CF417831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417831 vs. ExPASy Swiss-Prot
Match: CNG_ICTPU (Cyclic nucleotide-gated cation channel OS=Ictalurus punctatus PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 45/195 (23.08%), Postives = 98/195 (50.26%), Query Frame = 3 Query: 9 FWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRQLPQGFRQRVRNYERQRWAAMRGVDECEMISNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQILHNNIKSCCMLGPGNFSGD 593 +W +TL+T G + + E VF + G+L+ ++GN+ + + + Q ++ I+ +M R++ + RV + W + VDE E++ NLP+ LR +I ++ LD +++V +FQ + +L + +++ +++ G+ I ++GD + M + G L + + + + +L G G+ Sbjct: 322 YWSTLTLTTIGEMPPPVKDEEYVFVVFDFLVGVLIFATIVGNVGSMIANMNATRAEFQTRIDAIKHYMHFRKVNRTLETRVIKWFDYLWTNKKTVDEQEVLKNLPDKLRAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPQVYSPGDYICRKGDIGKEMYIIKEGQL--AVVADDGVTQFALLTAGGCFGE 514
BLAST of CF417831 vs. ExPASy Swiss-Prot
Match: CNGA1_HUMAN (cGMP-gated cation channel alpha-1 OS=Homo sapiens GN=CNGA1 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 45/196 (22.96%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 6 IFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRQLPQGFRQRVRNYERQRWAAMRGVDECEMISNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQILHNNIKSCCMLGPGNFSGD 593 ++W +TL+T G E VF ++ G+L+ ++GNI + + + Q ++ I+ +M R + + +RV + W + VDE E++ LP+ LR +I ++ LD +++V +F + +L + +++ +++ G+ I K+GD + M + G L + + + + +L G++ G+ Sbjct: 353 LYWSTLTLTTIGETPPPVRDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKL--AVVADDGVTQFVVLSDGSYFGE 546
BLAST of CF417831 vs. ExPASy Swiss-Prot
Match: CNGA2_HUMAN (Cyclic nucleotide-gated olfactory channel OS=Homo sapiens GN=CNGA2 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.933e-14 Identity = 44/196 (22.45%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 6 IFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRQLPQGFRQRVRNYERQRWAAMRGVDECEMISNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQILHNNIKSCCMLGPGNFSGD 593 ++W +TL+T G + E +F I G+L+ ++GN+ + + + Q K+ ++ +M+ R++ +G +V + W + VDE E++ NLP LR +I ++ L +++V +F + +L + +++ +F+ G+ I ++GD + M + G L + + + + +L G+ G+ Sbjct: 328 LYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGNVGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKGMEAKVIRWFDYLWTNKKTVDEREILKNLPAKLRAEIAINVHLSTLKKVRIFHDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKL--AVVADDGVTQYALLSAGSCFGE 521
BLAST of CF417831 vs. ExPASy Swiss-Prot
Match: CNGA2_BOVIN (Cyclic nucleotide-gated olfactory channel OS=Bos taurus GN=CNGA2 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.525e-14 Identity = 44/196 (22.45%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 6 IFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRQLPQGFRQRVRNYERQRWAAMRGVDECEMISNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQILHNNIKSCCMLGPGNFSGD 593 ++W +TL+T G + E +F I G+L+ ++GN+ + + + Q K+ ++ +M+ R++ + +V + W + VDE E++ NLP LR +I ++ L +++V +FQ + +L + +++ +F+ G+ I ++GD + M + G L + + + + +L G+ G+ Sbjct: 328 LYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGNVGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKEMEAKVIRWFDYLWTNKKSVDEREVLKNLPAKLRAEIAINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKL--AVVADDGVTQYALLSAGSCFGE 521
BLAST of CF417831 vs. ExPASy Swiss-Prot
Match: CNGA2_RAT (Cyclic nucleotide-gated olfactory channel OS=Rattus norvegicus GN=Cnga2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.297e-14 Identity = 44/196 (22.45%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 6 IFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRQLPQGFRQRVRNYERQRWAAMRGVDECEMISNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQILHNNIKSCCMLGPGNFSGD 593 ++W +TL+T G + E +F I G+L+ ++GN+ + + + Q K+ ++ +M+ R++ + +V + W + VDE E++ NLP LR +I ++ L +++V +FQ + +L + +++ +F+ G+ I ++GD + M + G L + + + + +L G+ G+ Sbjct: 330 LYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGNVGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKDMEAKVIKWFDYLWTNKKTVDEREVLKNLPAKLRAEIAINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKL--AVVADDGVTQYALLSAGSCFGE 523
BLAST of CF417831 vs. ExPASy Swiss-Prot
Match: CNGA2_MOUSE (Cyclic nucleotide-gated olfactory channel OS=Mus musculus GN=Cnga2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.297e-14 Identity = 44/196 (22.45%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 6 IFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRQLPQGFRQRVRNYERQRWAAMRGVDECEMISNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQILHNNIKSCCMLGPGNFSGD 593 ++W +TL+T G + E +F I G+L+ ++GN+ + + + Q K+ ++ +M+ R++ + +V + W + VDE E++ NLP LR +I ++ L +++V +FQ + +L + +++ +F+ G+ I ++GD + M + G L + + + + +L G+ G+ Sbjct: 330 LYWSTLTLTTIGETPPPVKDEEYLFFIFDFLIGVLIFATIVGNVGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKDMEAKVIKWFDYLWTNKKTVDEREVLKNLPAKLRAEIAINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKL--AVVADDGVTQYALLSAGSCFGE 523
BLAST of CF417831 vs. ExPASy Swiss-Prot
Match: CNGA1_RAT (cGMP-gated cation channel alpha-1 OS=Rattus norvegicus GN=Cnga1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.297e-14 Identity = 46/196 (23.47%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 6 IFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRQLPQGFRQRVRNYERQRWAAMRGVDECEMISNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQILHNNIKSCCMLGPGNFSGD 593 ++W +TL+T G E VF ++ G+L+ ++GNI + + + Q ++ I+ +M R + + +RV + W + VDE E++ LP+ LR +I ++ LD +++V +F + +L + +++ +++ G+ I K+GD + M + G L + + + I +L G++ G+ Sbjct: 344 LYWSTLTLTTIGETPPPVLDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQSRVDAIKQYMNFRNVSKDMEKRVIKWFDYLWTNKKTVDEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKL--AVVADDGITQFVVLSDGSYFGE 537
BLAST of CF417831 vs. ExPASy Swiss-Prot
Match: CNGA2_RABIT (Cyclic nucleotide-gated olfactory channel OS=Oryctolagus cuniculus GN=CNGA2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14 Identity = 44/196 (22.45%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 6 IFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRQLPQGFRQRVRNYERQRWAAMRGVDECEMISNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQILHNNIKSCCMLGPGNFSGD 593 ++W +TL+T G + E +F I G+L+ ++GN+ + + + Q K+ ++ +M+ R++ + +V + W + VDE E++ NLP LR +I ++ L +++V +FQ + +L + +++ +F+ G+ I ++GD + M + G L + + + + +L G+ G+ Sbjct: 328 LYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGNVGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKEMEAKVIKWFDYLWTNKKTVDEREVLKNLPAKLRAEIAINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKL--AVVADDGVTQYALLSAGSCFGE 521
BLAST of CF417831 vs. ExPASy Swiss-Prot
Match: CNGA1_MOUSE (cGMP-gated cation channel alpha-1 OS=Mus musculus GN=Cnga1 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14 Identity = 45/196 (22.96%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 6 IFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRQLPQGFRQRVRNYERQRWAAMRGVDECEMISNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQILHNNIKSCCMLGPGNFSGD 593 ++W +TL+T G E +F ++ G+L+ ++GNI + + + Q ++ I+ +M R + + +RV + W + VDE E++ LP+ LR +I ++ LD +++V +F + +L + +++ +++ G+ I K+GD + M + G L + + + I +L G++ G+ Sbjct: 345 LYWSTLTLTTIGETPPPVLDSEYIFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQSRVDAIKQYMNFRNVSKDMEKRVIKWFDYLWTNKKTVDEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKL--AVVADDGITQFVVLSDGSYFGE 538
BLAST of CF417831 vs. ExPASy Swiss-Prot
Match: KCNH1_RAT (Potassium voltage-gated channel subfamily H member 1 OS=Rattus norvegicus GN=Kcnh1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.625e-14 Identity = 47/191 (24.61%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 21 MTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRQLPQGFRQRVRNYERQRWAAMRGVDECEMISNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQILHNNIKSCCMLGPGNFSGD 593 +T FGN+ +T+ +E +F + ++ G LL + GN+ + + ++ +++ Q+P+G +RV +Y W+ RG+D +++ P+ +R DI HL + ++ P F+ D L + +++ G++I G+ V + FVV G L+ Q + + +LG G+ GD Sbjct: 434 LTSVGFGNIAPSTD-IEKIFAVAIMMIGSLLYATIFGNVTTIFQQMYANTNRYHEMLNSVRDFLKLYQVPKGLSERVMDYIVSTWSMSRGIDTEKVLQICPKDMRADICVHLNRKVFKEHPAFRLASDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQ----DDEVVAILGKGDVFGD 619 The following BLAST results are available for this feature:
BLAST of CF417831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417831 ID=CF417831; Name=CF417831; organism=Citrus sinensis; type=EST; length=667bpback to top |