CGSCW+FS   ++EG + + TGELVSLSEQ+LVDCD         S + GCNGGLM+ AFE+I K  G+  E  YPY   DG
Sbjct:   54 DEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIQK-NGITTEDSYPYAEQDG 223          
The following BLAST results are available for this feature:
BLAST of CF417745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CATV_NPVBS3.783e-3032.99Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CATS_MOUSE3.783e-3036.97Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
ALEU_HORVU3.783e-3038.31Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP2_HORVU4.941e-3040.91Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSEP_RICCO8.427e-3041.36Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
ORYC_ORYSJ1.101e-2937.13Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATL2_HUMAN1.877e-2937.61Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATL1_CHICK1.877e-2952.94Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
ACTN_ACTDE2.452e-2936.70Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CYSP_HEMSP3.202e-2943.58Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-675 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417745 ID=CF417745; Name=CF417745; organism=Citrus sinensis; type=EST; length=717bp
GTCAACGACGACGATGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGA
ACAATCCGAAGATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCA
AGTCCAAATTCTCCAAGACTTACGCCACCCAGGAGGAGCACGATTACCGA
TTCCGCGTGTTCAAGGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCT
GGACCCCACTGCTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGT
CTGAATTCCGCCGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCA
GCTGACGCTCAAAAGGCTCCTATTCTCCCCACCAACGATCTTCCTACTGA
CTTTGACTGGCGTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCG
CATGTGGATCGTGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCG
CACTTCTTATCGACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGT
GGACTGTGATCACGAGTGTGATCCAGAGGAATCTGGTTCATGTGACTCTG
GGTGCAATGGTGGGCTAATGAACTCTGCCTTTGAGTACATACTCAAGGCT
GGTGGGGTTGAGCGAGAGAAGGACTACCCTTACACTGGGACCGACGGTGG
TTCCTGCAAATTTGACAAAAGCAAAATTGCTGCAGCTGTATCTAATTTCA
GTGTTATTTCCTCTGAT
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