CF417835

Overview
NameCF417835
Unique NameCF417835
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: YAK1_ENCCU (Probable dual specificity protein kinase YAK1 homolog OS=Encephalitozoon cuniculi GN=YAK1 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.025e-35
Identity = 81/196 (41.33%), Postives = 115/196 (58.67%), Query Frame = 2
Query:   20 GMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIG 607
            G +V +K++KN   +++  ++E+++L  +  ++  D++  ++  D F Y++HL IV ELL  NLY F K  R  G       P L++I  Q LE +  L  LG+IHCDLKPENIL+  Y   ++K+ID GS+         YVQSR YRAPEVILG+ Y    DIWSLGCI  EL  G+ LF        + R+ G
Sbjct:   62 GEEVAIKVVKNQPKYYNYEMNEVRILHKLLYNNLNDRFVTIK--DVFMYKQHLCIVEELLGRNLYTFLKMTRFKG----LDHPTLRTILHQILEGMVQLSLLGIIHCDLKPENILIADYDTFKIKIIDFGSAVTSPQGSHFYVQSRYYRAPEVILGIPYGSSCDIWSLGCIGYELYVGHPLFPGKDNMDQIGRIHG 251          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: LKH1_SCHPO (Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe GN=lkh1 PE=1 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 2.561e-34
Identity = 76/205 (37.07%), Postives = 123/205 (60.00%), Query Frame = 2
Query:    5 HDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV------------KSYSR-----CEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ 568
            +D  TG    +K+ +    + + SL E+++L+ +   DP ++   ++L DYF YR+H+ IV +L   ++++F K N      + F +  +Q ++ Q  +++ FLH LGL+H DLKPEN+L+            ++YS+     CE+++ID GS+ FE ++  S V +R YRAPE+ILGL +    D+WS+GCIL EL TG  LFQ
Sbjct:  380 YDQSTGRHCAIKVTRAIPKYREASLIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNY----IPFPLKHIQMLSQQLFKSVAFLHSLGLVHTDLKPENVLLVSNASRTIRLPYRNYSQKVLNSCEIRLIDFGSATFEDEYHSSVVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELFTGQALFQ 580          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: PRP4B_RAT (Serine/threonine-protein kinase PRP4 homolog OS=Rattus norvegicus GN=Prpf4b PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 8.237e-33
Identity = 78/181 (43.09%), Postives = 114/181 (62.98%), Query Frame = 2
Query:   26 DVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH-LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            +V VKII+NN+      L E++ LK +N  DP DK+H LRL+ +FY+++HL +V E L  NL E  K   + G +V   +  ++S + Q   AL+ L    ++H D+KP+NILV   S+  +K+ D GS+    D+ +  Y+ SR YRAPE+I+G SYD  ID+WS+GC L EL TG +LF
Sbjct:  713 EVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLK---KYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNE-SKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILF 889          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: PRP4B_PONAB (Serine/threonine-protein kinase PRP4 homolog OS=Pongo abelii GN=PRPF4B PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 8.237e-33
Identity = 78/181 (43.09%), Postives = 114/181 (62.98%), Query Frame = 2
Query:   26 DVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH-LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            +V VKII+NN+      L E++ LK +N  DP DK+H LRL+ +FY+++HL +V E L  NL E  K   + G +V   +  ++S + Q   AL+ L    ++H D+KP+NILV   S+  +K+ D GS+    D+ +  Y+ SR YRAPE+I+G SYD  ID+WS+GC L EL TG +LF
Sbjct:  713 EVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLK---KYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNE-SKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILF 889          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: PRP4B_MOUSE (Serine/threonine-protein kinase PRP4 homolog OS=Mus musculus GN=Prpf4b PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 8.237e-33
Identity = 78/181 (43.09%), Postives = 114/181 (62.98%), Query Frame = 2
Query:   26 DVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH-LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            +V VKII+NN+      L E++ LK +N  DP DK+H LRL+ +FY+++HL +V E L  NL E  K   + G +V   +  ++S + Q   AL+ L    ++H D+KP+NILV   S+  +K+ D GS+    D+ +  Y+ SR YRAPE+I+G SYD  ID+WS+GC L EL TG +LF
Sbjct:  713 EVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLK---KYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNE-SKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILF 889          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: PRP4B_HUMAN (Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 8.237e-33
Identity = 78/181 (43.09%), Postives = 114/181 (62.98%), Query Frame = 2
Query:   26 DVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH-LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            +V VKII+NN+      L E++ LK +N  DP DK+H LRL+ +FY+++HL +V E L  NL E  K   + G +V   +  ++S + Q   AL+ L    ++H D+KP+NILV   S+  +K+ D GS+    D+ +  Y+ SR YRAPE+I+G SYD  ID+WS+GC L EL TG +LF
Sbjct:  713 EVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLK---KYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNE-SKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILF 889          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: PRP4B_BOVIN (Serine/threonine-protein kinase PRP4 homolog OS=Bos taurus GN=PRPF4B PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 8.237e-33
Identity = 78/181 (43.09%), Postives = 114/181 (62.98%), Query Frame = 2
Query:   26 DVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH-LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            +V VKII+NN+      L E++ LK +N  DP DK+H LRL+ +FY+++HL +V E L  NL E  K   + G +V   +  ++S + Q   AL+ L    ++H D+KP+NILV   S+  +K+ D GS+    D+ +  Y+ SR YRAPE+I+G SYD  ID+WS+GC L EL TG +LF
Sbjct:  714 EVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLK---KYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNE-SKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILF 890          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK2_MOUSE (Homeodomain-interacting protein kinase 2 OS=Mus musculus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.650e-31
Identity = 79/186 (42.47%), Postives = 114/186 (61.29%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS 577
            V +KI+KN+  +  Q   E+ +L  ++  +  D Y+ +R Y+ F ++ H  +V E+L+ NLY+F K N+ S   + +  P LQ +      AL  L  LGLIH DLKPENI++   SR    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+WSLGC++AEL  G  L+   S
Sbjct:  225 VAIKILKNHPSYARQGQIEVSILARLST-ESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQQVAT----ALMKLKSLGLIHADLKPENIMLVDPSRQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGAS 405          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK2_MESAU (Homeodomain-interacting protein kinase 2 OS=Mesocricetus auratus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.650e-31
Identity = 79/186 (42.47%), Postives = 114/186 (61.29%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS 577
            V +KI+KN+  +  Q   E+ +L  ++  +  D Y+ +R Y+ F ++ H  +V E+L+ NLY+F K N+ S   + +  P LQ +      AL  L  LGLIH DLKPENI++   SR    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+WSLGC++AEL  G  L+   S
Sbjct:  225 VAIKILKNHPSYARQGQIEVSILARLST-ESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQQVAT----ALMKLKSLGLIHADLKPENIMLVDPSRQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGAS 405          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK2_HUMAN (Homeodomain-interacting protein kinase 2 OS=Homo sapiens GN=HIPK2 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.650e-31
Identity = 79/186 (42.47%), Postives = 114/186 (61.29%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS 577
            V +KI+KN+  +  Q   E+ +L  ++  +  D Y+ +R Y+ F ++ H  +V E+L+ NLY+F K N+ S   + +  P LQ +      AL  L  LGLIH DLKPENI++   SR    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+WSLGC++AEL  G  L+   S
Sbjct:  225 VAIKILKNHPSYARQGQIEVSILARLST-ESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQQVAT----ALMKLKSLGLIHADLKPENIMLVDPSRQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGAS 405          
The following BLAST results are available for this feature:
BLAST of CF417835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
YAK1_ENCCU3.025e-3541.33Probable dual specificity protein kinase YAK1 homo... [more]
LKH1_SCHPO2.561e-3437.07Dual specificity protein kinase lkh1 OS=Schizosacc... [more]
PRP4B_RAT8.237e-3343.09Serine/threonine-protein kinase PRP4 homolog OS=Ra... [more]
PRP4B_PONAB8.237e-3343.09Serine/threonine-protein kinase PRP4 homolog OS=Po... [more]
PRP4B_MOUSE8.237e-3343.09Serine/threonine-protein kinase PRP4 homolog OS=Mu... [more]
PRP4B_HUMAN8.237e-3343.09Serine/threonine-protein kinase PRP4 homolog OS=Ho... [more]
PRP4B_BOVIN8.237e-3343.09Serine/threonine-protein kinase PRP4 homolog OS=Bo... [more]
HIPK2_MOUSE2.650e-3142.47Homeodomain-interacting protein kinase 2 OS=Mus mu... [more]
HIPK2_MESAU2.650e-3142.47Homeodomain-interacting protein kinase 2 OS=Mesocr... [more]
HIPK2_HUMAN2.650e-3142.47Homeodomain-interacting protein kinase 2 OS=Homo s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-765 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417835 ID=CF417835; Name=CF417835; organism=Citrus sinensis; type=EST; length=626bp
AGCACATGACCTTCACACAGGCATGGATGTTTGTGTGAAAATTATTAAGA
ACAACAAAGATTTTTTTGATCAAAGCCTCGATGAGATAAAGCTTCTCAAG
TATGTCAACAAGCATGATCCCGGAGACAAATACCATCTTCTGCGTTTGTA
TGATTATTTCTACTATCGAGAGCATCTGCTAATAGTATGTGAGCTCCTGA
AGGCGAACTTGTATGAGTTCCATAAATTTAATAGAGAATCCGGAGGAGAG
GTCTATTTTACAATGCCGAGGTTGCAGTCTATTACTATCCAGTGTCTTGA
AGCTCTTCAATTCTTGCACGGCCTTGGACTTATTCATTGTGATTTGAAGC
CTGAAAACATCTTAGTGAAAAGTTATAGTAGATGTGAGGTGAAGGTCATT
GATCTTGGGAGTAGCTGTTTTGAGACAGATCATCTCTGCTCCTATGTTCA
ATCCAGGTCCTATCGTGCACCAGAAGTTATCCTTGGACTGTCATACGATA
AGAAGATAGACATATGGTCACTTGGCTGCATTTTGGCAGAACTCTGTACT
GGAAATGTTCTCTTCCAAAATGATTCTCCAGCAACATTACTTGCACGGGT
GATTGGGAATCATTGGTCCCATTGAA
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