CF417839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.140e-40 Identity = 81/142 (57.04%), Postives = 104/142 (73.24%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE----TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 E QSHRLT+EDPVTVE +TRY+AG+QQ+YTQSGGVRPFG+STLI GFDP P LYQT+PSG +S+W A GRNS ++REFLE NY + +E +KL +R+LLEVV++G KNIE+ V+ + + L EI+ V Sbjct: 92 EAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQYV 233
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.140e-40 Identity = 89/136 (65.44%), Postives = 104/136 (76.47%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAE 400 ECQSHRLTVEDPVTVE ITRYIA L+Q+YTQS RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+R E NY + + + TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L E Sbjct: 90 ECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILTSPE 224
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_SCHPO (Probable proteasome subunit alpha type-7 OS=Schizosaccharomyces pombe GN=SPBC106.16 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.649e-37 Identity = 76/139 (54.68%), Postives = 103/139 (74.10%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE-TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 E Q+H+L + DPV++E +TRY+AG+QQKYTQSGGVRPFG+STLI GFD P +YQT+P+G ++AWKA A GR S + RE+LE N+KE S ETI LA+ +LLEVV++ NIE+A+M K ++ L +ID +V Sbjct: 91 EAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDETIHLAVSSLLEVVQTASGNIELAIMDPGKDVEFLHSDKIDTIV 229
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA71_DROVI (Proteasome subunit alpha type-7-1 OS=Drosophila virilis GN=Pros28.1 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.796e-36 Identity = 82/137 (59.85%), Postives = 100/137 (72.99%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEI 403 ECQSHRL VEDPVT+E ITRYIA L+QKYTQS G RPFG+S LI GFD G P L+QT+PSG F +KANATG ++ ++REF E Y+E ++ + +KLAIRALLEV +SG N+EVA+M K LK LD I Sbjct: 90 ECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDA-DGSPYLFQTEPSGIFYEYKANATGCSAKTVREFFEKQYREEEVSTERGAVKLAIRALLEVAQSGQHNLEVAIMENGKPLKMLDRKVI 225
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.461e-35 Identity = 80/133 (60.15%), Postives = 97/133 (72.93%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLD 391 ECQSHRL VEDPVT+E ITR+IA L+QKYTQS G RPFG+S LI GFD G L+QT+PSG F +KANATGR++ +REF E +Y+E + +KLAIRALLEV +SG N+EVA+M K LK LD Sbjct: 92 ECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDA-DGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRALLEVAQSGQNNLEVAIMENGKPLKMLD 223
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.018e-29 Identity = 69/144 (47.92%), Postives = 99/144 (68.75%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTR---EKGLKQLDEAEIDAMV 415 ECQS++LT+EDPVTV I+RYIA +Q++TQS G RPFG+S LI GFD + G P L++T+PSG + + ANATGR +RE+LE Y E + + T+KL +++L +VV G +NIE+AVM + E + L EI+A++ Sbjct: 91 ECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFD-HDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTLKLVVKSLAQVVPPGSQNIEIAVMKKVNDELQQRVLSTEEIEALL 233
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA72_DROME (Proteasome subunit alpha type-7-1A OS=Drosophila melanogaster GN=Pros28.1A PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.442e-29 Identity = 72/141 (51.06%), Postives = 92/141 (65.25%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415 ECQSHRL E+ VT+E ITRY+A L+QKYTQ G RPFG+S LI G D G L+ T+PSG F +KA ATGR +N++REF E Y + T+ + IKLA+RALLEV + +EVAV+ K +K LD I +V Sbjct: 92 ECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDA-DGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQMSQMRLEVAVLENGKPMKMLDSVVISEIV 231
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.466e-27 Identity = 64/131 (48.85%), Postives = 87/131 (66.41%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE-TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLD 391 ECQ RL+ ED + V+ + RY+A +QQ+ TQS G RP+G+ST+I GF+ G P L++T+PSGT SAW A A GRN + EF+E NY++ + + AI+ALLE VESG KNIE+ V+ R K D Sbjct: 90 ECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNE-NGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGMTRDRCVHFAIKALLEAVESGSKNIELLVLERGKAAYMSD 219
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA73_DROME (Proteasome subunit alpha type-7-1B OS=Drosophila melanogaster GN=Pros28.1B PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.727e-26 Identity = 67/134 (50.00%), Postives = 84/134 (62.69%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE--TSGQE--TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLD 391 E QSHRL E P TVE ITRYIA L+Q YTQS G RPFGLS L+ GFD G P L+QTDPSG F W+AN TGR+S +R+++E + E T E IK +R L+ V +EVAV+ + L+ +D Sbjct: 92 EAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDE-DGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTLVSVSSLNHTQMEVAVLKYRQPLRMID 224
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.022e-21 Identity = 57/138 (41.30%), Postives = 87/138 (63.04%), Query Frame = 2 Query: 11 SHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYK-ETSGQETIKLAIRALLEVVE-SGGKNIEVAVMT-REKGLKQLDEAEIDAMV 415 SHR ++P+ VE +T+ + L+Q+YTQ GG RPFG++ LI G D + LYQTDPSG + + A A G S ++ EFLE NYK + E I+LA++AL VE + N+EVA T EK ++++ + E+ +++ Sbjct: 99 SHRFIYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGVDRHGA--RLYQTDPSGVYIGYFATAIGAESGTITEFLEKNYKFDMEMGECIELALKALASAVEITDSANVEVAYATIEEKKMRKMSQDEVASLL 234 The following BLAST results are available for this feature:
BLAST of CF417839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417839 ID=CF417839; Name=CF417839; organism=Citrus sinensis; type=EST; length=644bpback to top |