CF417764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417764 vs. ExPASy Swiss-Prot
Match: GLNA2_CHLRE (Glutamine synthetase, chloroplastic OS=Chlamydomonas reinhardtii GN=GLN2 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 7.588e-59 Identity = 103/190 (54.21%), Postives = 134/190 (70.53%), Query Frame = 2 Query: 17 NSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIE-GDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSF 583 + KV+AE W+G EQEYT+L + GWP G +P PQGP+YCG GA+ +FGR +A+AH +AC+ AG+ ISG N EVMPGQWEYQ+GP + GD + SR+LL R+ E G+V + +PKP+ GDWNG G HTN+STK R GG + I++A+ LS H EHI+ YG GNE RLTGKHET I++F Sbjct: 141 DDKVTAEDCWYGFEQEYTMLAKTSGHIYGWPAGGFPAPQGPFYCGVGAESAFGRPLAEAHMEACMKAGLVISGINAEVMPGQWEYQIGPVGPLALGDEVMLSRWLLHRLGEDFGIVSTFNPKPVRTGDWNGTGAHTNFSTKGMRVPGGMKVIEEAVEKLSKTHIEHITQYGIGNEARLTGKHETCDINTF 330
BLAST of CF417764 vs. ExPASy Swiss-Prot
Match: GLNA_MIMIV (Putative glutamine synthetase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R565 PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.481e-54 Identity = 96/187 (51.34%), Postives = 127/187 (67.91%), Query Frame = 2 Query: 23 KVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSF 583 K E PW+G+EQEY + +++ P+G Y QG YYC G+ ++GR I+D H +ACLYAGI ISGTN EV PGQ E+Q+GP GIDA D +W +R++LE+I+E + PKP++GDWNG+GCHTN+ST+S R EGG I +A+ L +H EH+ YG N+ RLTG HETASID F Sbjct: 119 KYQNEKPWYGLEQEYFIFRKDTNQPIGME---YASKQGQYYCSVGSQNAYGRRISDEHMEACLYAGIKISGTNLEVAPGQHEFQIGPVEGIDAADQLWIARFILEKISEHYDRYIVYHPKPLQGDWNGSGCHTNFSTESMRSEGGLTVIMEAVDKLRTKHSEHMKVYGIDNDLRLTGDHETASIDEF 302
BLAST of CF417764 vs. ExPASy Swiss-Prot
Match: GLNA2_STRVR (Glutamine synthetase 2 OS=Streptomyces viridochromogenes GN=glnII PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 2.364e-52 Identity = 99/184 (53.80%), Postives = 125/184 (67.93%), Query Frame = 2 Query: 23 KVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHK--EHISAYGEGNERRLTGKHETA 568 + +A+ P FGIEQEYT Q +PLG+P G +P PQG YYCG GAD+ FGRD+ +AH CL AG+ ISG N EVMPGQWE+QVGP ++ DH+W +R+LL R E V +LDPKP++GDWNGAG HTN+STK+ RE Y+ I A +L K +H+ YG G + RLTG HETA Sbjct: 102 RFAAQEPIFGIEQEYTFFQDG--YPLGFPKGGFPAPQGGYYCGVGADEIFGRDVVEAHLDNCLKAGLAISGINAEVMPGQWEFQVGPVSPLEVSDHLWVARWLLYRTAEDFDVAATLDPKPVKGDWNGAGAHTNFSTKAMRE--SYDAIITAAESLGEGSKPLDHVKNYGAGIDDRLTGLHETA 281
BLAST of CF417764 vs. ExPASy Swiss-Prot
Match: GLNA2_STRHY (Glutamine synthetase 2 OS=Streptomyces hygroscopicus GN=glnB PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 8.408e-50 Identity = 99/190 (52.11%), Postives = 125/190 (65.79%), Query Frame = 2 Query: 23 KVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGA-YPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHK--EHISAYGEGNERRLTGKHETASIDSF 583 + + + P FGIEQEYT L+ + PLG+P G YP PQ YYCG GAD FGR+I + H CL AG+ +SG N EVMPGQWE+QVG ++ DH+W +R+LL R+ E+ GV SLD KP +GDWNGAG HTN+ST++ RE GY+ I A L K EH+ YG G E RLTG HETA D++ Sbjct: 98 RFAGQEPIFGIEQEYTFLKGDR--PLGFPEGGGYPAPQADYYCGVGADAIFGREIVEKHLDLCLAAGLGLSGINAEVMPGQWEFQVGALPPLEVSDHMWVARWLLHRVAEEFGVTASLDAKPAKGDWNGAGAHTNFSTRAMRE--GYDPIITACEALGQDDKPLEHVRQYGTGIEDRLTGAHETAPWDAY 283
BLAST of CF417764 vs. ExPASy Swiss-Prot
Match: GLNA2_FRAAL (Glutamine synthetase 2 OS=Frankia alni GN=glnII PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 5.450e-49 Identity = 97/176 (55.11%), Postives = 111/176 (63.07%), Query Frame = 2 Query: 41 PWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETA 568 P FGIEQEYT + P GWP YP PQGPYYCG G K GR I + H +ACL AG+ I GTN EVM GQWE+Q+G GD IW R+LL RI E GV +S KPI GDWNGAG HTN+STK T E G++ I L R EH++ YG+G E RLTGKHETA Sbjct: 103 PMFGIEQEYTFFKDGR--PYGWPEVGYPAPQGPYYCGVGGSKMPGRQIVERHTQACLDAGLAIEGTNAEVMMGQWEFQIGVLPAPAIGDQIWLGRWLLHRIAEDYGVEVSFAAKPIPGDWNGAGAHTNFSTKQTME--GWDAIVTCCEALGTRVTEHVTHYGKGIEDRLTGKHETA 274
BLAST of CF417764 vs. ExPASy Swiss-Prot
Match: GLNA2_RHILP (Glutamine synthetase 2 OS=Rhizobium leguminosarum bv. phaseoli GN=glnII PE=1 SV=3) HSP 1 Score: 159.073 bits (401), Expect = 1.488e-38 Identity = 84/186 (45.16%), Postives = 107/186 (57.53%), Query Frame = 2 Query: 35 EVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADK--SFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPI-EGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSF 583 E WFG EQEY Q PLG+P YP PQ PYY G G R+I + H CL AGIN G N EV GQWE+Q+ A D IW +RYLL+R+TE+ G+ + KP+ + DWNG+G H N+STK RE GG E + + + +HI+ YG N++RLTGKHETA + F Sbjct: 100 EDAWFGFEQEYFFYQNGR--PLGFPEQGYPAPQ-PYYTGVGYSNVGDVAREIVEEHLDLCLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADQIWMARYLLQRLTEKYGIDIEYHCKPLGDTDWNGSGMHCNFSTKYLREVGGKEYFEALMASSDKNLMDHIAVYGPDNDKRLTGKHETAPWNKF 282
BLAST of CF417764 vs. ExPASy Swiss-Prot
Match: GLNA2_BRAJA (Glutamine synthetase 2 OS=Bradyrhizobium japonicum GN=glnII PE=3 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 5.653e-38 Identity = 79/183 (43.17%), Postives = 103/183 (56.28%), Query Frame = 2 Query: 44 WFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADK--SFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPI-EGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSF 583 WFG EQEY + PLG+P YP PQGPYY G G R I + H CL AGIN G N EV GQWE+Q+ A D +W +RYL+ R+TE+ G+ + KP+ + DWNG+G H N+ST+ R GG E + + +HI+ YG N++RLTGKHETA + F Sbjct: 105 WFGFEQEYFFYKDGR--PLGFPTSGYPAPQGPYYTGVGFSNVGDVARKIVEEHLDLCLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADEMWMARYLMLRLTEKYGIDIEFHCKPLGDTDWNGSGMHANFSTEYMRTVGGKEYFEALMAAFDKNLMDHIAVYGPDNDKRLTGKHETAPWNKF 285
BLAST of CF417764 vs. ExPASy Swiss-Prot
Match: GLNA2_RHIME (Glutamine synthetase 2 OS=Rhizobium meliloti GN=glnII PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.066e-36 Identity = 81/186 (43.55%), Postives = 101/186 (54.30%), Query Frame = 2 Query: 35 EVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADK--SFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPI-EGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSF 583 E WFG EQEY + PLG+P YP PQGPYY G G R I + H CL AGIN G N EV GQWE+Q+ A D + +RYLL R+TE+ G+ + KP+ + DWNG+G H N+ST RE GG + + + +HI+ YG N RLTGKHETA D F Sbjct: 102 EGAWFGFEQEYFFYKNGR--PLGFPEQGYPAPQGPYYTGVGYKNVGDVARQIVEEHLDICLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADEVCVARYLLVRLTEKYGIDVEFHCKPLGDTDWNGSGMHANFSTAYLREVGGQDYFEALMAAFEKNLHDHINVYGPDNHLRLTGKHETAPWDKF 285 The following BLAST results are available for this feature:
BLAST of CF417764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417764 ID=CF417764; Name=CF417764; organism=Citrus sinensis; type=EST; length=583bpback to top |