CF417835

Overview
NameCF417835
Unique NameCF417835
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK14A_CYPCA (Mitogen-activated protein kinase 14A OS=Cyprinus carpio GN=mapk14a PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.044e-19
Identity = 69/213 (32.39%), Postives = 110/213 (51.64%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFD-----QSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL------LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            A+D  TG+ V VK  K ++ F       ++  E++LLK++ KH+     +++ L D F     L       +V  L+ A+L    K  + +   V F       +  Q L  L+++H   +IH DLKP N+ V     CE+K++D G +    D +  YV +R YRAPE++L  + Y+  +DIWS+GCI+AEL TG  LF        L +++
Sbjct:   42 AYDEKTGLKVAVK--KLSRPFQSIIHAKRTYRELRLLKHM-KHE-----NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIM 237          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK08A_CYPCA (Mitogen-activated protein kinase 8A OS=Cyprinus carpio GN=mapk8a PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.364e-19
Identity = 65/193 (33.68%), Postives = 100/193 (51.81%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCS--YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            A+D +   +V +K +     N+    ++  E+ L+KYVN  +     ++          + + +V EL+ ANL +  +   +          RL  +  Q L  ++ LH  G+IH DLKP NI+VKS   C +K++D G +      L    YV +R YRAPEVILG+ Y   +DIWS+GCILAE+    +LF
Sbjct:   43 AYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKYVNHKNIICLLNVFTSQKTLDEFQDVYLVMELMDANLCQVIQMELDH--------ERLSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAATGLLMTPYVVTRYYRAPEVILGMGYQANVDIWSVGCILAEMVRHKILF 225          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MPKC_EMENI (Mitogen-activated protein kinase mpkC OS=Emericella nidulans GN=mpkC PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.781e-19
Identity = 69/195 (35.38%), Postives = 104/195 (53.33%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFDQSLD-----EIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLS-YDKKIDIWSLGCILAELCTGNVLF 565
            A+DL +   V +K  K  K F   S+      E+KLL+++ +HD     +L+ + D F    E + +V ELL  +L   H+       E  F     Q  T Q L  L+++H  G+IH DLKP N+L+     C++K+ D G +  +   +  YV +R YRAPE++L    Y  K+D+WS+GCILAE+  G  LF
Sbjct:   37 AYDLISEQVVAIK--KMMKPFHSTSVAKRTYREVKLLRHL-RHD-----NLINMSDIFISPLEDVYLVTELLGTDL---HRLLNGKPLESKFA----QYFTYQILRGLKYIHSAGVIHRDLKPGNLLINE--NCDLKICDFGLARVQEPQMTGYVSTRYYRAPEIMLTWQRYGSKVDLWSVGCILAEMLLGRPLF 214          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HOG1_DEBHA (Mitogen-activated protein kinase HOG1 OS=Debaryomyces hansenii GN=HOG1 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.781e-19
Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIK---NNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIWSLGCILAELCTGNVLF 565
            A D  TG +V VK I    +      ++  E+KLLK++ +H+     +L+ L D F    E +  V EL   +L   H+       E  F    +Q  T Q L  L+++H  G+IH DLKP NIL+     C++K+ D G +  +   +  YV +R YRAPE++L    YD ++D+WS+GCIL+E+  G  LF
Sbjct:   40 AIDKLTGQNVAVKKIMKPFSTSVLAKRTYRELKLLKHL-RHE-----NLITLDDIFLSPLEDIYFVTELQGTDL---HRLLTSRPLEKQF----IQYFTYQILRGLKYVHSAGVIHRDLKPSNILIN--ENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDTEVDLWSVGCILSEMIEGKPLF 217          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK14_RAT (Mitogen-activated protein kinase 14 OS=Rattus norvegicus GN=Mapk14 PE=2 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 2.327e-19
Identity = 71/217 (32.72%), Postives = 112/217 (51.61%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFD-----QSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL------LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLF---QNDSPATLLARVIG 607
            A D  TG  V VK  K ++ F       ++  E++LLK++ KH+     +++ L D F     L       +V  L+ A+L    K  + +   V F       +  Q L  L+++H   +IH DLKP N+ V     CE+K++D G +    D +  YV +R YRAPE++L  + Y++ +DIWS+GCI+AEL TG  LF    +     L+ R++G
Sbjct:   41 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHM-KHE-----NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK14_MOUSE (Mitogen-activated protein kinase 14 OS=Mus musculus GN=Mapk14 PE=1 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 2.327e-19
Identity = 71/217 (32.72%), Postives = 112/217 (51.61%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFD-----QSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL------LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLF---QNDSPATLLARVIG 607
            A D  TG  V VK  K ++ F       ++  E++LLK++ KH+     +++ L D F     L       +V  L+ A+L    K  + +   V F       +  Q L  L+++H   +IH DLKP N+ V     CE+K++D G +    D +  YV +R YRAPE++L  + Y++ +DIWS+GCI+AEL TG  LF    +     L+ R++G
Sbjct:   41 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHM-KHE-----NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK12_MOUSE (Mitogen-activated protein kinase 12 OS=Mus musculus GN=Mapk12 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.327e-19
Identity = 67/211 (31.75%), Postives = 111/211 (52.61%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL------LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            A D  TG  V +K +     ++ F  ++  E++LLK++ +H+     +++ L D F   E L       +V   +  +L +  K    S         R+Q +  Q L+ L+++H  G+IH DLKP N+ V     CE+K++D G +      +  YV +R YRAPEVIL  + Y + +DIWS+GCI+AE+ TG +LF+ +     L  ++
Sbjct:   44 AVDSRTGNKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHE-----NVIGLLDVFTPDESLDDFTDFYLVMPFMGTDLGKLMKHETLSED-------RIQFLVYQMLKGLKYIHAAGVIHRDLKPGNLAVNE--DCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKILFKGNDHLDQLKEIM 239          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK09_MOUSE (Mitogen-activated protein kinase 9 OS=Mus musculus GN=Mapk9 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.327e-19
Identity = 65/193 (33.68%), Postives = 100/193 (51.81%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            A D   G++V VK +     N+    ++  E+ LLK VN  +     ++          + + +V EL+ ANL +      +          R+  +  Q L  ++ LH  G+IH DLKP NI+VKS   C +K++D G +     +  +  YV +R YRAPEVILG+ Y + +DIWS+GCI+AE+    VLF
Sbjct:   43 AFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH--------ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMAEMVLHKVLF 225          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK08_XENLA (Mitogen-activated protein kinase 8 OS=Xenopus laevis GN=mapk8 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.327e-19
Identity = 55/134 (41.04%), Postives = 78/134 (58.21%), Query Frame = 2
Query:  170 EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG--SSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            + L IV EL+ ANL +  +   +          R+  +  Q L  ++ LH  G+IH DLKP NI+VKS   C +K++D G   +   +  +  YV +R YRAPEVILG+ Y + +DIWS+GCIL E+  G VLF
Sbjct:  102 QDLYIVMELMDANLCQVIQMELDH--------ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCILGEMIKGGVLF 225          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK08_DANRE (Mitogen-activated protein kinase 8 OS=Danio rerio GN=mapk8 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.327e-19
Identity = 64/193 (33.16%), Postives = 100/193 (51.81%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCS--YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            A+D     +V +K +     N+    ++  E+ L+K VN  +     ++          + + +V EL+ ANL +  +   +          RL  +  Q L  ++ LH  G+IH DLKP NI+VKS   C +K++D G +      L    YV +R YRAPEVILG+ Y   +D+WS+GCI+AE+  G+VLF
Sbjct:   43 AYDHVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH--------ERLSYLLYQMLCGIKHLHAAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAATGLLMTPYVVTRYYRAPEVILGMGYQANVDVWSIGCIMAEMVRGSVLF 225          
The following BLAST results are available for this feature:
BLAST of CF417835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK14A_CYPCA1.044e-1932.39Mitogen-activated protein kinase 14A OS=Cyprinus c... [more]
MK08A_CYPCA1.364e-1933.68Mitogen-activated protein kinase 8A OS=Cyprinus ca... [more]
MPKC_EMENI1.781e-1935.38Mitogen-activated protein kinase mpkC OS=Emericell... [more]
HOG1_DEBHA1.781e-1935.23Mitogen-activated protein kinase HOG1 OS=Debaryomy... [more]
MK14_RAT2.327e-1932.72Mitogen-activated protein kinase 14 OS=Rattus norv... [more]
MK14_MOUSE2.327e-1932.72Mitogen-activated protein kinase 14 OS=Mus musculu... [more]
MK12_MOUSE2.327e-1931.75Mitogen-activated protein kinase 12 OS=Mus musculu... [more]
MK09_MOUSE2.327e-1933.68Mitogen-activated protein kinase 9 OS=Mus musculus... [more]
MK08_XENLA2.327e-1941.04Mitogen-activated protein kinase 8 OS=Xenopus laev... [more]
MK08_DANRE2.327e-1933.16Mitogen-activated protein kinase 8 OS=Danio rerio ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-765 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417835 ID=CF417835; Name=CF417835; organism=Citrus sinensis; type=EST; length=626bp
AGCACATGACCTTCACACAGGCATGGATGTTTGTGTGAAAATTATTAAGA
ACAACAAAGATTTTTTTGATCAAAGCCTCGATGAGATAAAGCTTCTCAAG
TATGTCAACAAGCATGATCCCGGAGACAAATACCATCTTCTGCGTTTGTA
TGATTATTTCTACTATCGAGAGCATCTGCTAATAGTATGTGAGCTCCTGA
AGGCGAACTTGTATGAGTTCCATAAATTTAATAGAGAATCCGGAGGAGAG
GTCTATTTTACAATGCCGAGGTTGCAGTCTATTACTATCCAGTGTCTTGA
AGCTCTTCAATTCTTGCACGGCCTTGGACTTATTCATTGTGATTTGAAGC
CTGAAAACATCTTAGTGAAAAGTTATAGTAGATGTGAGGTGAAGGTCATT
GATCTTGGGAGTAGCTGTTTTGAGACAGATCATCTCTGCTCCTATGTTCA
ATCCAGGTCCTATCGTGCACCAGAAGTTATCCTTGGACTGTCATACGATA
AGAAGATAGACATATGGTCACTTGGCTGCATTTTGGCAGAACTCTGTACT
GGAAATGTTCTCTTCCAAAATGATTCTCCAGCAACATTACTTGCACGGGT
GATTGGGAATCATTGGTCCCATTGAA
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