CF417839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.008e-45 Identity = 90/138 (65.22%), Postives = 115/138 (83.33%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 ECQS+RLTVED +VE I+++IAG+QQ+YTQSGGVRPFG+STLIVGFD G P+LYQTDPSG++S+WKA A GR+S S+ EFLE NY + S +E+IKLA+RALLE+VESG KNIE+AV+ ++ + LDE EID +V Sbjct: 93 ECQSYRLTVEDSPSVEYISKFIAGIQQRYTQSGGVRPFGISTLIVGFDT-DGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEKNYTDVSEEESIKLAVRALLEIVESGNKNIEIAVIRNKQPIVLLDEQEIDKLV 229
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.426e-45 Identity = 95/141 (67.38%), Postives = 112/141 (79.43%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 ECQSHRLTVEDPVTVE ITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLE NY + + + TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+ EI+ V Sbjct: 90 ECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIEKYV 229
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.426e-45 Identity = 95/141 (67.38%), Postives = 112/141 (79.43%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 ECQSHRLTVEDPVTVE ITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLE NY + + + TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+ EI+ V Sbjct: 90 ECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIEKYV 229
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.302e-44 Identity = 92/141 (65.25%), Postives = 113/141 (80.14%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 ECQSH+LTVEDPVTVE ITR+IA L+QKYTQS G RPFG+S LIVGFD G+P LYQTDPSGT+ AWKANA GR++ ++REFLE NY E ++ +E IKLAI+ALLEVV+SGGKNIE+A++ R++ LK EI+ V Sbjct: 92 ECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDD-DGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEVVQSGGKNIELAIIRRDQPLKMFSAKEIELEV 231
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.302e-44 Identity = 94/141 (66.67%), Postives = 112/141 (79.43%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 ECQSHRLTVEDPVTVE ITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLE +Y + + + TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+ EI+ V Sbjct: 90 ECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIERYV 229
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.302e-44 Identity = 94/141 (66.67%), Postives = 112/141 (79.43%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 ECQSHRLTVEDPVTVE ITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLE +Y + + + TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+ EI+ V Sbjct: 90 ECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIERYV 229
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.700e-44 Identity = 92/141 (65.25%), Postives = 110/141 (78.01%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 ECQSH+LTVEDPVTVE ITR+IA L+QKYTQS G RPFG+S LIVGFD G+P LYQTDPSGT+ AWKANA GR++ ++REFLE NY E S E IKLAI+ALLEVV+SGGKNIE+A++ R + LK E++ V Sbjct: 92 ECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDD-DGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLEVVQSGGKNIELAIIRRNQPLKMFSAKEVELYV 231
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_RAT (Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.900e-44 Identity = 94/141 (66.67%), Postives = 110/141 (78.01%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 ECQSHRLTV DPVTVE ITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLE NY + + + TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L EI+ V Sbjct: 96 ECQSHRLTVGDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILSPEEIEKYV 235
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 2.900e-44 Identity = 94/141 (66.67%), Postives = 111/141 (78.72%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 ECQSHRLTVED VTVE ITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLE NY + + + TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+ EI+ V Sbjct: 90 ECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIEEYV 229
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 1.439e-43 Identity = 91/141 (64.54%), Postives = 109/141 (77.30%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 ECQSH+LTVEDPVTVE ITR+IA L+QKYTQS G RPFG+S LIVGFD G+ LYQTDPSGT+ AWKANA GR++ ++REFLE NY E S E IKLAI+ALLEVV+SGGKNIE+A++ R + LK E++ V Sbjct: 98 ECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDD-DGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQSGGKNIELAIIRRNQPLKMFSAKEVELYV 237 The following BLAST results are available for this feature:
BLAST of CF417839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417839 ID=CF417839; Name=CF417839; organism=Citrus sinensis; type=EST; length=644bpback to top |