CF417835

Overview
NameCF417835
Unique NameCF417835
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK12_RAT (Mitogen-activated protein kinase 12 OS=Rattus norvegicus GN=Mapk12 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19
Identity = 67/211 (31.75%), Postives = 111/211 (52.61%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL------LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            A D  TG  V +K +     ++ F  ++  E++LLK++ +H+     +++ L D F   E L       +V   +  +L +  K    S         R+Q +  Q L+ L+++H  G+IH DLKP N+ V     CE+K++D G +      +  YV +R YRAPEVIL  + Y + +DIWS+GCI+AE+ TG +LF+ +     L  ++
Sbjct:   44 AVDSRTGNKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHE-----NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHETLSED-------RIQFLVYQMLKGLKYIHAAGVIHRDLKPGNLAVNE--DCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKILFKGNDHLDQLKEIM 239          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK12_HUMAN (Mitogen-activated protein kinase 12 OS=Homo sapiens GN=MAPK12 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19
Identity = 69/211 (32.70%), Postives = 111/211 (52.61%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL------LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            A D  TG  V +K +     ++ F  ++  E++LLK++ +H+     +++ L D F   E L       +V   +  +L +  K   E  GE      R+Q +  Q L+ L+++H  G+IH DLKP N+ V     CE+K++D G +      +  YV +R YRAPEVIL  + Y + +DIWS+GCI+AE+ TG  LF+       L  ++
Sbjct:   44 AVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHE-----NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK--HEKLGE-----DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE--DCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM 239          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK08B_CYPCA (Mitogen-activated protein kinase 8B OS=Cyprinus carpio GN=mapk8b PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19
Identity = 64/193 (33.16%), Postives = 100/193 (51.81%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCS--YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 565
            A+D +   +V +K +     N+    ++  E+ L+K VN  +     ++          + + +V EL+ ANL +  +   +          RL  +  Q L   + LH  G+IH DLKP NI+VKS   C +K++D G +      L    YV +R YRAPEVILG+ Y   +D+WS+GCI+AE+  G+VLF
Sbjct:   43 AYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH--------ERLSYLLYQMLCGTKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAATGLLMTPYVVTRYYRAPEVILGMGYQANVDVWSVGCIMAEMVRGSVLF 225          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: JNK_SUBDO (Stress-activated protein kinase JNK OS=Suberites domuncula GN=JNK PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19
Identity = 65/185 (35.14%), Postives = 103/185 (55.68%), Query Frame = 2
Query:   38 KIIK--NNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL------LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG--SSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVL 562
            K++K   N+ +  ++  E++L+K V      D  +++ L + F   + L       IV EL+ ANL       R  G E+     R+  +  Q L  ++ LH  G+IH DLKP NI+VK    C +K++D G   +  +T ++  YV +R YRAPEVI+G+ Y + +DIWS+GCI AE+  G++L
Sbjct:   52 KLVKPFQNETYAKRAFRELRLMKMV------DHKNIIGLKNLFTPAKSLDDFQDVYIVMELMDANLC------RVIGIEL--DHDRMSYLLYQLLCGIKHLHSAGIIHRDLKPSNIVVKE--DCSLKILDFGLARTADQTFNMTPYVVTRYYRAPEVIVGMKYKENVDIWSVGCIFAEMIRGDIL 220          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK14B_DANRE (Mitogen-activated protein kinase 14B OS=Danio rerio GN=mapk14b PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.969e-19
Identity = 61/181 (33.70%), Postives = 96/181 (53.04%), Query Frame = 2
Query:   83 EIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL------LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            E++LLK++ KH+     +++ L D F     L       +V  L+ A+L    K  + +   V F       +  Q L AL+++H   +IH DLKP N+ V     CE+K++D G +    D +  YV +R YRAPE++L  + Y+  +DIWS+GCI+AEL TG  LF        L +++
Sbjct:   72 ELRLLKHM-KHE-----NVIGLLDVFSPATSLEGFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRALKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARLTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIM 237          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MK13_MOUSE (Mitogen-activated protein kinase 13 OS=Mus musculus GN=Mapk13 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.969e-19
Identity = 62/205 (30.24%), Postives = 106/205 (51.71%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 604
            A D  TG  V +K +     ++ F  ++  E+ LLK+++  +      ++ L D F     L    +      +      +  G E  F+  ++Q +  Q L+ L+++H  G++H DLKP N+ V     CE+K++D G +      +  YV +R YRAPEVIL  + Y++ +DIWS+GCI+AE+ TG  LF+       L +++
Sbjct:   42 AIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMHHEN------VIGLLDVFTPASSLRSFHDFYLVMPFMQTDLQKIMGME--FSEDKVQYLVYQMLKGLKYIHSAGIVHRDLKPGNLAVNE--DCELKILDFGLARHTDTEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 236          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HOG1_MYCGR (Mitogen-activated protein kinase Hog1 OS=Mycosphaerella graminicola GN=Hog1 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.969e-19
Identity = 72/195 (36.92%), Postives = 100/195 (51.28%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFDQSLD-----EIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIWSLGCILAELCTGNVLF 565
            A D  TG  V VK I   K F    L      E+KLLK++ KH+     +++ L D F    E +  V ELL  +L   H+       E  F    +Q    Q L  L+++H  G++H DLKP NILV     C++K+ D G +  +   +  YV +R YRAPE++L    YD ++DIWS GCI AE+  G  LF
Sbjct:   37 AKDQLTGQAVAVKKIM--KPFSTPVLSKRTYRELKLLKHL-KHE-----NVISLSDIFISPLEDIYFVTELLGTDL---HRLLTSRPLEKQF----IQYFLYQILRGLKYVHSAGVVHRDLKPSNILVN--ENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLF 214          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: HOG1_BOTFB (Mitogen-activated protein kinase hog1 OS=Botryotinia fuckeliana (strain B05.10) GN=hog1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.969e-19
Identity = 71/195 (36.41%), Postives = 101/195 (51.79%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFDQSLD-----EIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIWSLGCILAELCTGNVLF 565
            A D  TG +V VK I   K F    L      E+KLLK++ KH+     +++ L D F    E +  V ELL  +L   H+       E  F    +Q    Q L  L+++H  G++H DLKP NILV     C++K+ D G +  +   +  YV +R YRAPE++L    YD ++D+WS GCI AE+  G  LF
Sbjct:   37 AKDNLTGSNVAVKKIM--KPFSTPVLSKRTYRELKLLKHL-KHE-----NVISLSDIFISPLEDIYFVTELLGTDL---HRLLTSRPLEKQF----IQYFLYQILRGLKYVHSAGVVHRDLKPSNILVN--ENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDVWSAGCIFAEMLEGKPLF 214          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MPKC_ASPOR (Mitogen-activated protein kinase mpkC OS=Aspergillus oryzae GN=mpkC PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.183e-19
Identity = 71/211 (33.65%), Postives = 104/211 (49.29%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLS-YDKKIDIWSLGCILAELCTGNVLFQNDS---PATLLARVIGN 610
            A+D  T   V VK + N   N     ++  E+KLLK + +H+     +L+ L D F    E + +V ELL  +L    +          + M        Q L  L+++H  G+IH DLKP N+LV     C++K+ D G +  +   +  YV +R YRAPE++L    Y K +DIWS GCILAE+  G  LF          L+  V+GN
Sbjct:   36 AYDQITQQHVAVKKMMNPFANASIAKRTYREVKLLKQL-RHE-----NLIGLCDIFISPLEDIYLVTELLGTDLGRLLRARPLDNKFAQYFM-------YQILRGLKYIHSAGVIHRDLKPSNLLVNE--NCDLKICDFGLARVQEPQMTGYVSTRYYRAPEIMLTWQRYGKMVDIWSAGCILAEMLRGKPLFPGKDHIHQFFLITEVLGN 231          
BLAST of CF417835 vs. ExPASy Swiss-Prot
Match: MPK11_ORYSJ (Mitogen-activated protein kinase 11 OS=Oryza sativa subsp. japonica GN=MPK11 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.183e-19
Identity = 71/204 (34.80%), Postives = 107/204 (52.45%), Query Frame = 2
Query:    2 AHDLHTGMDVCVKIIKNNKDFFDQS---LDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG----------SSCFETDHLCSYVQSRSYRAPEVILGLSYDK---KIDIWSLGCILAELCTGNVLF 565
            A+D+HTG  V +K I N  +    +   L EIKLL+ +   D  +  H++       +R+ + +V EL++++L++  K N +   E Y      Q    Q L AL+++H   + H DLKP+NIL  +   C++K+ D G          ++ F TD    YV +R YRAPE + G  Y K    IDIWS+GCI AE+  G  LF
Sbjct:   43 ANDIHTGEKVAIKKIHNIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSKMDFRD-IYVVFELMESDLHQVIKANDDLTREHY------QFFLYQMLRALKYIHTANVYHRDLKPKNILANA--NCKLKICDFGLARVAFTDAPTTVFWTD----YVATRWYRAPE-LCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLF 232          
The following BLAST results are available for this feature:
BLAST of CF417835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK12_RAT3.039e-1931.75Mitogen-activated protein kinase 12 OS=Rattus norv... [more]
MK12_HUMAN3.039e-1932.70Mitogen-activated protein kinase 12 OS=Homo sapien... [more]
MK08B_CYPCA3.039e-1933.16Mitogen-activated protein kinase 8B OS=Cyprinus ca... [more]
JNK_SUBDO3.039e-1935.14Stress-activated protein kinase JNK OS=Suberites d... [more]
MK14B_DANRE3.969e-1933.70Mitogen-activated protein kinase 14B OS=Danio reri... [more]
MK13_MOUSE3.969e-1930.24Mitogen-activated protein kinase 13 OS=Mus musculu... [more]
HOG1_MYCGR3.969e-1936.92Mitogen-activated protein kinase Hog1 OS=Mycosphae... [more]
HOG1_BOTFB3.969e-1936.41Mitogen-activated protein kinase hog1 OS=Botryotin... [more]
MPKC_ASPOR5.183e-1933.65Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
MPK11_ORYSJ5.183e-1934.80Mitogen-activated protein kinase 11 OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-765 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417835 ID=CF417835; Name=CF417835; organism=Citrus sinensis; type=EST; length=626bp
AGCACATGACCTTCACACAGGCATGGATGTTTGTGTGAAAATTATTAAGA
ACAACAAAGATTTTTTTGATCAAAGCCTCGATGAGATAAAGCTTCTCAAG
TATGTCAACAAGCATGATCCCGGAGACAAATACCATCTTCTGCGTTTGTA
TGATTATTTCTACTATCGAGAGCATCTGCTAATAGTATGTGAGCTCCTGA
AGGCGAACTTGTATGAGTTCCATAAATTTAATAGAGAATCCGGAGGAGAG
GTCTATTTTACAATGCCGAGGTTGCAGTCTATTACTATCCAGTGTCTTGA
AGCTCTTCAATTCTTGCACGGCCTTGGACTTATTCATTGTGATTTGAAGC
CTGAAAACATCTTAGTGAAAAGTTATAGTAGATGTGAGGTGAAGGTCATT
GATCTTGGGAGTAGCTGTTTTGAGACAGATCATCTCTGCTCCTATGTTCA
ATCCAGGTCCTATCGTGCACCAGAAGTTATCCTTGGACTGTCATACGATA
AGAAGATAGACATATGGTCACTTGGCTGCATTTTGGCAGAACTCTGTACT
GGAAATGTTCTCTTCCAAAATGATTCTCCAGCAACATTACTTGCACGGGT
GATTGGGAATCATTGGTCCCATTGAA
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