CF417871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417871 vs. ExPASy Swiss-Prot
Match: TBB_PLAFA (Tubulin beta chain OS=Plasmodium falciparum PE=3 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 4.849e-108 Identity = 122/141 (86.52%), Postives = 135/141 (95.74%), Query Frame = 2 Query: 32 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 454 MREI+HIQ GQCGNQIGAKFWEVI DEHGID +G YSGDSDLQLER++V+YNEA+GGRYVPRA+LMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELID+VLDV+RKEAE CDCLQGFQ+ HSLGG Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGTYSGDSDLQLERVDVFYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDAVLDVLRKEAEGCDCLQGFQITHSLGG 141 HSP 2 Score: 142.124 bits (357), Expect = 4.849e-108 Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 3 Query: 453 GGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRT 674 GGTGSGMGTLLISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRT Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRT 214
BLAST of CF417871 vs. ExPASy Swiss-Prot
Match: TBB1_PHYPO (Tubulin beta-1 chain OS=Physarum polycephalum GN=BETA PE=1 SV=4) HSP 1 Score: 273.092 bits (697), Expect = 6.325e-108 Identity = 126/141 (89.36%), Postives = 135/141 (95.74%), Query Frame = 2 Query: 32 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 454 MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y G+SDLQLERINVYYNEA+GG+YVPRAVL+DLEPGTMDSVR+GPFGQIFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE+CDCLQGFQ+ HSLGG Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGESDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQIAHSLGG 141 HSP 2 Score: 137.887 bits (346), Expect = 6.325e-108 Identity = 68/74 (91.89%), Postives = 69/74 (93.24%), Query Frame = 3 Query: 453 GGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRT 674 GGTGSGMGTLLISKIREEYPDRMM TFSV PSPKVSDTVVEPYNATLSVHQLVENADE M +DNEALYDI FRT Sbjct: 141 GGTGSGMGTLLISKIREEYPDRMMCTFSVVPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDISFRT 214
BLAST of CF417871 vs. ExPASy Swiss-Prot
Match: TBB_PLAFK (Tubulin beta chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=2) HSP 1 Score: 268.47 bits (685), Expect = 8.255e-108 Identity = 122/141 (86.52%), Postives = 134/141 (95.04%), Query Frame = 2 Query: 32 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 454 MREI+HIQ GQCGNQIGAKFWEVI DEHGID +G Y GDSDLQLER++V+YNEA+GGRYVPRA+LMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELID+VLDVVRKEAE CDCLQGFQ+ HSLGG Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGTYCGDSDLQLERVDVFYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDAVLDVVRKEAEGCDCLQGFQITHSLGG 141 HSP 2 Score: 142.124 bits (357), Expect = 8.255e-108 Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 3 Query: 453 GGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRT 674 GGTGSGMGTLLISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRT Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRT 214
BLAST of CF417871 vs. ExPASy Swiss-Prot
Match: TBB_PLAF7 (Tubulin beta chain OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0084 PE=3 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 8.255e-108 Identity = 122/141 (86.52%), Postives = 134/141 (95.04%), Query Frame = 2 Query: 32 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 454 MREI+HIQ GQCGNQIGAKFWEVI DEHGID +G Y GDSDLQLER++V+YNEA+GGRYVPRA+LMDLEPGTMDSVR+GPFGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELID+VLDVVRKEAE CDCLQGFQ+ HSLGG Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGTYCGDSDLQLERVDVFYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDAVLDVVRKEAEGCDCLQGFQITHSLGG 141 HSP 2 Score: 142.124 bits (357), Expect = 8.255e-108 Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 3 Query: 453 GGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRT 674 GGTGSGMGTLLISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRT Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRT 214
BLAST of CF417871 vs. ExPASy Swiss-Prot
Match: TBB1_GLOMM (Tubulin beta-1 chain OS=Glossina morsitans morsitans PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.077e-107 Identity = 128/141 (90.78%), Postives = 135/141 (95.74%), Query Frame = 2 Query: 32 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 454 MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDSDLQLERINVYYNEASGG+YVPRAVL+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ HSLGG Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGG 141 HSP 2 Score: 134.42 bits (337), Expect = 1.077e-107 Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 3 Query: 453 GGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRT 674 GGTGSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRT Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 214
BLAST of CF417871 vs. ExPASy Swiss-Prot
Match: TBB1_DROME (Tubulin beta-1 chain OS=Drosophila melanogaster GN=betaTub56D PE=1 SV=2) HSP 1 Score: 275.789 bits (704), Expect = 1.077e-107 Identity = 128/141 (90.78%), Postives = 135/141 (95.74%), Query Frame = 2 Query: 32 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 454 MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDSDLQLERINVYYNEASGG+YVPRAVL+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ HSLGG Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGG 141 HSP 2 Score: 134.42 bits (337), Expect = 1.077e-107 Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 3 Query: 453 GGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRT 674 GGTGSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRT Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 214
BLAST of CF417871 vs. ExPASy Swiss-Prot
Match: TBB2_ECHMU (Tubulin beta-2 chain OS=Echinococcus multilocularis GN=TUB-2 PE=3 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 1.077e-107 Identity = 126/141 (89.36%), Postives = 135/141 (95.74%), Query Frame = 2 Query: 32 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 454 MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINVYYNEASGG+YVPRA+L+DLEPGTMDSVR+GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV+RKEAE+CDCLQGFQ+ HSLGG Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRAGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKEAESCDCLQGFQLTHSLGG 141 HSP 2 Score: 135.961 bits (341), Expect = 1.077e-107 Identity = 65/74 (87.84%), Postives = 69/74 (93.24%), Query Frame = 3 Query: 453 GGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRT 674 GGTGSGMGTLLISKIREEYPDR+M+T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRT Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 214
BLAST of CF417871 vs. ExPASy Swiss-Prot
Match: TBB1_MANSE (Tubulin beta-1 chain OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 1.405e-107 Identity = 127/141 (90.07%), Postives = 135/141 (95.74%), Query Frame = 2 Query: 32 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 454 MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDSDLQLERINVYYNEASGG+YVPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ HSLGG Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGG 141 HSP 2 Score: 134.42 bits (337), Expect = 1.405e-107 Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 3 Query: 453 GGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRT 674 GGTGSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRT Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 214
BLAST of CF417871 vs. ExPASy Swiss-Prot
Match: TBB4_XENLA (Tubulin beta-4 chain OS=Xenopus laevis GN=tubb4 PE=2 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 1.405e-107 Identity = 127/141 (90.07%), Postives = 135/141 (95.74%), Query Frame = 2 Query: 32 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 454 MREI+H+Q GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINVYYNEA+GG+YVPRAVL+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ HSLGG Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGG 141 HSP 2 Score: 135.576 bits (340), Expect = 1.405e-107 Identity = 66/74 (89.19%), Postives = 68/74 (91.89%), Query Frame = 3 Query: 453 GGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRT 674 GGTGSGMGTLLISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRT Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 214
BLAST of CF417871 vs. ExPASy Swiss-Prot
Match: TBB2C_RAT (Tubulin beta-2C chain OS=Rattus norvegicus GN=Tubb2c PE=1 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 1.405e-107 Identity = 127/141 (90.07%), Postives = 135/141 (95.74%), Query Frame = 2 Query: 32 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGG 454 MREI+H+Q GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINVYYNEA+GG+YVPRAVL+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ HSLGG Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGG 141 HSP 2 Score: 135.576 bits (340), Expect = 1.405e-107 Identity = 66/74 (89.19%), Postives = 68/74 (91.89%), Query Frame = 3 Query: 453 GGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRT 674 GGTGSGMGTLLISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRT Sbjct: 141 GGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 214 The following BLAST results are available for this feature:
BLAST of CF417871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 421
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417871 ID=CF417871; Name=CF417871; organism=Citrus sinensis; type=EST; length=676bpback to top |