CF417847
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_RICFE (Thioredoxin OS=Rickettsia felis GN=trxA PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16 Identity = 33/80 (41.25%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 347 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQE 586 +T+S F VL+S+ PVLV+F A WCGPC+++ P ++ +++E ++ V+K++ D NP + EY + +PT++LFKNG++ Sbjct: 5 VTDSSFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELKGKVKVLKMNIDENPNIPSEYGIRSIPTIMLFKNGEQ 84
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15 Identity = 38/107 (35.51%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 326 ASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYID 646 A + + + +S + V+ SE PVLV+F A WCGPCR++AP ++ LA+EY ++ K++ D +P +Y + +PT++ FKNG+ + GA+ K L E ++ Sbjct: 65 AVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGER--KDSVIGAVPKATLSEKVE 169
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_THIRO (Thioredoxin (Fragment) OS=Thiocapsa roseopersicina GN=trxA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.543e-15 Identity = 35/85 (41.18%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 329 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQ 583 S I +T+ F + VLKS PVLV++ A+WCGPC+++AP ++ +A EY R+ V K++ D NP Y + G+PTL+L + + Sbjct: 2 SDSIVHVTDDSFEDEVLKSLEPVLVDYWADWCGPCKMIAPVLDEIAGEYAGRIKVAKLNIDENPNTPRRYGIRGIPTLMLSRQSE 86
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_RICBR (Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.543e-15 Identity = 37/102 (36.27%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 341 TEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYID 646 + +T+ F VLKS+ PVLV+F A WC PCR++ P +E ++++ ++ V+K++ D NP++ +Y + +PT++LFKNG++ + + G K L E+I+ Sbjct: 3 SNVTDKSFEEEVLKSDLPVLVDFWAEWCSPCRMLTPIIEEISKDLESKVKVLKMNIDENPEIPSKYGIRSIPTVMLFKNGEQ--KDTKVGLHQKNSLIEWIN 102
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO1_CORNE (Thioredoxin C-1 OS=Corynebacterium nephridii PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.543e-15 Identity = 37/100 (37.00%), Postives = 65/100 (65.00%), Query Frame = 2 Query: 344 EITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYI 643 ++ S F + VL+S PV+V+F A WCGPC+++APA++ +A E ++ + K++ D NP+L ++ V +PTL++FK+G+ + GA K L ++I Sbjct: 4 KVDNSNFQSDVLQSSEPVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDENPELAAQFGVRSIPTLLMFKDGELA--ANMVGAAPKSRLADWI 101
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_HAEIN (Thioredoxin OS=Haemophilus influenzae GN=trxA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15 Identity = 38/105 (36.19%), Postives = 68/105 (64.76%), Query Frame = 2 Query: 332 SGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYID 646 S + I +++F + V+ S+ P+L++F A WCGPC+++AP ++ LA E+ ++ +VK++ D N ++ V +PTL+L KNGQ V + + GA+ K L +I+ Sbjct: 2 SEVLHINDADFESVVVNSDIPILLDFWAPWCGPCKMIAPVLDELAPEFAGKVKIVKMNVDDNQATPAQFGVRSIPTLLLIKNGQVV--ATQVGALPKTQLANFIN 104
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_ALIAC (Thioredoxin OS=Alicyclobacillus acidocaldarius GN=trxA PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15 Identity = 34/83 (40.96%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 347 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPE 595 +T++ F + + ++PVLV+F A WCGPCR++AP +E A+ + D++TV K++ D NP+ ++ + +PTLILFK G+ V + Sbjct: 5 LTDANFQQAI-QGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQ 86
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: TRXM_BRANA (Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 53/187 (28.34%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 113 SNSTLLFKQQPLVAPVRTVTVTHRQQNIITSAXXXXXXPSKNQLLFGSRTNLSLKSYNXTLPRLAIR---VRCGA---SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYIDTLL 655 S+ + + + ++A +TV+++ RQ + G RT +SL S + +R + C A ++GI + +S + + VLK++ PV+V+F A WCGPC+++ P V LAQ+Y ++ K++ D +P +Y V +PT+++F G++ + GA+ K L ID L Sbjct: 8 SSPPISLRSEMMIASSKTVSLSTRQMFSVG----------------GLRTRVSLSSVSKNSRASRLRRGGIICEAQDTATGIPMVNDSTWESLVLKADEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTDDSPATPGKYGVRSIPTIMIFVKGEK--KDTIIGAVPKTTLATSIDKFL 176
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_CYAME (Thioredoxin OS=Cyanidioschyzon merolae GN=trxA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 347 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEV 589 I E F N VL+SE+ VLV+F A WCGPCR++ P +E +A+E+ L VV+++ D NP L Y + +PTL+LFK GQ V Sbjct: 4 IDELTFENEVLQSEKLVLVDFWAPWCGPCRMIGPILEEIAKEF--NLKVVQVNTDENPNLATFYGIRSIPTLMLFKKGQRV 82
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: TRXM_WHEAT (Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15 Identity = 50/160 (31.25%), Postives = 78/160 (48.75%), Query Frame = 2 Query: 251 GSRTNLSLKSYNXTLPRLAI--------------------RVRCGASSGITEIT---ESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYIDTLLDS 661 G R LS SY + PR A R C + + E+ E + N V+ E PVLVEF A WCGPCR++AP ++ LA++Y ++ K++ D P + Y + +PT+++FK+G++ + GA+ K L ID + S Sbjct: 18 GIRERLSSGSYAPSRPRTAAPAVVSPSPYKSALVAARRPSRFVCKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEK--KESVIGAVPKTTLCTIIDKYIGS 175 The following BLAST results are available for this feature:
BLAST of CF417847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417847 ID=CF417847; Name=CF417847; organism=Citrus sinensis; type=EST; length=720bpback to top |