CF417768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_DESHD (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.416e-22 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 472 +IKPLGDRV++K +EEKT GI +P TA+ KPQ GEVVAVG GK ++ + VK G +VIYSKYAGTE++++G +LIL+E D++ ++ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93 HSP 2 Score: 73.1738 bits (178), Expect = 1.584e-12 Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 ++KPL DRV IK EE T G+++ + +KEKP G V+AVGPG + E+G R L + G+ V+YSKYAG + K Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKM-EKGERIVLDVKVGDRVIYSKYAGTEVK 75
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_THETN (10 kDa chaperonin OS=Thermoanaerobacter tengcongensis GN=groS PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.379e-22 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + +++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQYIDGKRVEPEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 70.8626 bits (172), Expect = 7.861e-12 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 LKPL DRV +KV ++EE T GG++L +KEKP G V+AVGPG +G R + G+ V++SKYAG + K Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQY-IDGKRVEPEVKVGDRVIFSKYAGTEVK 75
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_DESVM (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groS PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.379e-22 Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 ++KPL DRVLVK EEKT GG+F+P TA+ KP GEVVA G GK KL ++VK G V++SKYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIKLDGVEHLVMREDDILAIIE 95 HSP 2 Score: 85.5001 bits (210), Expect = 3.084e-16 Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG + E+G +++ G+TV++SKYAG + K Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIK 76
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_DESDG (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.867e-21 Identity = 48/94 (51.06%), Postives = 71/94 (75.53%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 ++KPL DRVLVK EEKT GG+++P TA+ KP GEV+AVG GKT K + ++VK G V+++KYAGTE++ +G +HL++REDD++ I++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVKLDGVDHLVMREDDILAIIQ 95 HSP 2 Score: 81.2629 bits (199), Expect = 5.816e-15 Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G VIAVGPG ++G +++ G+ V+++KYAG + K Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVK 76
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. GN=groS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.094e-21 Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 194 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ GEVVAVG GK + KL + +K G +V+YSKYAGTE++ +++L E D++ I++ Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103 HSP 2 Score: 88.1965 bits (217), Expect = 4.758e-17 Identity = 38/77 (49.35%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 485 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 + LKPL DRV +K+A+ +E TAGG+ L + +KEKP +G V+AVGPG ++EG P+ + G+ V+YSKYAG + K Sbjct: 8 VSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVK 84
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.094e-21 Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 194 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ GEVVAVG GK + KL + +K G +V+YSKYAGTE++ +++L E D++ I++ Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103 HSP 2 Score: 88.5817 bits (218), Expect = 3.643e-17 Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 476 TDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 T + LKPL DRV +K+A+ +E TAGG+ L + +KEKP +G V+AVGPG ++EG P+ + G+ V+YSKYAG + K Sbjct: 5 TLNVSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVK 84
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_LAWIP (10 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.264e-21 Identity = 48/93 (51.61%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 472 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVAVG GK KL ++VK G V+++KYAGTE++ +G HL++REDD++ ++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94 HSP 2 Score: 85.8853 bits (211), Expect = 2.361e-16 Identity = 39/75 (52.00%), Postives = 56/75 (74.67%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+AVGPG ++G P+++ G+TV+++KYAG + K Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVK 76
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_LAWIN (10 kDa chaperonin OS=Lawsonia intracellularis GN=groS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.264e-21 Identity = 48/93 (51.61%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 472 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVAVG GK KL ++VK G V+++KYAGTE++ +G HL++REDD++ ++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94 HSP 2 Score: 85.8853 bits (211), Expect = 2.361e-16 Identity = 39/75 (52.00%), Postives = 56/75 (74.67%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+AVGPG ++G P+++ G+TV+++KYAG + K Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVK 76
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_EXISA (10 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 472 +KPLGDRV++++ EEKT GGI LP TA+ KPQ G+VVAVG G+ + K +D+ VK VIYSKYAGTE++ +G +LI+RE D++ I+ Sbjct: 2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVKHDGKEYLIVRESDILAIV 93 HSP 2 Score: 78.9518 bits (193), Expect = 2.887e-14 Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 LKPL DRV I+V E EE T GG++L + +KEKP G V+AVG G + +EG R L + + V+YSKYAG + K Sbjct: 2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVK 75
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_DESDA (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20 Identity = 47/94 (50.00%), Postives = 71/94 (75.53%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKT--KLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +KPL DRVLVK EEKT GG+++P TA+ KP G+VVAVG GK VG + ++VK G +V+++KYAGTE++ +G +HL++RE+D++ I++ Sbjct: 3 LKPLNDRVLVKRLETEEKTAGGLYIPDTAKEKPSKGQVVAVGPGK-VGDNGERTALAVKAGDEVLFNKYAGTEVKLDGVDHLVMREEDILAIID 95 HSP 2 Score: 85.5001 bits (210), Expect = 3.084e-16 Identity = 39/74 (52.70%), Postives = 53/74 (71.62%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 LKPLNDRV +K E EE TAGGL + + +KEKPS G V+AVGPG + + G R L++ G+ V+++KYAG + K Sbjct: 3 LKPLNDRVLVKRLETEEKTAGGLYIPDTAKEKPSKGQVVAVGPGKVGDNGERTALAVKAGDEVLFNKYAGTEVK 76 The following BLAST results are available for this feature:
BLAST of CF417768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 494
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417768 ID=CF417768; Name=CF417768; organism=Citrus sinensis; type=EST; length=716bpback to top |