CF417768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_CLOB8 (10 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.980e-19 Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 +IKPLG+RV++K EEKT GI L TA+ +PQ EVVAVG G V ++ + VK G +V+YSKYAGTE++ +G + IL++DD++ I+E Sbjct: 2 NIKPLGERVVIKKLEAEEKTKSGIVLTGTAKERPQEAEVVAVGPGAVVDGNRVAMEVKVGDKVLYSKYAGTEVKVDGEEYTILKQDDILAIVE 94 HSP 2 Score: 72.7886 bits (177), Expect = 2.069e-12 Identity = 36/75 (48.00%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 ++KPL +RV IK EAEE T G++LT +KE+P V+AVGPG + +GNR + + G+ V+YSKYAG + K Sbjct: 2 NIKPLGERVVIKKLEAEEKTKSGIVLTGTAKERPQEAEVVAVGPGAV-VDGNRVAMEVKVGDKVLYSKYAGTEVK 75
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_CHLPB (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain BS1) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.980e-19 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 ++KPL DRV+VK EEKT GG+++P T + KPQ GEVVAVG GK + L++ V G +V+Y KY+GTE+ G ++LI+RE D+ IL+ Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEVAVEGEDYLIMRESDIFAILD 95 HSP 2 Score: 74.7146 bits (182), Expect = 5.444e-13 Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 709 +LKPL DRV +K A AEE T GGL + + KEKP G V+AVG G + + G + +A GN V+Y KY+G + Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTE 74
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_BACCN (10 kDa chaperonin OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19 Identity = 43/92 (46.74%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 472 +KPLGDRV++++ EEKT GI LP TA+ KPQ G+V+AVG G+ + ++ + V G ++I+SKYAGTE+++ G ++LILRE D++ ++ Sbjct: 2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDRIIFSKYAGTEVKYEGTDYLILRESDILAVI 93 HSP 2 Score: 78.9518 bits (193), Expect = 2.887e-14 Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 LKPL DRV I++ +AEE TA G++L + +KEKP G VIAVG G + E G R L +A G+ +++SKYAG + K Sbjct: 2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDRIIFSKYAGTEVK 75
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_ANASP (10 kDa chaperonin OS=Anabaena sp. (strain PCC 7120) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19 Identity = 44/94 (46.81%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 194 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 472 +++KPLGDRV VK+ EEKT GG++LP TA+ KPQ GEVVA+G GK ++ ++ VK G +V+YSKYAGT+++ +++L E D++ ++ Sbjct: 9 STVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDKVLYSKYAGTDVKLGTEEYVLLSEKDILAVV 102 HSP 2 Score: 88.1965 bits (217), Expect = 4.758e-17 Identity = 39/77 (50.65%), Postives = 57/77 (74.03%), Query Frame = 2 Query: 485 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 + +KPL DRVF+KV+ +EE TAGGL L + +KEKP +G V+A+G G +++G+R+ L + G+ V+YSKYAG D K Sbjct: 8 VSTVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDKVLYSKYAGTDVK 84
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_TRIEI (10 kDa chaperonin OS=Trichodesmium erythraeum (strain IMS101) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19 Identity = 45/94 (47.87%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 194 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 472 +++KPLG+RV VK+ EEKT GGI LP +A+ KPQ GEVV+ G GK T+ ++ VK G +V+YSKYAGT+++ G +++L E D++ I+ Sbjct: 9 STVKPLGERVFVKVSESEEKTAGGILLPDSAKEKPQVGEVVSAGPGKRNDDGTRAEMEVKVGDKVLYSKYAGTDIKLGGDEYVLLAEKDILAIV 102 HSP 2 Score: 90.8929 bits (224), Expect = 7.341e-18 Identity = 39/80 (48.75%), Postives = 59/80 (73.75%), Query Frame = 2 Query: 476 TDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 T + +KPL +RVF+KV+E+EE TAGG+LL +++KEKP +G V++ GPG +++G R + + G+ V+YSKYAG D K Sbjct: 5 TLSVSTVKPLGERVFVKVSESEEKTAGGILLPDSAKEKPQVGEVVSAGPGKRNDDGTRAEMEVKVGDKVLYSKYAGTDIK 84
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_BACSK (10 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19 Identity = 47/92 (51.09%), Postives = 66/92 (71.74%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 472 +KPLGDR++++ EEKT GI LP +A+ KPQ G+VVAVG G+ T K+ + VK G +I+SKYAGTE+++ G +LILRE DV+ I+ Sbjct: 2 LKPLGDRIIIEQIQSEEKTASGIVLPDSAKEKPQEGKVVAVGTGRVTDNGEKVALEVKEGDSIIFSKYAGTEVKYEGTEYLILRESDVLAII 93 HSP 2 Score: 73.9442 bits (180), Expect = 9.286e-13 Identity = 32/74 (43.24%), Postives = 52/74 (70.27%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 LKPL DR+ I+ ++EE TA G++L +++KEKP G V+AVG G + + G + L + G+++++SKYAG + K Sbjct: 2 LKPLGDRIIIEQIQSEEKTASGIVLPDSAKEKPQEGKVVAVGTGRVTDNGEKVALEVKEGDSIIFSKYAGTEVK 75
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_PROA2 (10 kDa chaperonin OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=groS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 197 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 ++KPL DRV+VK EEKT GG+++P T + KPQ GE+VAVG GK + L++ V G +V+Y KY+GTE+ G ++LI+RE D+ IL+ Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEIVAVGTGKVAENGQVLEMQVNIGQKVLYGKYSGTEVTVEGEDYLIMRESDIFAILD 95 HSP 2 Score: 70.0922 bits (170), Expect = 1.341e-11 Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 2 Query: 491 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 709 +LKPL DRV +K A AEE T GGL + + KEKP G ++AVG G + E G + + G V+Y KY+G + Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEIVAVGTGKVAENGQVLEMQVNIGQKVLYGKYSGTE 74
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_LACAC (10 kDa chaperonin OS=Lactobacillus acidophilus GN=groS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 469 ++P+GDRV+VK+K EEKT GGI L S A+ KP GEVVAVGEG T KL + VK G V+Y KY+GT +E+ G +L+L E D++ I Sbjct: 2 LQPIGDRVIVKVKEEEEKTVGGIVLASNAKQKPTEGEVVAVGEGAYTSNGDKLPMVVKKGDVVLYDKYSGTNVEYEGEKYLVLHEKDILAI 92 HSP 2 Score: 72.0182 bits (175), Expect = 3.529e-12 Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 709 L+P+ DRV +KV E EE T GG++L +K+KP+ G V+AVG G G++ P+ + G+ V+Y KY+G + Sbjct: 2 LQPIGDRVIVKVKEEEEKTVGGIVLASNAKQKPTEGEVVAVGEGAYTSNGDKLPMVVKKGDVVLYDKYSGTN 73
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_CLONN (10 kDa chaperonin OS=Clostridium novyi (strain NT) GN=groS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19 Identity = 45/92 (48.91%), Postives = 66/92 (71.74%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 IKPLGDRV++K EEKT GI LP +A+ KPQ E+VAVG G V ++ + VK G +V++SKY+GTE++ +G + ILR++D++ I+E Sbjct: 3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVRMEVKVGDKVLFSKYSGTEVKLDGEEYTILRQNDILAIVE 94
BLAST of CF417768 vs. ExPASy Swiss-Prot
Match: CH10_CLOBO (10 kDa chaperonin OS=Clostridium botulinum GN=groS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19 Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 200 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 475 IKPLGDRV++K EEKT GI LP +A+ KPQ E+VAVG G V ++++ VK G +V++S+YAG E++ +G ++ILR++D++ I+E Sbjct: 3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVNMEVKVGDRVLFSQYAGNEVKIDGEEYIILRQNDILAIVE 94 HSP 2 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 494 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK 715 +KPL DRV IK EAEE T G++L ++KEKP ++AVGPG L +G + + G+ V++S+YAGN+ K Sbjct: 3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGL-VDGKEVNMEVKVGDRVLFSQYAGNEVK 75 The following BLAST results are available for this feature:
BLAST of CF417768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 494
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417768 ID=CF417768; Name=CF417768; organism=Citrus sinensis; type=EST; length=716bpback to top |