CF417789

Overview
NameCF417789
Unique NameCF417789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.077e-16
Identity = 49/142 (34.51%), Postives = 77/142 (54.23%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLDE   A V DFG +KL        TT V+GT+G++ PEY +T   +EK+DV+ +G++L+ELI+GQ+A    R   +    L+ +             +D  + N   + E+ +  +VA+ CT+    +RP+M EV   LE
Sbjct:  240 LLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFER--PETSKHLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRMIEVAAELE 379          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.077e-16
Identity = 46/153 (30.07%), Postives = 82/153 (53.59%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEW 461
            LLDE   A V DFG ++L+        T V+GT+G++ PEY +TG  +EK+DV+ +G++L+EL++GQ+A    R      +  + +             +D  + N   + E+++  ++A+ CT+ +  +RP M EV   LE   + +   +W
Sbjct:  542 LLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSKHI--VSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGMKEVAAELEALRVTKTKHKW 692          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.407e-16
Identity = 51/144 (35.42%), Postives = 79/144 (54.86%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDL--QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LL +E    V DFG+A LM    +H T     ++G+ APE + T K ++K+DV+ +G++LLE++TG+ A       +++ V L  WV             D +L  Q + VE E+ Q++Q+A+ C    P  RP M EVV M+E
Sbjct:  475 LLTQELHVCVSDFGIAPLM----SHHTLIPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTT--GHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQIAMACVSKHPDSRPSMEEVVNMME 612          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.407e-16
Identity = 49/150 (32.67%), Postives = 85/150 (56.67%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDT-----HXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQN--NYVEAE-VEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLDE+  A V DFGL++L+D  +T     H  T  +GT+G++ PEY    + ++K+DV+ +G++LLE++T ++A D  R   ++DV L+ ++            +DP L+   N ++ + ++QL  +A  C      +RP M EV   +E
Sbjct:  497 LLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTR--EEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEVADEIE 644          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.407e-16
Identity = 47/150 (31.33%), Postives = 83/150 (55.33%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR---AFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGL 440
            LLD +    + DFG+A++     T   T  V GT G+++PEY++ G+ S K+DV+ +G+++LE+I+G++    + +  L N+    L+ +V            +DP +  ++   EV + I + LLC Q +P DRP MS + +ML    +
Sbjct:  471 LLDADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNN----LVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQENPADRPTMSTIHQMLTNSSI 616          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.837e-16
Identity = 57/164 (34.76%), Postives = 85/164 (51.83%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTT-----AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDV-MLLDWVXXXXXXXXXXXXVDPDLQNNYVE----------------AEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLD E +  V DFGLAK +  +D    +      V G+ G+IAPEY  T K +EK+DV+ +G++LLELITG+R  D +   N D V   ++              ++ D   NY +                 E+E+++ VALLCT   P++RP M +VV +L+
Sbjct:  824 LLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPNDSSFGENKDIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMKLSTREYEEIEKVLDVALLCTSSFPINRPTMRKVVELLK 987          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.837e-16
Identity = 45/147 (30.61%), Postives = 80/147 (54.42%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGL 440
            LLD +    + DFG+A+      T   T  V GT G++ PEY++ G+ S K+DV+ +G+++LE++ G++     ++ +D    L+  V            +DP ++ +Y   EV + I + +LC Q +P DRP+MS + +ML    +
Sbjct:  471 LLDADMNPKIADFGMARNFRVDQTEDQTGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFFQM-DDSGGNLVTHVWRLWNNDSPLDLIDPAIKESYDNDEVIRCIHIGILCVQETPADRPEMSTIFQMLTNSSI 616          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.837e-16
Identity = 53/145 (36.55%), Postives = 82/145 (56.55%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDL--QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLDE  EA V DFG+A+LM   DTH + + + GT G++ PEY  + + S K DV+ YG++LLEL+TG+R  D     +++   L+ WV             DP+L  ++  +E E+ Q ++VA+ C       RP M +V+ M +
Sbjct: 1016 LLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSPDFGDNN---LVGWV-KQHAKLRISDVFDPELMKEDPALEIELLQHLKVAVACLDDRAWRRPTMVQVMAMFK 1156          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 52/145 (35.86%), Postives = 86/145 (59.31%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTA-VRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL-DWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLDE +EA + D+GL K +   D+   T      +G+IAPE      ++SEK DV+ YG++LLEL+TG++  +     +++ V++L D+V             D  L+  + E E+ Q++++ LLCT  +P+ RP M+EVV++LE
Sbjct:  734 LLDERYEAKLSDYGLEKFLPVMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESP---SENQVLILRDYVRDLLETGSASDCFDRRLRE-FEENELIQVMKLGLLCTSENPLKRPSMAEVVQVLE 874          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 52/145 (35.86%), Postives = 79/145 (54.48%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDP--DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLD E    V DFG+A+L D  +T   T+ V GT G++APEY + G+ S K+DV+ +G+MLLE+I+G+    L +   +++  L  +V            +DP     NN    EV +LI + LLC Q     RP ++ ++  LE
Sbjct:  477 LLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKRWIEGRFAEIIDPLAAPSNNISINEVMKLIHIGLLCVQEDISKRPSINSILFWLE 621          
The following BLAST results are available for this feature:
BLAST of CF417789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
WAKLS_ARATH1.077e-1634.51Putative wall-associated receptor kinase-like 16 O... [more]
WAK4_ARATH1.077e-1630.07Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
Y3868_ARATH1.407e-1635.42Probable inactive receptor kinase At3g08680 OS=Ara... [more]
WAKLQ_ARATH1.407e-1632.67Wall-associated receptor kinase-like 20 OS=Arabido... [more]
CRK18_ARATH1.407e-1631.33Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
HSL2_ARATH1.837e-1634.76LRR receptor-like serine/threonine-protein kinase ... [more]
CRK31_ARATH1.837e-1630.61Putative cysteine-rich receptor-like protein kinas... [more]
BRI1_ARATH1.837e-1636.55Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y1124_ARATH2.399e-1635.86Probable LRR receptor-like serine/threonine-protei... [more]
CRK37_ARATH2.399e-1635.86Cysteine-rich receptor-like protein kinase 37 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-719 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417789 ID=CF417789; Name=CF417789; organism=Citrus sinensis; type=EST; length=723bp
TTTTGTTGGATGAGGAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCT
AAACTTATGGACTACAAGGATACCCATGNCACTACGGCAGTCCGTGGCAC
CATTGGGCATATAGCTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGA
AAACTGATGTCTTTGGTTATGGGATTATGCTTCTAGAGCTAATCACTGGA
CAGAGAGCCTTTGATCTTGCTCGTCTTGCAAATGATGATGATGTCATGCT
GCTTGATTGGGTGAAAGGACTTCTGAAGGAAAAGAAGTTAGAAATGCTAG
TTGACCCTGATCTCCAGAACAATTATGTGGAAGCTGAGGTGGAGCAACTT
ATCCAGGTTGCGTTGCTCTGCACTCAAGGCTCCCCTATGGACCGGCCCAA
GATGTCGGAAGTTGTTAGAATGCTTGAAGGTGATGGCTTGGCAGAGCGGT
GGGATGAGTGGCAAAAGGTGGAAGTTCTCCGCCAAGAAGTAGAATTAGCC
CCTCATCCTAATTCAGATTGGATAGTTGACTCAACAGAAAATCTTCATGC
CGTTGAGTTATCTGGTCCAAGGTGACCCTGTCACTCCTATTAGCTATAAG
TAAAGAGGAAAATTTACTACTTTTTTTTATTCCTTTTTTTAATCATAATT
TTTCTTCTTTTTTTAATTTAACGATGATATCCTGATTTCTGTAAGCCCTT
CAGCATTGTATTCATTACACTTG
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