CF417745

Overview
NameCF417745
Unique NameCF417745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:183..899. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.202e-29
Identity = 81/211 (38.39%), Postives = 114/211 (54.03%), Query Frame = 1
Query:   85 HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGA-VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS 711
            HF  +  +  K Y+ +E H +R +VF +N R+       + T   G+ +FSD++  E R ++L    +      A K   L  T   P   DWR  G  V+ VK+QG+CGSCW+FS TGALE A  ++TG+++SL+EQQLVDC    +       + GC GGL + AFEYI    G+  E  YPY G D   CKF   K  A V + + I+
Sbjct:   34 HFKSWMVQHQKKYSLEEYH-HRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSEPQ---NCSATKGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQD-DHCKFQPDKAIAFVKDVANIT 232          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.182e-29
Identity = 72/193 (37.31%), Postives = 106/193 (54.92%), Query Frame = 1
Query:   88 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR------LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 648
            F  +  K  K Y +  E + R  +F+ NLR    R   + +   G+T F+DL+  E++    G + R          +D  K      + LP   DWR+ GAVT VKDQG C SCW+FS  GA+EG + + TGELV+LSEQ L++C+ E         ++GC GG + +A+E+I+K GG+  + DYPY   +G
Sbjct:   49 FESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSA--DDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNG 230          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 68/161 (42.24%), Postives = 93/161 (57.76%), Query Frame = 1
Query:  232 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 714
            F D+T  EFR+   G   +        +  +LP  ++PT  DWR+ G +T VKDQG CGSCW+FSATGALEG  F  TG+L+SL+EQ LVDC            + GCNGG M++ F Y+ + GG++ E  YPY G    +C+++    AA  + F  I S
Sbjct:   23 FGDMTNEEFRQVMNGFQYQKHRKGKQFQERLLP--EIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDC-------SGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEG-KVKTCRYNPKYSAANDTGFVDIPS 173          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.711e-28
Identity = 81/227 (35.68%), Postives = 119/227 (52.42%), Query Frame = 1
Query:   40 SDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN---DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF 699
            + G Q+ D  L+AE  +  +K+K++K+Y+ +EE   R  V++ N+R  K     +    +  T    KF D T  EFR+        + +PA A   P    +    LP   DWR+ G VT V++QG CGSCW+F+A GA+EG  F  TG L  LS Q L+DC            + GC  G  + AFEY+LK  G+E E  YPY G D G C++     +A ++++
Sbjct:   15 ASGAQAHDPKLDAE--WKDWKTKYAKSYSPKEEA-LRRAVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSI----DNIPIPA-AMTDPHAQNHVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVG-------NKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKD-GPCRYRSENASANITDY 225          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 125.561 bits (314), Expect = 2.711e-28
Identity = 68/188 (36.17%), Postives = 98/188 (52.13%), Query Frame = 1
Query:  106 KFSKTYATQEEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 666
            K+ K+Y +  E + RF +FK  LR         + +   G+ +F+DLT  EFR  +L           + +        LP+  DWR  GAV  +K QG CG CW+FSA   +EG + + TG L+SLSEQ+L+DC    +         GCNGG +   F++I+  GG+  E++YPYT  D G C  D
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQD-GECNVD 227          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28
Identity = 68/213 (31.92%), Postives = 116/213 (54.46%), Query Frame = 1
Query:   88 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-----PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 708
            F  + +++ + Y   +E   RF++FK N+   +     +  +   G+ +F+D+T +EF  Q+ GL+    LP + ++ P++  +D+     P   DWRD GAVT VK+QG CGSCW+F++   +E  + +  G LVSLSEQQ++DC          +   GC GG +N A+ +I+   GV     YPY     G+CK +    +A ++ ++ +
Sbjct:   37 FEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLS----LPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC----------AVSYGCKGGWINKAYSFIISNKGVASAAIYPYKAAK-GTCKTNGVPNSAYITRYTYV 234          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.030e-27
Identity = 75/202 (37.13%), Postives = 102/202 (50.50%), Query Frame = 1
Query:   55 SEDHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI------LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 633
            S+D L + E    LF S   K +K Y   +E  YRF +FK NL+    R  +      G+ +FSDL+  EF+ +++G      LP D    P           DLP   DWR  GAVT VK QG C SCW+FS    +EG + + TG LV LSEQ+LVDCD +           GCN G  +++ +Y+ +  G+     YPY
Sbjct:   34 SQDDLTSTERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVG-----SLPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDKQ---------SYGCNRGYQSTSLQYVAQ-NGIHLRAKYPY 220          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.030e-27
Identity = 55/122 (45.08%), Postives = 81/122 (66.39%), Query Frame = 1
Query:  334 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF 699
            + LP   DWR+ G + GVKDQG+CGSCW+FSA  A+E  + + TG L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+++K GG++ E+DYPY   +G   ++ K+     + ++
Sbjct:   16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDR--------SYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSY 129          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.757e-27
Identity = 74/204 (36.27%), Postives = 109/204 (53.43%), Query Frame = 1
Query:   88 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL-RLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG---GSCKFDKSKI 678
            F  +  K  K Y +  E + R  +F+ NLR    R   + +   G+ +F+DL+  E+     G + R  R       +    T+D   LP   DWR+ GAVT VKDQG C SCW+FS  GA+EG + + TGELV+LSEQ L++C+ E         ++GC GG + +A+E+I+  GG+  + DYPY   +G   G  K D   +
Sbjct:   56 FESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNV 250          
BLAST of CF417745 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 6.677e-27
Identity = 73/202 (36.14%), Postives = 102/202 (50.50%), Query Frame = 1
Query:   55 SEDHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 648
            S+D L + E    LF S     +K Y   +E  YRF +FK NL         + +   G+ +F+DL+  EF  +++G      +     +  I   T +LP + DWR  GAVT V+ QG+CGSCW+FSA   +EG + + TG+LV LSEQ+LVDC+             GC GG    A EY+ K  G+     YPY    G
Sbjct:   34 SQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR---------SHGCKGGYPPYALEYVAK-NGIHLRSKYPYKAKQG 225          
The following BLAST results are available for this feature:
BLAST of CF417745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CATH_PIG3.202e-2938.39Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CPR3_ARATH4.182e-2937.31Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CATL6_HUMAN9.318e-2942.24Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATJ_MOUSE2.711e-2835.68Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
ACTN_ACTCH2.711e-2836.17Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
ANAN_ANACO3.541e-2831.92Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
PAPA4_CARPA1.030e-2737.13Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CYSPL_SOLLC1.030e-2745.08Low-temperature-induced cysteine proteinase (Fragm... [more]
CPR4_ARATH1.757e-2736.27Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
PAPA3_CARPA6.677e-2736.14Caricain OS=Carica papaya PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-675 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417745 ID=CF417745; Name=CF417745; organism=Citrus sinensis; type=EST; length=717bp
GTCAACGACGACGATGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGA
ACAATCCGAAGATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCA
AGTCCAAATTCTCCAAGACTTACGCCACCCAGGAGGAGCACGATTACCGA
TTCCGCGTGTTCAAGGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCT
GGACCCCACTGCTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGT
CTGAATTCCGCCGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCA
GCTGACGCTCAAAAGGCTCCTATTCTCCCCACCAACGATCTTCCTACTGA
CTTTGACTGGCGTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCG
CATGTGGATCGTGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCG
CACTTCTTATCGACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGT
GGACTGTGATCACGAGTGTGATCCAGAGGAATCTGGTTCATGTGACTCTG
GGTGCAATGGTGGGCTAATGAACTCTGCCTTTGAGTACATACTCAAGGCT
GGTGGGGTTGAGCGAGAGAAGGACTACCCTTACACTGGGACCGACGGTGG
TTCCTGCAAATTTGACAAAAGCAAAATTGCTGCAGCTGTATCTAATTTCA
GTGTTATTTCCTCTGAT
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