CF417854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417854 vs. ExPASy Swiss-Prot
Match: THS2_ARAHY (Putative stilbene synthase 2 (Fragment) OS=Arachis hypogaea PE=5 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.762e-38 Identity = 72/120 (60.00%), Postives = 86/120 (71.67%), Query Frame = 3 Query: 294 IVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGMFRRRHCSSPR*RLG*EQQGALAFLLSVRXITAVTFRGPADTHLDSLVGQALF 653 +++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L LLGL PSVKR+MMY QG F L + A ++ TAVTFRGP++T +DSLVGQALF Sbjct: 21 MMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSEN-TAVTFRGPSETDMDSLVGQALF 139 HSP 2 Score: 42.743 bits (99), Expect = 4.762e-38 Identity = 18/20 (90.00%), Postives = 19/20 (95.00%), Query Frame = 2 Query: 233 LKENPNMCAYMAPSLDARQD 292 LKENPNMCAY APSLDAR+D Sbjct: 1 LKENPNMCAYKAPSLDARED 20
BLAST of CF417854 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.616e-37 Identity = 82/112 (73.21%), Postives = 87/112 (77.68%), Query Frame = 3 Query: 318 LGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGMFRRRHCSSPR*RLG*EQQGALAFLLSVRXITAVTFRGPADTHLDSLVGQALF 653 LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRP VKR+MMYQQG F L +GA L+ +TAVTFRGP+DTHLDSLVGQALF Sbjct: 1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGA-RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF 111
BLAST of CF417854 vs. ExPASy Swiss-Prot
Match: CHS7_MEDSA (Chalcone synthase (Fragment) OS=Medicago sativa GN=CHSII PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23 Identity = 62/93 (66.67%), Postives = 67/93 (72.04%), Query Frame = 3 Query: 375 ITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGMFRRRHCSSPR*RLG*EQQGALAFLLSVRXITAVTFRGPADTHLDSLVGQALF 653 ITHLI CTTS VDMPGADYQLTKLLGLRP VKR+MMYQQG F L +GA L+ +TAVTFRGP+DTHLDSLVGQALF Sbjct: 1 ITHLIVCTTS-VDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGA-RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF 91
BLAST of CF417854 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.351e-11 Identity = 44/156 (28.21%), Postives = 75/156 (48.08%), Query Frame = 3 Query: 27 RNAQRXDGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEI*RKIPTCALTWLHHSTHVKTIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQG 494 R + + + + VL IG + P ++Q D + E EK KR+ ++S IK R+ L + + + L T V VP L ++A +A+K+WG K ITH++ T++G+ +P +++L LLGL V+R + G Sbjct: 2778 RLSYKSNNNSFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKTRH--LVRDYTKPENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMG 2929 The following BLAST results are available for this feature:
BLAST of CF417854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417854 ID=CF417854; Name=CF417854; organism=Citrus sinensis; type=EST; length=653bpback to top |