CF417899

Overview
NameCF417899
Unique NameCF417899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.704e-34
Identity = 74/142 (52.11%), Postives = 92/142 (64.79%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLH---ASDVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+KL+H +LV L G    ++ E++LVYEY+ NG   DHL+ +  N   L W  RL I I  A  L YLH   A  +IHRDVKS NILLD     KVADFGLS+       HVSTA +G+ GY+DP+YF+  +LTDKSDVYSF
Sbjct:  573 LSKLRHRHLVSLIGYCD-ENAEMILVYEYMSNGPFRDHLYGK--NLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSF 711          

HSP 2 Score: 36.1946 bits (82), Expect = 1.704e-34
Identity = 17/48 (35.42%), Postives = 28/48 (58.33%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSL 558
            +FGVVL+E +    A++    R  +NL+  A+   Q G L +++DP L
Sbjct:  710 SFGVVLLEALCARPAINPQLPREQVNLAEWAMLWKQKGLLEKIIDPHL 757          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.708e-34
Identity = 73/142 (51.41%), Postives = 95/142 (66.90%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+++ H N+VK+ GC   ++   LLVYE+I +GT+ DHLH    +S L  W  RL IA E A +LAYLH+S    +IHRD+K+ NILLD N   KVADFG SRL P D   ++T  QGT GY+DP+Y+    L +KSDVYSF
Sbjct:  452 LSQINHRNVVKVLGCCL-ETEVPLLVYEFINSGTLFDHLHGSLYDSSLT-WEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSF 591          

HSP 2 Score: 31.187 bits (69), Expect = 1.708e-34
Identity = 16/45 (35.56%), Postives = 27/45 (60.00%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVD 549
            +FGVVL+EL+SG +A+   R     NL +   +  +N   +E++D
Sbjct:  590 SFGVVLMELLSGQKALCFERPHCPKNLVSCFASATKNNRFHEIID 634          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.219e-34
Identity = 74/142 (52.11%), Postives = 92/142 (64.79%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLH---ASDVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+KL+H +LV L G     S E++LVYE++ NG   DHL+ +  N   L W  RL I I +A  L YLH   A  +IHRDVKS NILLD     KVADFGLS+       HVSTA +G+ GY+DP+YF+  +LTDKSDVYSF
Sbjct:  574 LSKLRHRHLVSLIGYCDENS-EMILVYEFMSNGPFRDHLYGK--NLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSF 712          

HSP 2 Score: 35.8094 bits (81), Expect = 2.219e-34
Identity = 16/48 (33.33%), Postives = 28/48 (58.33%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSL 558
            +FGVVL+E +    A++    R  +NL+  A+   + G L +++DP L
Sbjct:  711 SFGVVLLEALCARPAINPQLPREQVNLAEWAMQWKRKGLLEKIIDPHL 758          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.223e-34
Identity = 73/145 (50.34%), Postives = 99/145 (68.28%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLH---ASDVIHRDVKSNNILLDNNFRVKVADFGLSRLFPT---DVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            +++L H NLV+L G     + E +LVYEY+ NG++ADHLHN Q +   L W  RL IA++ A  + YLH      VIHRD+KS+NILLD  +  KV+DFGLS++ PT   DV+H+S    GT GY+DP+Y++  +LT KSDVYSF
Sbjct:  503 MSRLNHKNLVRLLGFYE-DTEERILVYEYMKNGSLADHLHNPQFDP--LSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSF 644          

HSP 2 Score: 29.6462 bits (65), Expect = 2.223e-34
Identity = 18/68 (26.47%), Postives = 34/68 (50.00%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSLGFEKDYAVRNMVTSVAELGF 618
            +FGVVL+EL+SG +A+  +   +  NL    +  I     + ++D  +     Y +     +VA +G+
Sbjct:  643 SFGVVLLELLSGHKAIHNNEDENPRNLVEYVVPYILLDEAHRILDQRIPPPTPYEIE----AVAHVGY 706          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.655e-34
Identity = 68/142 (47.89%), Postives = 96/142 (67.61%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+++ H N+VKL GC   ++   +LVYEYIPNG +   LH+   +  ++ W VRL IA+E A AL+Y+H++    + HRD+K+ NILLD  +R K++DFG SR   TD TH++T   GT GY+DP+YF   + T KSDVYSF
Sbjct:  476 LSQINHRNIVKLLGCCL-ETEVPILVYEYIPNGDLFKRLHDEY-DDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSF 615          

HSP 2 Score: 28.8758 bits (63), Expect = 3.655e-34
Identity = 13/45 (28.89%), Postives = 25/45 (55.56%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVD 549
            +FGVVL+ELI+G + +   R    I L+   +  ++     +++D
Sbjct:  614 SFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIID 658          

HSP 3 Score: 20.7866 bits (42), Expect = 3.655e-34
Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  614 AFRCVQQDRDMRPTMKEV 667
            A RC+ +  + RP M+EV
Sbjct:  675 ARRCLNRKGNKRPNMREV 692          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.772e-34
Identity = 73/142 (51.41%), Postives = 95/142 (66.90%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+++ H N+VKL GC   ++   LLVYE+I +GT+ DHLH    +S L  W  RL +A+E A  LAYLH+S    +IHRD+K+ NILLD N   KVADFG SRL P D   ++T  QGT GY+DP+Y+    L +KSDVYSF
Sbjct:  458 LSQINHRNVVKLLGCCL-ETEVPLLVYEFISSGTLFDHLHGSMFDSSLT-WEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSF 597          

HSP 2 Score: 28.8758 bits (63), Expect = 3.772e-34
Identity = 14/45 (31.11%), Postives = 28/45 (62.22%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVD 549
            +FGVVL+EL+SG +A+   R +   ++ +   +  +   L+E++D
Sbjct:  596 SFGVVLMELLSGQKALCFERPQTSKHIVSYFASATKENRLHEIID 640          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.894e-34
Identity = 67/142 (47.18%), Postives = 90/142 (63.38%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHASD---VIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            ++ LQHPNLVKLYGC   + +ELLLVYEY+ N ++A  L   +     L W  R  I I  A  LAYLH      ++HRD+K+ N+LLD +   K++DFGL++L   + TH+ST   GT GY+ P+Y     LTDK+DVYSF
Sbjct:  717 ISALQHPNLVKLYGCCI-EGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSF 857          

HSP 2 Score: 35.039 bits (79), Expect = 4.894e-34
Identity = 22/59 (37.29%), Postives = 32/59 (54.24%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSLG--FEKDYAVR 585
            +FGVV +E++SG    +       + L + A    + G+L ELVDP LG  F K  A+R
Sbjct:  856 SFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMR 914          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.894e-34
Identity = 66/142 (46.48%), Postives = 90/142 (63.38%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHASD---VIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            ++ LQHPNLVKLYGC   + +ELLLVYEY+ N ++A  L   +     L W  R  + I  A  LAYLH      ++HRD+K+ N+LLD +   K++DFGL++L   + TH+ST   GT GY+ P+Y     LTDK+DVYSF
Sbjct:  715 ISALQHPNLVKLYGCCI-EGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSF 855          

HSP 2 Score: 35.4242 bits (80), Expect = 4.894e-34
Identity = 23/59 (38.98%), Postives = 32/59 (54.24%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSLG--FEKDYAVR 585
            +FGVV +E++SG    +       I L + A    + G+L ELVDP LG  F K  A+R
Sbjct:  854 SFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMR 912          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.912e-34
Identity = 72/142 (50.70%), Postives = 96/142 (67.61%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+++ H N+VKL GC   ++   +LVYE+IPNG +   LH+   +   + W VRL I++E A ALAYLH++    V HRDVK+ NILLD  +R KV+DFG SR    D TH++T   GT GY+DP+YFQ  + TDKSDVYSF
Sbjct:  469 LSQINHRNIVKLMGCCL-ETEVPILVYEHIPNGDLFKRLHH-DSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSF 608          

HSP 2 Score: 26.5646 bits (57), Expect = 4.912e-34
Identity = 18/66 (27.27%), Postives = 33/66 (50.00%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSLGFEKDYAVRNMVTSVAEL 612
            +FGVVL+ELI+G +     R   +  L +     ++   + ++VD  +   K+      V +VA+L
Sbjct:  607 SFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVLDIVDSRI---KEGCTLEQVLAVAKL 669          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.945e-34
Identity = 72/142 (50.70%), Postives = 94/142 (66.20%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+++ H N+VKL GC   ++   LLVYE+I  G++ DHLH     S L  W  RL IAIE A A+AYLH+     +IHRD+K+ NILLD N   KVADFG S+L P D   ++T  QGT GY+DP+Y+  + L +KSDVYSF
Sbjct:  156 LSQINHRNVVKLLGCCL-ETEVPLLVYEFITGGSLFDHLHGSMFVSSLT-WEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSF 295          

HSP 2 Score: 30.0314 bits (66), Expect = 4.945e-34
Identity = 16/45 (35.56%), Postives = 27/45 (60.00%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVD 549
            +FGVVL+ELISG +A+   R     +L +  +   +   L+E++D
Sbjct:  294 SFGVVLMELISGQKALCFERPETSKHLVSYFVLATKENRLHEIID 338          
The following BLAST results are available for this feature:
BLAST of CF417899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2214_ARATH1.704e-3452.11Probable receptor-like protein kinase At2g21480 OS... [more]
WAK2_ARATH1.708e-3451.41Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
Y4391_ARATH2.219e-3452.11Probable receptor-like protein kinase At4g39110 OS... [more]
ACCR4_ARATH2.223e-3450.34Serine/threonine-protein kinase-like protein CCR4 ... [more]
WAKLC_ARATH3.655e-3447.89Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
WAK4_ARATH3.772e-3451.41Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
Y5343_ARATH4.894e-3447.18Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH4.894e-3446.48Probable LRR receptor-like serine/threonine-protei... [more]
WAKLI_ARATH4.912e-3450.70Wall-associated receptor kinase-like 22 OS=Arabido... [more]
WAKLS_ARATH4.945e-3450.70Putative wall-associated receptor kinase-like 16 O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-829 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417899 ID=CF417899; Name=CF417899; organism=Citrus sinensis; type=EST; length=690bp
TTCTTACAAAGTTGCAGCATCCAAACCTTGTGAAATTATACGGATGCACA
TCAAGACAAAGCCGGGAGCTGCTCCTGGTTTATGAGTACATTCCCAATGG
AACAGTAGCAGATCATCTTCACAACAGGCAGCCGAACTCTTGCTTGCTCC
CTTGGCCTGTTCGTTTGAGCATTGCCATTGAAACAGCTGATGCACTTGCT
TACCTACATGCTTCAGATGTCATTCACCGCGATGTCAAATCCAACAACAT
TCTCTTGGACAACAATTTCCGTGTAAAGGTTGCAGATTTTGGGCTATCAA
GATTGTTTCCAACTGATGTTACACATGTCTCCACAGCTCCACAGGGGACC
CCTGGCTACGTTGATCCTGATTATTTCCAGTGCTACAAGCTCACTGACAA
GAGTGACGTGTACAGCTTTTGGGGTTGTTCTAATTGAGCTCATCTCAGGG
TTACAAGCTGTGGACACTAGTAGGCACCGGCATGATATAAACTTGTCTAA
CATGGCAATTAACAAGATTCAGAATGGCGCATTGAACGAGCTTGTTGATC
CATCTCTGGGGTTTGAAAAGGATTATGCAGTGAGAAACATGGTGACTTCA
GTGGCAGAATTGGGCTTTCAGGTGCGTGCAACAAGACAGAGACATGAGGC
CTACAATGAAAGAAGTGTTGGAGATTTTGAGGGAGACCAA
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