CF417789

Overview
NameCF417789
Unique NameCF417789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18
Identity = 50/143 (34.97%), Postives = 81/143 (56.64%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDV-MLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 425
            LLD++    + DFG+A++     T   T  V GT G+++PEY   G+ S K+DV+ +G+++LE+I+G +   L ++  D+ V  L+ +             VDP   +NY  +E+ + I +ALLC Q    DRP MS +V+ML
Sbjct:  458 LLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQM--DESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQML 598          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 49/139 (35.25%), Postives = 77/139 (55.40%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYK-DTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVV 416
            LL+E F+  + DFGL++    + +TH +T V GTIG++ PEY  T   +EK+DV+ +G++LL +IT Q   D     N +   + +WV             DP+L  +Y    V + +++A+ C   S M RP MS+VV
Sbjct:  709 LLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVID----QNREKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVV 843          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 51/143 (35.66%), Postives = 83/143 (58.04%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDY-KDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLDE F+A + DFGL++     +++H +T V GT G++ PEY  T + +EK+DV+ +GI+LLE+IT Q   + A    +++  + + V            VDP+L   Y    V + +++A+ C   SP+ RP MS VV+ L+
Sbjct:  705 LLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQA----NENRHIAERVRTMLTRSDISTIVDPNLIGEYDSGSVRKALKLAMSCVDPSPVARPDMSHVVQELK 843          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 49/143 (34.27%), Postives = 78/143 (54.55%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDY-KDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLD  F+A +GDFGL++      +TH +T V G+ G++ PEY  T   +EK+DVF +G++LLE+IT Q   D  R    +   + +WV            VDP +  +Y  + + + +++A+ C   S   RP MS+V   L+
Sbjct:  723 LLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTR----EKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQ 861          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 51/143 (35.66%), Postives = 77/143 (53.85%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYK-DTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLDE F+A + DFGL++      +TH +TAV GT G++ PEY  T + +EK+DV+ +GI+LLE+IT +      R    +   +  WV            VDP L  +Y    V + +++A+ C   S   RP MS+V   L+
Sbjct:  705 LLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTR----EKPHIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELK 843          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17
Identity = 55/196 (28.06%), Postives = 93/196 (47.45%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML-------EGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGP 569
            LLDE++ A V DFG ++ +    TH TT + GT+G++ PEY  + + +EK+DV+ +G++L ELITG +   + +    + V L +              +D  ++N+    +V  + +VA+ C       RP M EV   L       E   +  R DE ++ E   +EV    +    W +  T    ++  S P
Sbjct:  586 LLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPVIMVQ-NTQEIVALAEHFRVAMKEKRLTDIIDARIRNDCKPEQVMAVAKVAMKCLSSKGKKRPNMREVFTELERICTSPEDSQVHNRIDEEEEEEEEEEEVVTTINRGDSWSISVTAPALSIVASSP 780          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17
Identity = 54/144 (37.50%), Postives = 80/144 (55.56%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKD-THXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXV-DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLD  + A + DFGLA+     D +H +T V GT G+ APEYL+TG  S K+DV+ +G++LLEL++G+RA D  +   + +  L+DW             V DP LQ  Y      ++  +AL C       RP M+E+V+ +E
Sbjct:  210 LLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHN--LVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTME 351          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17
Identity = 47/142 (33.10%), Postives = 80/142 (56.34%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLD +FE  V DFGLA+L+   ++H +T + GT G+I PEY  + +++ K DV+ +G++LLEL+TG+           +   L+ W             +DP L +  ++    +L+Q+A+LC   +P  RP M +V++ L+
Sbjct: 1050 LLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTG-PDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALK 1190          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17
Identity = 53/143 (37.06%), Postives = 78/143 (54.55%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM-LLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 425
            LLD E    + DFGLA+      T   T  V GT G++ PEY++ G+ S K+DV+ +G+++LE+I G++     ++  D  V  L+  V            VDP +  NY + EV + I + LLC Q +P DRP MS + RML
Sbjct:  495 LLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKKNSSFHQI--DGSVSNLVTHVWRLRNNGSLLELVDPAIGENYDKDEVIRCIHIGLLCVQENPDDRPSMSTIFRML 635          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAK-LMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVV 416
            LL+E FEA + DFGL++  +   +TH +T V GT G++ PEY  T   +EK+DV+ +GI+LLE+IT +   D +R    +   + +WV            +DP L  +Y    V + +++A+ C   S   RP MS+VV
Sbjct:  710 LLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSR----EKPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSCLNHSSARRPTMSQVV 844          
The following BLAST results are available for this feature:
BLAST of CF417789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
CRK19_ARATH7.459e-1834.97Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
Y5181_ARATH9.742e-1835.25Probable LRR receptor-like serine/threonine-protei... [more]
Y5169_ARATH9.742e-1835.66Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH9.742e-1834.27Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH9.742e-1835.66Probable LRR receptor-like serine/threonine-protei... [more]
WAKLN_ARATH1.272e-1728.06Wall-associated receptor kinase-like 18 OS=Arabido... [more]
NAK_ARATH1.272e-1737.50Probable serine/threonine-protein kinase NAK OS=Ar... [more]
EXS_ARATH1.272e-1733.10Leucine-rich repeat receptor protein kinase EXS OS... [more]
CRK21_ARATH1.662e-1737.06Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
Y5182_ARATH2.170e-1735.97Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-719 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417789 ID=CF417789; Name=CF417789; organism=Citrus sinensis; type=EST; length=723bp
TTTTGTTGGATGAGGAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCT
AAACTTATGGACTACAAGGATACCCATGNCACTACGGCAGTCCGTGGCAC
CATTGGGCATATAGCTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGA
AAACTGATGTCTTTGGTTATGGGATTATGCTTCTAGAGCTAATCACTGGA
CAGAGAGCCTTTGATCTTGCTCGTCTTGCAAATGATGATGATGTCATGCT
GCTTGATTGGGTGAAAGGACTTCTGAAGGAAAAGAAGTTAGAAATGCTAG
TTGACCCTGATCTCCAGAACAATTATGTGGAAGCTGAGGTGGAGCAACTT
ATCCAGGTTGCGTTGCTCTGCACTCAAGGCTCCCCTATGGACCGGCCCAA
GATGTCGGAAGTTGTTAGAATGCTTGAAGGTGATGGCTTGGCAGAGCGGT
GGGATGAGTGGCAAAAGGTGGAAGTTCTCCGCCAAGAAGTAGAATTAGCC
CCTCATCCTAATTCAGATTGGATAGTTGACTCAACAGAAAATCTTCATGC
CGTTGAGTTATCTGGTCCAAGGTGACCCTGTCACTCCTATTAGCTATAAG
TAAAGAGGAAAATTTACTACTTTTTTTTATTCCTTTTTTTAATCATAATT
TTTCTTCTTTTTTTAATTTAACGATGATATCCTGATTTCTGTAAGCCCTT
CAGCATTGTATTCATTACACTTG
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