CF417835

Overview
NameCF417835
Unique NameCF417835
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: CLK4_HUMAN (Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.216e-29
Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = 2
Query:   20 GMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV-----------------KSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ-NDSP--ATLLARVIG 607
            GM V VKI+KN   + + +  EI++L+++N  DP   +  +++ ++F +  H+ IV ELL  + Y+F K N      + F +  ++ +  Q  +++ FLH   L H DLKPENIL                  ++    ++KV+D GS+ ++ +H  + V +R YRAPEVIL L + +  D+WS+GCIL E   G  +FQ +DS     ++ R++G
Sbjct:  183 GMHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKEN----SFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILG 394          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK4_MACFA (Homeodomain-interacting protein kinase 4 OS=Macaca fascicularis GN=HIPK4 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.424e-29
Identity = 76/194 (39.18%), Postives = 118/194 (60.82%), Query Frame = 2
Query:   17 TGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMP--RLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRC--EVKVIDLGSSCFETDHLC---SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS 577
            TG  V +KI+KN+        +E+KLL  +   DP ++ H++R  ++F+      +V ELL+ NL+EF K N       +  +P   ++++T+Q L AL  L  L +IH DLKPENI++   +RC   VKVID GS+   ++       Y+QSR YRAPE++LGL + +K+D+WSLGC++AEL  G  L+  ++
Sbjct:   33 TGEMVAIKILKNDAYRNRIIKNELKLLHCMRGLDP-EEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENN------FAPLPARHIRTVTLQVLRALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLYPGNN 219          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HIPK4_HUMAN (Homeodomain-interacting protein kinase 4 OS=Homo sapiens GN=HIPK4 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.231e-28
Identity = 76/194 (39.18%), Postives = 118/194 (60.82%), Query Frame = 2
Query:   17 TGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMP--RLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRC--EVKVIDLGSSCFETDHLC---SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS 577
            TG  V +KI+KN+        +E+KLL  +   DP ++ H++R  ++F+      +V ELL+ NL+EF K N       +  +P   ++++T+Q L AL  L  L +IH DLKPENI++   +RC   VKVID GS+   ++       Y+QSR YRAPE++LGL + +K+D+WSLGC++AEL  G  L+  ++
Sbjct:   33 TGEMVAIKILKNDAYRNRIIKNELKLLHCMRGLDP-EEAHVIRFLEFFHDALKFYLVFELLEQNLFEFQKENN------FAPLPARHIRTVTLQVLTALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSASIFSEVRYVKEPYIQSRFYRAPEILLGLPFCEKVDVWSLGCVMAELHLGWPLYPGNN 219          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: CLK4_MOUSE (Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.608e-28
Identity = 71/216 (32.87%), Postives = 120/216 (55.56%), Query Frame = 2
Query:   20 GMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV-----------------KSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ-NDSP--ATLLARVIG 607
            G+ V VKI+KN   + + +  EI++L+++N  DP   +  +++ ++F +  H+ IV ELL  + Y+F K N      + F +  ++ +  Q  +++ FLH   L H DLKPENIL                  ++    ++KV+D GS+ ++ +H  + V +R YRAPEVIL L + +  D+WS+GCIL E   G  +FQ +DS     ++ R++G
Sbjct:  183 GLHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKEN----SFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILG 394          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: CLK1_MOUSE (Dual specificity protein kinase CLK1 OS=Mus musculus GN=Clk1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.608e-28
Identity = 76/216 (35.19%), Postives = 119/216 (55.09%), Query Frame = 2
Query:   20 GMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENIL-VKS-YSRC---------------EVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLA---RVIG 607
            G  V VKI+KN   + + +  EI++L+++N  DP   +  +++ ++F +R H+ IV ELL  + Y+F K N      + F M  ++ +  Q  +++ FLH   L H DLKPENIL VKS Y+                 ++KV+D GS+ ++ +H  + V +R YRAPEVIL L + +  D+WS+GCIL E   G  +F        LA   R++G
Sbjct:  184 GRRVAVKIVKNVDRYCEAAQSEIQVLEHLNTTDPHSTFRCVQMLEWFEHRGHICIVFELLGLSTYDFIKEN----SFLPFRMDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVKSDYTEAYNPKMKRDERTIVNPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSREHLAMMERILG 395          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: CLK1_HUMAN (Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.100e-28
Identity = 71/216 (32.87%), Postives = 118/216 (54.63%), Query Frame = 2
Query:   20 GMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENIL-------------VKSYSRC----EVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF---QNDSPATLLARVIG 607
            G  V VKI+KN   + + +  EI++L+++N  DP   +  +++ ++F +  H+ IV ELL  + Y+F K N    G + F +  ++ +  Q  +++ FLH   L H DLKPENIL             +K   R     ++KV+D GS+ ++ +H  + V +R YRAPEVIL L + +  D+WS+GCIL E   G  +F    +     ++ R++G
Sbjct:  185 GRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKEN----GFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILG 396          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: CLK2_MOUSE (Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.742e-28
Identity = 73/216 (33.80%), Postives = 119/216 (55.09%), Query Frame = 2
Query:   20 GMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV-----------------KSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ---NDSPATLLARVIG 607
            G  V +KIIKN + + + +  EI +L+ +N+ DP +K   ++++D+F Y  H+ I  ELL  + ++F K N      + + + +++ +  Q  +A++FLH   L H DLKPENIL                  +S     V+V+D GS+ F+ +H  + V +R YRAPEVIL L + +  D+WS+GCI+ E   G  LFQ   N     ++ R++G
Sbjct:  186 GTRVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNY----LPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILG 397          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: CLK2_HUMAN (Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.742e-28
Identity = 73/216 (33.80%), Postives = 119/216 (55.09%), Query Frame = 2
Query:   20 GMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV-----------------KSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ---NDSPATLLARVIG 607
            G  V +KIIKN + + + +  EI +L+ +N+ DP +K   ++++D+F Y  H+ I  ELL  + ++F K N      + + + +++ +  Q  +A++FLH   L H DLKPENIL                  +S     V+V+D GS+ F+ +H  + V +R YRAPEVIL L + +  D+WS+GCI+ E   G  LFQ   N     ++ R++G
Sbjct:  187 GARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNY----LPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILG 398          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: AFC1_ARATH (Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.321e-27
Identity = 75/221 (33.94%), Postives = 119/221 (53.85%), Query Frame = 2
Query:   29 VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV-------------------------KVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ---NDSPATLLARVIG 607
            V +K+I++   + + ++ EI +L+ + +HD G     +++ ++F YR H+ IV E L  +LY+F + N        F +  ++ +  Q LE++ ++H L LIH DLKPENIL+ S    ++                         K+ID GS+ FE       V +R YRAPEVILG+ ++   D+WS+GCIL ELC+G  LFQ   N     ++ RV+G
Sbjct:  141 VAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGS-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS----FPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGWNYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLG 356          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: DOA_DROME (Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.965e-26
Identity = 73/220 (33.18%), Postives = 120/220 (54.55%), Query Frame = 2
Query:    8 DLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENIL-----------------VKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ---NDSPATLLARVIG 607
            D+     + +KIIKN + + + +  EI  L+ + + DP   +  +++ D+F Y  H+ IV E+L  ++++F    RE+  E Y  + +++ +  Q   +++FLH   L H DLKPENIL                 V+     +V++ID GS+ F+ +H  + V +R YRAPEVIL L + +  D+WS+GCIL EL  G  LFQ   N     ++ R++G
Sbjct:  498 DMERDYCMALKIIKNVEKYREAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFL---RENNYEPY-PLDQVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKINREVRRVKNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLFQTHDNREHLAMMERILG 713          
The following BLAST results are available for this feature:
BLAST of CF417835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLK4_HUMAN7.216e-2933.33Dual specificity protein kinase CLK4 OS=Homo sapie... [more]
HIPK4_MACFA9.424e-2939.18Homeodomain-interacting protein kinase 4 OS=Macaca... [more]
HIPK4_HUMAN1.231e-2839.18Homeodomain-interacting protein kinase 4 OS=Homo s... [more]
CLK4_MOUSE1.608e-2832.87Dual specificity protein kinase CLK4 OS=Mus muscul... [more]
CLK1_MOUSE1.608e-2835.19Dual specificity protein kinase CLK1 OS=Mus muscul... [more]
CLK1_HUMAN2.100e-2832.87Dual specificity protein kinase CLK1 OS=Homo sapie... [more]
CLK2_MOUSE2.742e-2833.80Dual specificity protein kinase CLK2 OS=Mus muscul... [more]
CLK2_HUMAN2.742e-2833.80Dual specificity protein kinase CLK2 OS=Homo sapie... [more]
AFC1_ARATH2.321e-2733.94Serine/threonine-protein kinase AFC1 OS=Arabidopsi... [more]
DOA_DROME1.965e-2633.18Serine/threonine-protein kinase Doa OS=Drosophila ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-765 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417835 ID=CF417835; Name=CF417835; organism=Citrus sinensis; type=EST; length=626bp
AGCACATGACCTTCACACAGGCATGGATGTTTGTGTGAAAATTATTAAGA
ACAACAAAGATTTTTTTGATCAAAGCCTCGATGAGATAAAGCTTCTCAAG
TATGTCAACAAGCATGATCCCGGAGACAAATACCATCTTCTGCGTTTGTA
TGATTATTTCTACTATCGAGAGCATCTGCTAATAGTATGTGAGCTCCTGA
AGGCGAACTTGTATGAGTTCCATAAATTTAATAGAGAATCCGGAGGAGAG
GTCTATTTTACAATGCCGAGGTTGCAGTCTATTACTATCCAGTGTCTTGA
AGCTCTTCAATTCTTGCACGGCCTTGGACTTATTCATTGTGATTTGAAGC
CTGAAAACATCTTAGTGAAAAGTTATAGTAGATGTGAGGTGAAGGTCATT
GATCTTGGGAGTAGCTGTTTTGAGACAGATCATCTCTGCTCCTATGTTCA
ATCCAGGTCCTATCGTGCACCAGAAGTTATCCTTGGACTGTCATACGATA
AGAAGATAGACATATGGTCACTTGGCTGCATTTTGGCAGAACTCTGTACT
GGAAATGTTCTCTTCCAAAATGATTCTCCAGCAACATTACTTGCACGGGT
GATTGGGAATCATTGGTCCCATTGAA
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