CF417835

Overview
NameCF417835
Unique NameCF417835
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK09_RAT (Mitogen-activated protein kinase 9 OS=Rattus norvegicus GN=Mapk9 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.688e-20
Identity = 66/194 (34.02%), Postives = 101/194 (52.06%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ 568
            A D   G++V VK +     N+    ++  E+ LLK VN  +     ++          + + +V EL+ ANL +      +          R+  +  Q L  ++ LH  G+IH DLKP NI+VKS   C +K++D G +     +  +  YV +R YRAPEVILG+ Y + +DIWS+GCI+ EL  G V+FQ
Sbjct:   43 AFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH--------ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGCVIFQ 226          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK09_HUMAN (Mitogen-activated protein kinase 9 OS=Homo sapiens GN=MAPK9 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 4.688e-20
Identity = 66/194 (34.02%), Postives = 101/194 (52.06%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ 568
            A D   G++V VK +     N+    ++  E+ LLK VN  +     ++          + + +V EL+ ANL +      +          R+  +  Q L  ++ LH  G+IH DLKP NI+VKS   C +K++D G +     +  +  YV +R YRAPEVILG+ Y + +DIWS+GCI+ EL  G V+FQ
Sbjct:   43 AFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH--------ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGCVIFQ 226          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK09_CHICK (Mitogen-activated protein kinase 9 OS=Gallus gallus GN=MAPK9 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.688e-20
Identity = 66/194 (34.02%), Postives = 101/194 (52.06%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQ 568
            A D   G++V VK +     N+    ++  E+ LLK VN  +     ++          + + +V EL+ ANL +      +          R+  +  Q L  ++ LH  G+IH DLKP NI+VKS   C +K++D G +     +  +  YV +R YRAPEVILG+ Y + +DIWS+GCI+ EL  G V+FQ
Sbjct:   43 AFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDH--------ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGCVIFQ 226          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: JNK_DROME (Stress-activated protein kinase JNK OS=Drosophila melanogaster GN=bsk PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.688e-20
Identity = 67/199 (33.67%), Postives = 105/199 (52.76%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL------LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG--SSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            A+D  T  +V +K +     N     ++  E KL+K VN  +      ++ L + F  + +L       +V EL+ ANL +  + + +          R+  +  Q L  ++ LH  G+IH DLKP NI+VK+   C +K++D G   +   T  +  YV +R YRAPEVILG+ Y + +DIWS+GCI+ E+  G VLF
Sbjct:   41 AYDTITQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN------IIGLLNAFTPQRNLEEFQDVYLVMELMDANLCQVIQMDLDHD--------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKA--DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYTENVDIWSVGCIMGEMIRGGVLF 223          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HOG1_PICST (Mitogen-activated protein kinase HOG1 OS=Pichia stipitis GN=HOG1 PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 4.688e-20
Identity = 70/193 (36.27%), Postives = 103/193 (53.37%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIK---NNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIWSLGCILAELCTGNVLF 565
            A D  TG +V VK I    +      ++  E+KLLK++ KH+     +L+ L D F    E +  V EL   +L   H+       E  F    +Q  T Q L  L+++H  G+IH DLKP NIL+     C++K+ D G +  +   +  YV +R YRAPE++L    YD ++D+WS+GCILAE+  G  LF
Sbjct:   40 AVDKLTGQNVAVKKIMKPFSTSVLAKRTYRELKLLKHL-KHE-----NLITLDDIFLSPLEDIYFVNELQGTDL---HRLLTSRPLEKQF----IQYFTYQILRGLKYIHSAGVIHRDLKPSNILIN--ENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDTEVDLWSVGCILAEMIEGKPLF 217          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK14_PANTR (Mitogen-activated protein kinase 14 OS=Pan troglodytes GN=MAPK14 PE=2 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 7.997e-20
Identity = 69/213 (32.39%), Postives = 110/213 (51.64%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFD-----QSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL------LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            A D  TG+ V VK  K ++ F       ++  E++LLK++ KH+     +++ L D F     L       +V  L+ A+L    K  + +   V F       +  Q L  L+++H   +IH DLKP N+ V     CE+K++D G +    D +  YV +R YRAPE++L  + Y++ +DIWS+GCI+AEL TG  LF        L +++
Sbjct:   41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHM-KHE-----NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIM 236          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK14_HUMAN (Mitogen-activated protein kinase 14 OS=Homo sapiens GN=MAPK14 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 7.997e-20
Identity = 71/217 (32.72%), Postives = 113/217 (52.07%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFD-----QSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL------LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLF---QNDSPATLLARVIG 607
            A D  TG+ V VK  K ++ F       ++  E++LLK++ KH+     +++ L D F     L       +V  L+ A+L    K  + +   V F       +  Q L  L+++H   +IH DLKP N+ V     CE+K++D G +    D +  YV +R YRAPE++L  + Y++ +DIWS+GCI+AEL TG  LF    +     L+ R++G
Sbjct:   41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHM-KHE-----NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK14_CANFA (Mitogen-activated protein kinase 14 OS=Canis familiaris GN=MAPK14 PE=2 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 7.997e-20
Identity = 71/217 (32.72%), Postives = 113/217 (52.07%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFD-----QSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL------LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLF---QNDSPATLLARVIG 607
            A D  TG+ V VK  K ++ F       ++  E++LLK++ KH+     +++ L D F     L       +V  L+ A+L    K  + +   V F       +  Q L  L+++H   +IH DLKP N+ V     CE+K++D G +    D +  YV +R YRAPE++L  + Y++ +DIWS+GCI+AEL TG  LF    +     L+ R++G
Sbjct:   41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHM-KHE-----NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HOG1_SCHPO (Mitogen-activated protein kinase sty1 OS=Schizosaccharomyces pombe GN=sty1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.997e-20
Identity = 69/193 (35.75%), Postives = 102/193 (52.85%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIK---NNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIWSLGCILAELCTGNVLF 565
            A D  TGM+V VK I    +      ++  E+KLLK++ +H+     +++ L D F    E +  V ELL  +L   H+       E  F    +Q    Q L  L+F+H  G+IH DLKP NIL+     C++K+ D G +  +   +  YV +R YRAPE++L    Y+ ++DIWS GCI AE+  G  LF
Sbjct:   37 AKDQLTGMNVAVKKIMKPFSTPVLAKRTYRELKLLKHL-RHE-----NIISLSDIFISPFEDIYFVTELLGTDL---HRLLTSRPLETQF----IQYFLYQILRGLKFVHSAGVIHRDLKPSNILIN--ENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYNVEVDIWSAGCIFAEMIEGKPLF 214          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HOG1_CANAL (Mitogen-activated protein kinase HOG1 OS=Candida albicans GN=HOG1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 7.997e-20
Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIK---NNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIWSLGCILAELCTGNVLF 565
            A D  TG +V VK +    +      ++  E+KLLK++ KH+     +L+ L D F    E +  V EL   +L   H+       E  F    +Q  T Q +  L+++H  G+IH DLKP NIL+     C++K+ D G +  +   +  YV +R YRAPE++L    YD ++D+WS+GCILAE+  G  LF
Sbjct:   40 AVDRLTGQNVAVKKVMKPFSTSVLAKRTYRELKLLKHL-KHE-----NLITLDDIFISPLEDIYFVNELQGTDL---HRLLNSRPLEKQF----IQYFTYQIMRGLKYIHSAGVIHRDLKPSNILIN--ENCDLKICDFGLARLQDPQMTGYVSTRYYRAPEIMLTWQKYDTEVDLWSVGCILAEMIEGKPLF 217          
The following BLAST results are available for this feature:
BLAST of CF417835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK09_RAT4.688e-2034.02Mitogen-activated protein kinase 9 OS=Rattus norve... [more]
MK09_HUMAN4.688e-2034.02Mitogen-activated protein kinase 9 OS=Homo sapiens... [more]
MK09_CHICK4.688e-2034.02Mitogen-activated protein kinase 9 OS=Gallus gallu... [more]
JNK_DROME4.688e-2033.67Stress-activated protein kinase JNK OS=Drosophila ... [more]
HOG1_PICST4.688e-2036.27Mitogen-activated protein kinase HOG1 OS=Pichia st... [more]
MK14_PANTR7.997e-2032.39Mitogen-activated protein kinase 14 OS=Pan troglod... [more]
MK14_HUMAN7.997e-2032.72Mitogen-activated protein kinase 14 OS=Homo sapien... [more]
MK14_CANFA7.997e-2032.72Mitogen-activated protein kinase 14 OS=Canis famil... [more]
HOG1_SCHPO7.997e-2035.75Mitogen-activated protein kinase sty1 OS=Schizosac... [more]
HOG1_CANAL7.997e-2035.23Mitogen-activated protein kinase HOG1 OS=Candida a... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-765 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417835 ID=CF417835; Name=CF417835; organism=Citrus sinensis; type=EST; length=626bp
AGCACATGACCTTCACACAGGCATGGATGTTTGTGTGAAAATTATTAAGA
ACAACAAAGATTTTTTTGATCAAAGCCTCGATGAGATAAAGCTTCTCAAG
TATGTCAACAAGCATGATCCCGGAGACAAATACCATCTTCTGCGTTTGTA
TGATTATTTCTACTATCGAGAGCATCTGCTAATAGTATGTGAGCTCCTGA
AGGCGAACTTGTATGAGTTCCATAAATTTAATAGAGAATCCGGAGGAGAG
GTCTATTTTACAATGCCGAGGTTGCAGTCTATTACTATCCAGTGTCTTGA
AGCTCTTCAATTCTTGCACGGCCTTGGACTTATTCATTGTGATTTGAAGC
CTGAAAACATCTTAGTGAAAAGTTATAGTAGATGTGAGGTGAAGGTCATT
GATCTTGGGAGTAGCTGTTTTGAGACAGATCATCTCTGCTCCTATGTTCA
ATCCAGGTCCTATCGTGCACCAGAAGTTATCCTTGGACTGTCATACGATA
AGAAGATAGACATATGGTCACTTGGCTGCATTTTGGCAGAACTCTGTACT
GGAAATGTTCTCTTCCAAAATGATTCTCCAGCAACATTACTTGCACGGGT
GATTGGGAATCATTGGTCCCATTGAA
back to top