CF417768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_EHRSE (10 kDa chaperonin OS=Ehrlichia sennetsu GN=groS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11 Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTD-GGIFLPSTAQTKPQAGEVVAVGEG-KTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +K L D+VL I+ EEK GGI++P +A+ KP G VVAVG G K T + VK G V+Y K+AG+E+E +G +++++E D++ I E Sbjct: 5 LKMLHDQVL--IRPHEEKDGAGGIYIPDSAKKKPTMGLVVAVGAGAKNSNGTFQPVCVKEGDIVLYRKWAGSEVEHDGVEYVVMKETDIIAIKE 96
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_STAS1 (10 kDa chaperonin OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=groS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 32/94 (34.04%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILET 478 +KPLG+RV+++ E+ T GI L +A+ K G ++AVG G+ + +++ V G +V++ +YAGTE++ +LI+ E+D++ I+E+ Sbjct: 2 LKPLGNRVIIQKSEQEQTTKSGIVLTDSAKEKSNEGTIIAVGAGRILKDGSRVAPEVNEGDKVVFQQYAGTEVKRGDETYLIVNEEDILAIIES 95
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_PSEPF (10 kDa chaperonin OS=Pseudomonas fluorescens (strain Pf0-1) GN=groS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 475 ++PL DRV+++ E+KT GGI LP +A K GE++AVG GK + ++ +SVK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEEKKTAGGIVLPGSAAEKANHGEILAVGPGKALESGEVRALSVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVIE 96
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_MACCJ (10 kDa chaperonin OS=Macrococcus caseolyticus (strain JCSC5402) GN=groS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 32/93 (34.41%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +KP G+RV+++ E T GI L +A+ K G VVAVG G+ + +++I V G +V+Y + GTE++ ++++L+E+D++ I+E Sbjct: 2 LKPYGNRVVIQKTERETTTASGIVLTDSAKEKTNEGTVVAVGTGRILNNGERVEIGVSVGDRVVYEPFGGTEVKTGDESYIVLKEEDIIAIVE 94 The following BLAST results are available for this feature:
BLAST of CF417768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 494
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417768 ID=CF417768; Name=CF417768; organism=Citrus sinensis; type=EST; length=716bpback to top |