CF417832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417832 vs. ExPASy Swiss-Prot
Match: H42_ASHGO (Histone H4.2 OS=Ashbya gossypii GN=HHF2 PE=3 SV=3) HSP 1 Score: 134.42 bits (337), Expect = 2.172e-31 Identity = 67/78 (85.90%), Postives = 72/78 (92.31%), Query Frame = 2 Query: 2 NIQGITKPAIRRLAXRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 235 NIQGITKPAI RLA RGGVKRISGLIYE+ R VLK LE+VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG Sbjct: 26 NIQGITKPAILRLARRGGVKRISGLIYEDVRAVLKSVLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103
BLAST of CF417832 vs. ExPASy Swiss-Prot
Match: H4_EUPCR (Histone H4 OS=Euplotes crassus PE=1 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 6.319e-31 Identity = 65/77 (84.42%), Postives = 72/77 (93.51%), Query Frame = 2 Query: 5 IQGITKPAIRRLAXRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 235 I G+TKPAIRRLA RGGVKRIS L+YEETR VLK FLE+VIRD+VTYTEHA+RKTVTA+DVVYALKRQG+TLYGFGG Sbjct: 31 ILGVTKPAIRRLARRGGVKRISSLVYEETRAVLKGFLESVIRDSVTYTEHAKRKTVTALDVVYALKRQGKTLYGFGG 107
BLAST of CF417832 vs. ExPASy Swiss-Prot
Match: H4_ENTHI (Histone H4 OS=Entamoeba histolytica PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.467e-29 Identity = 61/75 (81.33%), Postives = 70/75 (93.33%), Query Frame = 2 Query: 5 IQGITKPAIRRLAXRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 229 ++GITKPAIRRLA RGGVKRI+G +Y+ETR VLK FLE VIRD+VTYTEHA+R+TVTAMDVVYALKRQGRTLYG+ Sbjct: 43 LKGITKPAIRRLARRGGVKRINGAVYDETRNVLKQFLEQVIRDSVTYTEHAKRRTVTAMDVVYALKRQGRTLYGY 117
BLAST of CF417832 vs. ExPASy Swiss-Prot
Match: H41_BLEJA (Histone H4-1 (Fragment) OS=Blepharisma japonicum PE=1 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 2.247e-28 Identity = 62/71 (87.32%), Postives = 68/71 (95.77%), Query Frame = 2 Query: 2 NIQGITKPAIRRLAXRGGVKR-ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQG 211 NIQGITKPAIRRLA RGGVKR +SGL+Y+ETR VLK+FLENV+RDAVTYTEHARRKTVTA+DVVYALKRQG Sbjct: 28 NIQGITKPAIRRLARRGGVKRTLSGLVYDETRNVLKVFLENVVRDAVTYTEHARRKTVTALDVVYALKRQG 98
BLAST of CF417832 vs. ExPASy Swiss-Prot
Match: H4_DICDI (Histone H4 OS=Dictyostelium discoideum GN=H4a PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.833e-28 Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 2 Query: 2 NIQGITKPAIRRLAXRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 229 +I GITKPAIRRLA RGGVKRIS IYEETR VL+ FL NVIRD+V YTEHA R+TVTAMDVVYALKRQGRTLYGF Sbjct: 31 HINGITKPAIRRLARRGGVKRISFPIYEETRNVLRTFLTNVIRDSVAYTEHAGRRTVTAMDVVYALKRQGRTLYGF 106
BLAST of CF417832 vs. ExPASy Swiss-Prot
Match: H42_BLEJA (Histone H4 (Fragment) OS=Blepharisma japonicum GN=H4 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.588e-26 Identity = 58/71 (81.69%), Postives = 67/71 (94.37%), Query Frame = 2 Query: 2 NIQGITKPAIRRLAXRGGVKR-ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQG 211 N QGITKPAIRRLA RGGVKR +SGL+Y+ETR VLK+FLE+V+RDAVTYTEHA+R+TVTA+DVVYALKRQG Sbjct: 19 NNQGITKPAIRRLARRGGVKRTLSGLVYDETRNVLKVFLESVVRDAVTYTEHAKRETVTALDVVYALKRQG 89
BLAST of CF417832 vs. ExPASy Swiss-Prot
Match: H4G_HUMAN (Histone H4-like protein type G OS=Homo sapiens GN=HIST1H4G PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.358e-24 Identity = 59/73 (80.82%), Postives = 61/73 (83.56%), Query Frame = 2 Query: 2 NIQGITKPAIRRLAXRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 220 NIQGITK IRRLA GGVKRI GLIYEETR V K+FLENVI AVT TEHA+RKTVTAM VVY LKRQGRTL Sbjct: 26 NIQGITKCTIRRLARHGGVKRILGLIYEETRRVFKVFLENVIWYAVTNTEHAKRKTVTAMAVVYVLKRQGRTL 98 The following BLAST results are available for this feature:
BLAST of CF417832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417832 ID=CF417832; Name=CF417832; organism=Citrus sinensis; type=EST; length=455bpback to top |