CF417768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_OCEIH (10 kDa chaperonin OS=Oceanobacillus iheyensis GN=groS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19 Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 472 IKPLGDRV++++ EE T GI LP +A+ KPQ G+VVAVG G+ K+ + V G ++I+SK+AGTE+++ G +LILRE+D++ I+ Sbjct: 2 IKPLGDRVVIELVEQEETTASGIVLPDSAKEKPQEGKVVAVGSGRVENGEKIALEVSEGDRIIFSKFAGTEVKYEGTEYLILRENDILAII 92 HSP 2 Score: 72.4034 bits (176), Expect = 2.702e-12 Identity = 34/74 (45.95%), Postives = 53/74 (71.62%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 +KPL DRV I++ E EETTA G++L +++KEKP G V+AVG G + E G + L ++ G+ +++SK+AG + K Sbjct: 2 IKPLGDRVVIELVEQEETTASGIVLPDSAKEKPQEGKVVAVGSGRV-ENGEKIALEVSEGDRIIFSKFAGTEVK 74
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_CYAP8 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 8801) GN=groS PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19 Identity = 45/95 (47.37%), Postives = 68/95 (71.58%), Query Frame = 2 Query: 194 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ GE+V VG GK ++ + VK G +V+YSKYAGT+++ G ++++L E D++ +++ Sbjct: 9 STVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQIGEIVTVGPGKRNDDGSRSEPEVKVGDKVLYSKYAGTDIKLGGEDYVLLSEKDILAVVD 103 HSP 2 Score: 89.3521 bits (220), Expect = 2.136e-17 Identity = 39/77 (50.65%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 485 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 + +KPL DRVF+KV+ +EE TAGG+LL + +KEKP IG ++ VGPG +++G+R + G+ V+YSKYAG D K Sbjct: 8 VSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQIGEIVTVGPGKRNDDGSRSEPEVKVGDKVLYSKYAGTDIK 84
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_CHLPD (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain DSM 266) GN=groS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 ++KPL DRV+VK EEKT GG+ +P T + KPQ GEVVAVG GK + L++ +K G +V+Y KY+GTE+ G ++LI+RE D+ IL+ Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLIIPDTGKEKPQYGEVVAVGTGKVADSGQLLEMQIKVGQKVLYGKYSGTEVSVEGEDYLIMRESDIFAILD 95 HSP 2 Score: 72.0182 bits (175), Expect = 3.529e-12 Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 709 +LKPL DRV +K A AEE T GGL++ + KEKP G V+AVG G + + G + I G V+Y KY+G + Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLIIPDTGKEKPQYGEVVAVGTGKVADSGQLLEMQIKVGQKVLYGKYSGTE 74
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_BACTR (10 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19 Identity = 46/92 (50.00%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 472 IKPLGDRV+++I EEKT GI LP TA+ KPQ G+VVAVG+G+ + ++ V+ G ++I+SKYAGTE++++G +LILRE D++ ++ Sbjct: 2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93 HSP 2 Score: 72.0182 bits (175), Expect = 3.529e-12 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 +KPL DRV I++ E EE TA G++L + +KEKP G V+AVG G + + G R + G+ +++SKYAG + K Sbjct: 2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVK 75
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_GEOUR (10 kDa chaperonin OS=Geobacter uraniireducens (strain Rf4) GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19 Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 ++P+ DR++VK E KT GGIF+P TA+ KP GEVVAVG GK K L + VK G +V++ KY+GTE++ G + LI+REDD++G++E Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIKVEGQDFLIMREDDILGVIE 95 HSP 2 Score: 71.633 bits (174), Expect = 4.609e-12 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 L+P+ DR+ +K E E TAGG+ + E +KEKP G V+AVG G E+G PL + G+ V++ KY+G + K Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIK 76
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_GEOMG (10 kDa chaperonin OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19 Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 ++PL DR+LVK E+ T GGIF+P TA+ KPQ GE+VAVG GK K + I +K G +V++ KYAGT+++ G + LI+REDD++G++E Sbjct: 3 LRPLQDRILVKRIEEEQVTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPIDLKVGDKVLFGKYAGTDIKVEGEDFLIMREDDILGVIE 95 HSP 2 Score: 73.559 bits (179), Expect = 1.213e-12 Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 L+PL DR+ +K E E+ TAGG+ + + +KEKP G ++AVG G E+G P+ + G+ V++ KYAG D K Sbjct: 3 LRPLQDRILVKRIEEEQVTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPIDLKVGDKVLFGKYAGTDIK 76
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_DESAA (10 kDa chaperonin OS=Desulfatibacillum alkenivorans (strain AK-01) GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19 Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 ++PL DR+LVK E KT GGI +P TA+ KP GE+VAVG G+ TK+ + VK G +V++ KY+GTE++ G +LI+REDDV+GI++ Sbjct: 3 LQPLADRILVKRLAEETKTKGGIIIPDTAKEKPAEGEIVAVGPGRNAEDGTKIALEVKVGDRVLFGKYSGTEVKIEGEEYLIMREDDVLGIVQ 95
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_CLOAB (10 kDa chaperonin OS=Clostridium acetobutylicum GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19 Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 I+PLGDRV++K EE T GI LPS+A+ KPQ EVVAVG G V ++ + VK G +V +SKY+GTE++ + LILR+DD++GI+E Sbjct: 3 IRPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGVVDGKEIQMQVKTGDKVFFSKYSGTEIKVDNEELLILRQDDILGIVE 94 HSP 2 Score: 68.5514 bits (166), Expect = 3.901e-11 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 ++PL DRV IK EAEETT G++L ++KEKP + V+AVGPG + +G + + G+ V +SKY+G + K Sbjct: 3 IRPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGV-VDGKEIQMQVKTGDKVFFSKYSGTEIK 75
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_MICAN (10 kDa chaperonin OS=Microcystis aeruginosa (strain NIES-843) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.980e-19 Identity = 42/77 (54.55%), Postives = 59/77 (76.62%), Query Frame = 2 Query: 485 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 + +KPL DRVF+KV+ +EE TAGG+ L +A+KEKP IG V+AVGPG +++G+R P+ + G+ V+YSKYAG D K Sbjct: 8 VTTVKPLGDRVFVKVSPSEEKTAGGIFLPDAAKEKPQIGEVVAVGPGKRNDDGSRTPVEVGVGDKVLYSKYAGTDIK 84 HSP 2 Score: 94.7449 bits (234), Expect = 5.084e-19 Identity = 47/91 (51.65%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 194 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 463 T++KPLGDRV VK+ EEKT GGIFLP A+ KPQ GEVVAVG GK ++ + V G +V+YSKYAGT+++ G ++L E D++ Sbjct: 9 TTVKPLGDRVFVKVSPSEEKTAGGIFLPDAAKEKPQIGEVVAVGPGKRNDDGSRTPVEVGVGDKVLYSKYAGTDIKLGGEEFVLLSEKDIL 99
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_LACPL (10 kDa chaperonin OS=Lactobacillus plantarum GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.980e-19 Identity = 46/91 (50.55%), Postives = 69/91 (75.82%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 469 +KPLGDRV+++ + EE+T GGI + + A+ KPQ+G+VVAV +G+ + TK+D SVK G QV++ KYAGTE+++ GA +L+L E D+V I Sbjct: 2 LKPLGDRVILQQQEEEEQTIGGIVIANNAKEKPQSGKVVAVNDGRVLDNGTKVDPSVKVGDQVLFDKYAGTEVKYQGAKYLVLHEKDIVAI 92 The following BLAST results are available for this feature:
BLAST of CF417768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 494
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417768 ID=CF417768; Name=CF417768; organism=Citrus sinensis; type=EST; length=716bpback to top |