CF417867
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.749e-25 Identity = 75/170 (44.12%), Postives = 93/170 (54.71%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 89 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.590e-25 Identity = 75/170 (44.12%), Postives = 93/170 (54.71%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 89 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.590e-25 Identity = 73/167 (43.71%), Postives = 91/167 (54.49%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR---SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E R +E E+IHCRWAML G + PE L G W +A GG YLGNP + ++ I + + + FVE R + K YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+ENL H+ADP NN Sbjct: 89 ETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGG-LDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLYDHVADPVANN 253
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.590e-25 Identity = 75/170 (44.12%), Postives = 93/170 (54.71%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 91 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.590e-25 Identity = 73/168 (43.45%), Postives = 91/168 (54.17%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEKDP----EKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E R +E E+IH RWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R P E YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GP+ENLA HLADP +NN Sbjct: 90 ETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGG-LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLADPVNNN 255
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.590e-25 Identity = 75/170 (44.12%), Postives = 93/170 (54.71%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 90 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 254
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.590e-25 Identity = 73/168 (43.45%), Postives = 91/168 (54.17%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEKDP----EKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E R +E E+IH RWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R P E YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GP+ENLA HLADP +NN Sbjct: 90 ETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGG-LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLADPVNNN 255
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.689e-25 Identity = 75/170 (44.12%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 91 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.689e-25 Identity = 73/167 (43.71%), Postives = 91/167 (54.49%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR---SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E R +E E+IHCRWAML G + PE L G W +A GG YLGNP V ++ I + + + FVE R + K YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GP+ENL+ H+ DP NN Sbjct: 89 ETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLSDHINDPVANN 253
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.124e-25 Identity = 75/170 (44.12%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 91 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255 The following BLAST results are available for this feature:
BLAST of CF417867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417867 ID=CF417867; Name=CF417867; organism=Citrus sinensis; type=EST; length=618bpback to top |