CF417768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_STAAC (10 kDa chaperonin OS=Staphylococcus aureus (strain COL) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_STAAB (10 kDa chaperonin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_STAA9 (10 kDa chaperonin OS=Staphylococcus aureus (strain JH9) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_STAA8 (10 kDa chaperonin OS=Staphylococcus aureus (strain NCTC 8325) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_STAA3 (10 kDa chaperonin OS=Staphylococcus aureus (strain USA300) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_STAA2 (10 kDa chaperonin OS=Staphylococcus aureus (strain JH1) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_STAA1 (10 kDa chaperonin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_RHOFD (10 kDa chaperonin OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 38/93 (40.86%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLD-ISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 ++PL DRV+VK E KT GI +P +A KP GEV+AVG GK K ++ ++VK G +V++ KY+G ++ G L+++EDD+ ++E Sbjct: 3 LRPLHDRVIVKRVENETKTASGIVIPDSAAEKPDQGEVLAVGPGKKNDKGEISPMAVKVGDRVLFGKYSGQTVKVAGDELLVMKEDDLFAVVE 95 HSP 2 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 30/74 (40.54%), Postives = 50/74 (67.57%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 L+PL+DRV +K E E TA G+++ +++ EKP G V+AVGPG +++G P+++ G+ V++ KY+G K Sbjct: 3 LRPLHDRVIVKRVENETKTASGIVIPDSAAEKPDQGEVLAVGPGKKNDKGEISPMAVKVGDRVLFGKYSGQTVK 76
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_THICR (10 kDa chaperonin OS=Thiomicrospira crunogena (strain XCL-2) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13 Identity = 39/95 (41.05%), Postives = 64/95 (67.37%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHL-ILREDDVVGILE 475 +IKPL DRV+V+ ++++ GGI LP +AQ K GEVVAVG GK + + ++VK G +V++ +Y+G E++ + L ++REDD++ I+E Sbjct: 2 NIKPLHDRVVVRQVEEQKESTGGILLPGSAQEKENLGEVVAVGPGKAADNGSIIPMTVKVGDKVMFGQYSGQEVKDDAGKPLKVMREDDIIAIVE 96 HSP 2 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 28/75 (37.33%), Postives = 53/75 (70.67%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 ++KPL+DRV ++ E ++ + GG+LL +++EK ++G V+AVGPG + G+ P+++ G+ VM+ +Y+G + K Sbjct: 2 NIKPLHDRVVVRQVEEQKESTGGILLPGSAQEKENLGEVVAVGPGKAADNGSIIPMTVKVGDKVMFGQYSGQEVK 76
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_STACT (10 kDa chaperonin OS=Staphylococcus carnosus (strain TM300) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13 Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 709 LKPL +RV IK E+E+TT G++LTE +KEK + G VIAVGPG L + G R + G+TV++ +YAG++ Sbjct: 2 LKPLGNRVIIKRVESEQTTKSGIVLTEKAKEKSNEGKVIAVGPGRLLDNGERVTPEVKEGDTVVFEQYAGSE 73 The following BLAST results are available for this feature:
BLAST of CF417768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 494
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417768 ID=CF417768; Name=CF417768; organism=Citrus sinensis; type=EST; length=716bpback to top |