CF417839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA73_DROVI (Proteasome subunit alpha type-7-1B OS=Drosophila virilis GN=Pros28.1B PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.450e-21 Identity = 58/124 (46.77%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETS----GQETIKLAIRALLEVVESGGKNIEVAVM 361 E QSHRL + P +VE ITRY+A L+Q YTQS RPFG+S LI GFD G P L+QTDPSG + W AN TGR ++ E+LE N S +K +RAL +IE+AV+ Sbjct: 89 EAQSHRLNFDRPASVEYITRYLARLKQTYTQSVARRPFGVSCLIGGFDE-DGRPRLFQTDPSGIYYEWSANTTGRLGQTVNEYLEKNTAAISRTPDAASAMKHVVRALFTATSLDPASIELAVL 211
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.685e-21 Identity = 60/138 (43.48%), Postives = 83/138 (60.14%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYK-ETSGQETIKLAIRALLEVVES-GGKNIEVAVMT-REKGLKQLDEAEID 406 E Q HRLT +P + I + I L+Q +TQ GGVRPFG + L+ G + P LY+TDPSG + AWKA A G N+ E YK + S +E IKLAI AL + +E +NIEVA++T ++K ++L EI+ Sbjct: 97 EAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNE---KPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTMEKPSAENIEVAIITVKDKKFRKLSREEIE 231
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.814e-20 Identity = 59/138 (42.75%), Postives = 83/138 (60.14%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYK-ETSGQETIKLAIRALLEVVES-GGKNIEVAVMT-REKGLKQLDEAEID 406 E Q HRLT +P + I + I L+Q +TQ GGVRPFG + L+ G + P LY+TDPSG + AWKA A G N+ E Y+ + + E IKLAI AL + +E +NIEVAV+T ++K ++L + EI+ Sbjct: 97 EAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVN---DKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTMEKPSAENIEVAVITVKDKKFRKLSKEEIE 231
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA2_DROME (Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.981e-20 Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 2 Query: 8 QSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE-TSGQETIKLAIRALLEVVES--GGKNIEVAVMTREKGLKQLDEAEI 403 Q++ LT ++P+ V + + +A L Q+YTQSGGVRPFG+S LI G+D P LYQ+DPSG + AWKA A G+N+ + + FLE Y E + + AI L E E NIE+ + + G ++LD A I Sbjct: 95 QTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWD--NDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTLKEGFEGKMTADNIEIGICD-QNGFQRLDPASI 226
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.110e-19 Identity = 57/138 (41.30%), Postives = 82/138 (59.42%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSG-QETIKLAIRALLEVVES-GGKNIEVAVMT-REKGLKQLDEAEID 406 E Q +RLT +P V I + I L+Q +TQ GGVRPFG + L+ G + P LY+TDPSG + AWKA A G N+ E Y++ ++ IKLA+ AL + +E+ NIEVAV+T ++K ++L EI+ Sbjct: 97 EAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGINDR---PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTMENPSADNIEVAVITVKDKKFRKLTRDEIE 231
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.449e-19 Identity = 57/135 (42.22%), Postives = 79/135 (58.52%), Query Frame = 2 Query: 8 QSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE-TSGQETIKLAIRALLEVVES--GGKNIEVAVMTREKGLKQLDEAEI 403 Q + L ++P+ + + +A + Q+YTQSGGVRPFG+S LI G+D G P L+Q+DPSG + AWKA A G+N + + FLE Y E ++ I AI L E E NIEV + E G K+L AE+ Sbjct: 95 QQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWD--EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGI-CNEAGFKRLTPAEV 226
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.449e-19 Identity = 54/129 (41.86%), Postives = 77/129 (59.69%), Query Frame = 2 Query: 29 EDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSG-QETIKLAIRALLEVVES--GGKNIEVAVMTREKGLKQLDEAEID 406 ++P+ V + R A + Q++TQSGGVRPFG+S L+ G+D P LYQ DPSG++ +WKA+A G+N ++ + FLE Y E + I AI L E E KNIE+ + +K + L AEID Sbjct: 102 KEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKG--PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEIGKIGTDKVFRVLTPAEID 228
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.449e-19 Identity = 54/129 (41.86%), Postives = 77/129 (59.69%), Query Frame = 2 Query: 29 EDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSG-QETIKLAIRALLEVVES--GGKNIEVAVMTREKGLKQLDEAEID 406 ++P+ V + R A + Q++TQSGGVRPFG+S L+ G+D P LYQ DPSG++ +WKA+A G+N ++ + FLE Y E + I AI L E E KNIE+ + +K + L AEID Sbjct: 102 KEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKG--PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEIGKIGADKVFRVLTPAEID 228
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.472e-19 Identity = 50/130 (38.46%), Postives = 83/130 (63.85%), Query Frame = 2 Query: 14 HRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE-TSGQETIKLAIRALLEVVESGGK----NIEVAVMTREKGLKQL 388 HRL ++P++++ +T+ I+ ++Q YTQ GGVRPFG++ ++ G D GV L+ T+PSG F ++A A G+ + ++LE NYKE S +ETI LA+ AL ++ G K N+E+ T+E +++ Sbjct: 101 HRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGGVD--RGVTKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKEDLSVEETILLALNALKVTLKPGEKLGPGNVEIGFATKEGQFRKM 228
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.217e-19 Identity = 53/137 (38.69%), Postives = 78/137 (56.93%), Query Frame = 2 Query: 2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSG-QETIKLAIRALLEVVES--GGKNIEVAVMTREKGLKQLDEAEI 403 + Q + ++ + V + R A + Q++TQSGGVRPFG+S LI G+D P LYQ DPSG++ +WKA+A G+N ++ + FLE Y E + I AI L E E NIE+ ++ ++ K L AEI Sbjct: 93 QAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDD--NGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGIIRSDREFKVLSPAEI 227 The following BLAST results are available for this feature:
BLAST of CF417839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417839 ID=CF417839; Name=CF417839; organism=Citrus sinensis; type=EST; length=644bpback to top |