CF417835

Overview
NameCF417835
Unique NameCF417835
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK1_RAT (Homeodomain-interacting protein kinase 1 OS=Rattus norvegicus GN=Hipk1 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.903e-31
Identity = 78/186 (41.94%), Postives = 114/186 (61.29%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS 577
            V +KI+KN+  +  Q   E+ +L  ++  +  D+Y+ +R Y+ F ++ H  +V E+L+ NLY+F K N+ S   + +  P LQ +      AL  L  LGLIH DLKPENI++    R    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+WSLGC++AEL  G  L+   S
Sbjct:  216 VAIKILKNHPSYARQGQIEVSILSRLSSEN-ADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVAT----ALMKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGAS 396          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK1_MOUSE (Homeodomain-interacting protein kinase 1 OS=Mus musculus GN=Hipk1 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 5.903e-31
Identity = 78/186 (41.94%), Postives = 114/186 (61.29%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS 577
            V +KI+KN+  +  Q   E+ +L  ++  +  D+Y+ +R Y+ F ++ H  +V E+L+ NLY+F K N+ S   + +  P LQ +      AL  L  LGLIH DLKPENI++    R    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+WSLGC++AEL  G  L+   S
Sbjct:  216 VAIKILKNHPSYARQGQIEVSILSRLSSEN-ADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVAT----ALMKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGAS 396          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK1_HUMAN (Homeodomain-interacting protein kinase 1 OS=Homo sapiens GN=HIPK1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.903e-31
Identity = 78/186 (41.94%), Postives = 114/186 (61.29%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS 577
            V +KI+KN+  +  Q   E+ +L  ++  +  D+Y+ +R Y+ F ++ H  +V E+L+ NLY+F K N+ S   + +  P LQ +      AL  L  LGLIH DLKPENI++    R    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+WSLGC++AEL  G  L+   S
Sbjct:  216 VAIKILKNHPSYARQGQIEVSILSRLSSEN-ADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVAT----ALMKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGAS 396          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: AFC2_ARATH (Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.903e-31
Identity = 82/219 (37.44%), Postives = 120/219 (54.79%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKS-------------------YSRCE----VKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ---NDSPATLLARVIG 607
            V VKI++  K + + ++ EI++L+ + KHD G     +++ ++F YR H+ IV E L ++LY+F + N        F +  ++ I  Q LE + F+H L +IH DLKPENIL+ S                   Y R      +KVID GS+ +E       V +R YRAPEVILGL +    D+WS+GCI+ ELCTG  LFQ   N     ++ RV+G
Sbjct:  124 VAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS----FPIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVKIPEYKGSRLQRDVCYKRVPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLGWSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLG 337          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK3_RAT (Homeodomain-interacting protein kinase 3 OS=Rattus norvegicus GN=Hipk3 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.007e-30
Identity = 78/182 (42.86%), Postives = 113/182 (62.09%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            V +KI+KN+  +  Q   E+ +L  ++  +  D+Y+ +R Y+ F +R H  +V E+L+ NLY+F K N+ S   +    P LQ +      AL+ L  LGLIH DLKPENI++    R    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+WSLGC++AEL  G  L+
Sbjct:  223 VAIKILKNHPSYARQGQIEVSILARLSTEN-ADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPVLQQVAT----ALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKTVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLY 399          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK3_MOUSE (Homeodomain-interacting protein kinase 3 OS=Mus musculus GN=Hipk3 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.007e-30
Identity = 78/182 (42.86%), Postives = 113/182 (62.09%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            V +KI+KN+  +  Q   E+ +L  ++  +  D+Y+ +R Y+ F +R H  +V E+L+ NLY+F K N+ S   +    P LQ +      AL+ L  LGLIH DLKPENI++    R    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+WSLGC++AEL  G  L+
Sbjct:  223 VAIKILKNHPSYARQGQIEVSILARLSTEN-ADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPVLQQVAT----ALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKTVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLY 399          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK3_HUMAN (Homeodomain-interacting protein kinase 3 OS=Homo sapiens GN=HIPK3 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.007e-30
Identity = 78/182 (42.86%), Postives = 113/182 (62.09%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            V +KI+KN+  +  Q   E+ +L  ++  +  D+Y+ +R Y+ F +R H  +V E+L+ NLY+F K N+ S   +    P LQ +      AL+ L  LGLIH DLKPENI++    R    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+WSLGC++AEL  G  L+
Sbjct:  223 VAIKILKNHPSYARQGQIEVSILARLSTEN-ADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPILQQVAT----ALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKTVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLY 399          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK4_RAT (Homeodomain-interacting protein kinase 4 OS=Rattus norvegicus GN=Hipk4 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.997e-30
Identity = 78/194 (40.21%), Postives = 119/194 (61.34%), Query Frame = 2
Query:   17 TGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMP--RLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRC--EVKVIDLGSSCFETDHLC---SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS 577
            TG  V +KI+KN+        +E+KLL+ V   DP D+ H++R  ++F+      +V ELL+ NL+EF K N       +  +P   ++++T+Q L AL  L  L +IH DLKPENI++   +RC   VKVID GS+   ++       Y+QSR YRAPE++LGL + +K+D+WSLGC++AEL  G  L+  ++
Sbjct:   33 TGEMVAIKILKNDAYRSRIIKNELKLLRCVRGLDP-DEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENN------FAPLPARHIRTVTLQVLRALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLYPGNN 219          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK4_MOUSE (Homeodomain-interacting protein kinase 4 OS=Mus musculus GN=Hipk4 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 4.997e-30
Identity = 78/194 (40.21%), Postives = 119/194 (61.34%), Query Frame = 2
Query:   17 TGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMP--RLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRC--EVKVIDLGSSCFETDHLC---SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS 577
            TG  V +KI+KN+        +E+KLL+ V   DP D+ H++R  ++F+      +V ELL+ NL+EF K N       +  +P   ++++T+Q L AL  L  L +IH DLKPENI++   +RC   VKVID GS+   ++       Y+QSR YRAPE++LGL + +K+D+WSLGC++AEL  G  L+  ++
Sbjct:   33 TGEMVAIKILKNDAYRSRIIKNELKLLRCVRGLDP-DEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENN------FAPLPARHIRTVTLQVLRALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLYPGNN 219          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: AFC3_ARATH (Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.239e-29
Identity = 82/225 (36.44%), Postives = 125/225 (55.56%), Query Frame = 2
Query:    8 DLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKS-----------------YSRC-----EVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ---NDSPATLLARVIG 607
            D  T   V +KII++ K + D ++ EI +L+ + K D G +   +++ ++F YR H+ IV E L  +L++F K N+ S     F +  ++    Q LE++ ++H L L+H DLKPENIL+ S                 + RC      +K+ID GS+  +     S VQ+R YR+PEVILGL +  + D+WS+GCIL ELCTG  LFQ   N     ++ R +G
Sbjct:   90 DRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVKSDKG-RTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSA----FPLALVRDFGCQLLESVAYMHELQLVHTDLKPENILLVSSENVKLPDNKRSAANETHFRCLPKSSAIKLIDFGSTVCDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAMMERALG 309          
The following BLAST results are available for this feature:
BLAST of CF417835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIPK1_RAT5.903e-3141.94Homeodomain-interacting protein kinase 1 OS=Rattus... [more]
HIPK1_MOUSE5.903e-3141.94Homeodomain-interacting protein kinase 1 OS=Mus mu... [more]
HIPK1_HUMAN5.903e-3141.94Homeodomain-interacting protein kinase 1 OS=Homo s... [more]
AFC2_ARATH5.903e-3137.44Serine/threonine-protein kinase AFC2 OS=Arabidopsi... [more]
HIPK3_RAT1.007e-3042.86Homeodomain-interacting protein kinase 3 OS=Rattus... [more]
HIPK3_MOUSE1.007e-3042.86Homeodomain-interacting protein kinase 3 OS=Mus mu... [more]
HIPK3_HUMAN1.007e-3042.86Homeodomain-interacting protein kinase 3 OS=Homo s... [more]
HIPK4_RAT4.997e-3040.21Homeodomain-interacting protein kinase 4 OS=Rattus... [more]
HIPK4_MOUSE4.997e-3040.21Homeodomain-interacting protein kinase 4 OS=Mus mu... [more]
AFC3_ARATH3.239e-2936.44Serine/threonine-protein kinase AFC3 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-765 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417835 ID=CF417835; Name=CF417835; organism=Citrus sinensis; type=EST; length=626bp
AGCACATGACCTTCACACAGGCATGGATGTTTGTGTGAAAATTATTAAGA
ACAACAAAGATTTTTTTGATCAAAGCCTCGATGAGATAAAGCTTCTCAAG
TATGTCAACAAGCATGATCCCGGAGACAAATACCATCTTCTGCGTTTGTA
TGATTATTTCTACTATCGAGAGCATCTGCTAATAGTATGTGAGCTCCTGA
AGGCGAACTTGTATGAGTTCCATAAATTTAATAGAGAATCCGGAGGAGAG
GTCTATTTTACAATGCCGAGGTTGCAGTCTATTACTATCCAGTGTCTTGA
AGCTCTTCAATTCTTGCACGGCCTTGGACTTATTCATTGTGATTTGAAGC
CTGAAAACATCTTAGTGAAAAGTTATAGTAGATGTGAGGTGAAGGTCATT
GATCTTGGGAGTAGCTGTTTTGAGACAGATCATCTCTGCTCCTATGTTCA
ATCCAGGTCCTATCGTGCACCAGAAGTTATCCTTGGACTGTCATACGATA
AGAAGATAGACATATGGTCACTTGGCTGCATTTTGGCAGAACTCTGTACT
GGAAATGTTCTCTTCCAAAATGATTCTCCAGCAACATTACTTGCACGGGT
GATTGGGAATCATTGGTCCCATTGAA
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