CF417768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_CLOPE (10 kDa chaperonin OS=Clostridium perfringens GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20 Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 SIKPLGDRV++K EE T GI + TA+ +PQ EVVAVG G V + ++ VK G +V+YSKYAGTE++F G + ILR+DD++ I+E Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94 HSP 2 Score: 73.1738 bits (178), Expect = 1.584e-12 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 +KPL DRV IK EAEETT G+++T +KE+P V+AVGPG + +G R + + G+ V+YSKYAG + K Sbjct: 3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-VDGKRTEMEVKIGDKVLYSKYAGTEVK 75
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_CLOP1 (10 kDa chaperonin OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20 Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 SIKPLGDRV++K EE T GI + TA+ +PQ EVVAVG G V + ++ VK G +V+YSKYAGTE++F G + ILR+DD++ I+E Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94 HSP 2 Score: 73.1738 bits (178), Expect = 1.584e-12 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 +KPL DRV IK EAEETT G+++T +KE+P V+AVGPG + +G R + + G+ V+YSKYAG + K Sbjct: 3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-VDGKRTEMEVKIGDKVLYSKYAGTEVK 75
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_CHLL2 (10 kDa chaperonin OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20 Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 ++KPL DRV+VK EEKT GG+F+P T + KPQ GEVVAVG GK + LD+ V G +V+Y KY+GTE+ G ++LI+RE D+ IL+ Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLFIPDTGKEKPQYGEVVAVGPGKVADNGQLLDMQVTVGKKVLYGKYSGTEVNVEGEDYLIMRESDIFAILD 95 HSP 2 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 709 +LKPL DRV +K A AEE T GGL + + KEKP G V+AVGPG + + G + + G V+Y KY+G + Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLFIPDTGKEKPQYGEVVAVGPGKVADNGQLLDMQVTVGKKVLYGKYSGTE 74
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_PELPB (10 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20 Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 472 ++KPL DRV+VK EEKT GG+++P T + KPQ GEVVAVG GK + L++ VK G++V+Y KY+GTE+ G ++LI+RE D+ IL Sbjct: 2 NLKPLSDRVIVKPAAAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKIADNGQLLEMQVKVGSKVLYGKYSGTEVSVEGEDYLIMRESDIFAIL 94 HSP 2 Score: 72.4034 bits (176), Expect = 2.702e-12 Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 709 +LKPL+DRV +K A AEE T GGL + + KEKP G V+AVG G + + G + + G+ V+Y KY+G + Sbjct: 2 NLKPLSDRVIVKPAAAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKIADNGQLLEMQVKVGSKVLYGKYSGTE 74
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_MYXXD (10 kDa chaperonin OS=Myxococcus xanthus (strain DK 1622) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20 Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 I+PL DR++VK E KT GG+F+P TA+ KP G+V+AVG GK K+ + +K G +++SKYAGTE++ +G HLILRE+DV+G++E Sbjct: 3 IRPLQDRLIVKRVAEENKTKGGLFIPDTAKEKPLEGKVIAVGNGKVQEDGKVRPLDIKAGDTILFSKYAGTEIKLDGEEHLILREEDVLGVIE 95 HSP 2 Score: 75.485 bits (184), Expect = 3.192e-13 Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 ++PL DR+ +K E T GGL + + +KEKP G VIAVG G + E+G +PL I G+T+++SKYAG + K Sbjct: 3 IRPLQDRLIVKRVAEENKTKGGLFIPDTAKEKPLEGKVIAVGNGKVQEDGKVRPLDIKAGDTILFSKYAGTEIK 76
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_CLOPS (10 kDa chaperonin OS=Clostridium perfringens (strain SM101 / Type A) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20 Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 SIKPLGDRV++K EE T GI + TA+ +PQ EVVAVG G + + ++ VK G +V+YSKYAGTE++F G + ILR+DD++ I+E Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIIDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94 HSP 2 Score: 72.7886 bits (177), Expect = 2.069e-12 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 +KPL DRV IK EAEETT G+++T +KE+P V+AVGPG + +G R + + G+ V+YSKYAG + K Sbjct: 3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-IDGKRTEMEVKIGDKVLYSKYAGTEVK 75
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_BACHD (10 kDa chaperonin OS=Bacillus halodurans GN=groS PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20 Identity = 49/92 (53.26%), Postives = 66/92 (71.74%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 472 +KPLGDRV+++ EEKT GI LP TA+ KPQ G VVAVG G+ T K+ + VK G VI+SKYAGTE++++G +LILRE D++ I+ Sbjct: 2 LKPLGDRVVIEQVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVTENGEKIALEVKEGDSVIFSKYAGTEVKYDGKEYLILRESDILAII 93 HSP 2 Score: 75.8702 bits (185), Expect = 2.444e-13 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 LKPL DRV I+ E EE TA G++L + +KEKP G V+AVG G + E G + L + G++V++SKYAG + K Sbjct: 2 LKPLGDRVVIEQVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVTENGEKIALEVKEGDSVIFSKYAGTEVK 75
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_GEOSL (10 kDa chaperonin OS=Geobacter sulfurreducens GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.843e-20 Identity = 46/94 (48.94%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +++PL DR+LVK E KT GGIF+P TA+ KPQ GE+VAVG GK K + + +K G +V++ KYAGT+++ G LI+REDD++G++E Sbjct: 2 NLRPLQDRILVKRIEEETKTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPVDLKVGDKVLFGKYAGTDIKIEGQEFLIMREDDILGVIE 95 HSP 2 Score: 72.0182 bits (175), Expect = 3.529e-12 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 +L+PL DR+ +K E E TAGG+ + + +KEKP G ++AVG G E+G P+ + G+ V++ KYAG D K Sbjct: 2 NLRPLQDRILVKRIEEETKTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPVDLKVGDKVLFGKYAGTDIK 76
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_GEOSF (10 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.843e-20 Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 ++P+ DR++VK E KT GGI++P TA+ KPQ GEVVAVG GK K L + VK G +V++ KY+GTE++ G ++LI+REDD++G++E Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIYIPETAKEKPQEGEVVAVGNGKRTEDGKILPLDVKVGDKVLFGKYSGTEVKVEGQDYLIMREDDILGVIE 95 HSP 2 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 L+P+ DR+ +K E E TAGG+ + E +KEKP G V+AVG G E+G PL + G+ V++ KY+G + K Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIYIPETAKEKPQEGEVVAVGNGKRTEDGKILPLDVKVGDKVLFGKYSGTEVK 76
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_CYAA5 (10 kDa chaperonin OS=Cyanothece sp. (strain ATCC 51142) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.843e-20 Identity = 46/91 (50.55%), Postives = 67/91 (73.63%), Query Frame = 2 Query: 194 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 463 +++KPLGDR+ VK+ EEKT GGI LP AQ KPQ GEVVAVG GK ++ ++ VK G +V+YSKYAGT+++ +G ++++L E D++ Sbjct: 9 STVKPLGDRIFVKVSPAEEKTAGGILLPDNAQEKPQIGEVVAVGPGKRNDDGSRSELDVKVGDKVLYSKYAGTDVKLSGEDYVLLSEKDIL 99 HSP 2 Score: 92.0485 bits (227), Expect = 3.295e-18 Identity = 41/77 (53.25%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 485 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 + +KPL DR+F+KV+ AEE TAGG+LL + ++EKP IG V+AVGPG +++G+R L + G+ V+YSKYAG D K Sbjct: 8 VSTVKPLGDRIFVKVSPAEEKTAGGILLPDNAQEKPQIGEVVAVGPGKRNDDGSRSELDVKVGDKVLYSKYAGTDVK 84 The following BLAST results are available for this feature:
BLAST of CF417768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 494
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417768 ID=CF417768; Name=CF417768; organism=Citrus sinensis; type=EST; length=716bpback to top |