CF417899

Overview
NameCF417899
Unique NameCF417899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.046e-28
Identity = 64/146 (43.84%), Postives = 90/146 (61.64%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYG-CTSR---QSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            +  ++H NL+ L G CT+    +  + ++V + + NG++ DHL         L WP+R  IA+  A  LAYLH      +IHRD+K++NILLD  F  KVADFGL++  P  +TH+ST   GT GYV P+Y    +LT+KSDVYSF
Sbjct:  331 IASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDL--EAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSF 474          

HSP 2 Score: 30.0314 bits (66), Expect = 2.046e-28
Identity = 13/48 (27.08%), Postives = 30/48 (62.50%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSL 558
            +FGVVL+EL+S  +A+ T      +++++ A + ++ G   ++V+  +
Sbjct:  473 SFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGM 520          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.058e-28
Identity = 70/140 (50.00%), Postives = 89/140 (63.57%), Query Frame = 3
Query:   12 LQHPNLVKLYGCTSRQSR---ELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHASDVIHRDVKSNNILLDNNFRVKVADFGLSRLFPT-DVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            + HPN+VKL G  S       E LLVYEY+ N ++ DHL  R+ ++  LPW  RL I +  A+ L YLH   VI+RD KS+N+LLD+ F  K++DFGL+R  P  D THV+TA  GT GY  P+Y Q   L  KSDVYSF
Sbjct:  144 VNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSHT--LPWKKRLEIMLGAAEGLTYLHDLKVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSF 281          

HSP 2 Score: 23.0978 bits (48), Expect = 2.058e-28
Identity = 8/20 (40.00%), Postives = 16/20 (80.00%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSR 474
            +FGVVL E+I+G + ++ ++
Sbjct:  280 SFGVVLYEIITGRRTIERNK 299          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.059e-28
Identity = 65/143 (45.45%), Postives = 94/143 (65.73%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYG-CTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS--DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPT-DVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L +L HPNLVKL G C   + R  LLVYE++  G++ +HL  R      LPW +R+++A++ A  LA+LH+    VI+RD+K++NILLD ++  K++DFGL+R  P  D+++VST   GT GY  P+Y     L  +SDVYSF
Sbjct:  125 LGQLSHPNLVKLIGYCLEDEHR--LLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSF 265          

HSP 2 Score: 29.261 bits (64), Expect = 2.059e-28
Identity = 13/31 (41.94%), Postives = 23/31 (74.19%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMA 507
            +FGV+L+E++SG +A+D +R   + NL + A
Sbjct:  264 SFGVLLLEILSGKRALDHNRPAKEENLVDWA 294          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.262e-28
Identity = 63/143 (44.06%), Postives = 91/143 (63.64%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYG-CTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLH---ASDVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L  ++H  LV L G C S  S+  LL+Y+Y+P G++ + LH R      L W  R++I I  A  LAYLH   +  +IHRD+KS+NILLD N   +V+DFGL++L   + +H++T   GT GY+ P+Y Q  + T+K+DVYSF
Sbjct:  352 LGSIKHRYLVNLRGYCNSPTSK--LLLYDYLPGGSLDEALHKRGEQ---LDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSF 489          

HSP 2 Score: 25.0238 bits (53), Expect = 2.262e-28
Identity = 16/54 (29.63%), Postives = 26/54 (48.15%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSL-GFEKD 573
            +FGV+++E++SG    D S      N+       I      E+VD S  G E++
Sbjct:  488 SFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLSCEGVERE 541          

HSP 3 Score: 25.0238 bits (53), Expect = 2.262e-28
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 2
Query:  614 AFRCVQQDRDMRPTMKEVLEIL 679
            A +CV    D RPTM  V+++L
Sbjct:  550 ATKCVSSSPDERPTMHRVVQLL 571          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.684e-28
Identity = 57/144 (39.58%), Postives = 89/144 (61.81%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQP--NSCLLPWPVRLSIAIETADALAYLHASD--VIHRDVKSNNILLDNNFRVKVADFGLS-RLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L++++ P  V L G ++  S+E LLV E++ NG++ D +H+     +  +  W  R+ IA++ A A+  LH+ +  +IHRD+KS N+L+D N   K+ DFGL+ R    D    ST P GT GY+DPDY    +L+ K+DV+SF
Sbjct:  105 LSRIRSPRFVNLLGFSADNSKEPLLVVEFMGNGSLYDVIHSDTVLNSGAISSWSKRIKIALQIAKAVHLLHSQETPIIHRDIKSANVLMDKNLNAKLGDFGLAIRCNVDDQKVKSTPPAGTMGYLDPDYVTADRLSTKTDVFSF 248          

HSP 2 Score: 38.891 bits (89), Expect = 2.684e-28
Identity = 27/82 (32.93%), Postives = 45/82 (54.88%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSLGFEKDYAVRNMVTSVAELGFQVRATRQRHEAYNE 660
            +FG++L+E+ISG +A+D  R+     + + AI  I+ G +  + DP +G   D +VRN +  VA     VR  R++     E
Sbjct:  247 SFGILLLEIISGRKAIDV-RYSPSF-IVDWAIPMIKRGKIGGIYDPRIGPPIDVSVRNHLGLVA--AKCVRTCREKRPGMEE 324          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28
Identity = 67/143 (46.85%), Postives = 90/143 (62.94%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHASDV---IHRDVKSNNILLDNNFRVKVADFGLSRLFPT-DVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L ++ H NLV L G    +   L L+YEY+PNG +  HL  +     +L W  RL I ++ A  L YLH   V   +HRD+K+ NILLD + + K+ADFGLSR FP  +  +VST   GTPGY+DP+Y+Q   LT+KSD+YSF
Sbjct:  625 LMRVHHINLVSLVGYCD-EGEHLALIYEYMPNGDLKQHLSGKH-GGFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSF 765          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.309e-28
Identity = 69/143 (48.25%), Postives = 91/143 (63.64%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTD-VTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L ++ H NLV L G    +   L L+YEY+ NG + +H+   + N  +L W  RL I IE+A  L YLH      ++HRDVK+ NILL+ +F  K+ADFGLSR F  +  THVST   GTPGY+DP+Y +   LT+KSDVYSF
Sbjct:  626 LLRVHHKNLVGLVGYCD-EGDNLALIYEYMANGDLKEHMSGTR-NRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSF 766          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.628e-28
Identity = 65/141 (46.10%), Postives = 91/141 (64.54%), Query Frame = 3
Query:    9 KLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAP-QGTPGYVDPDYFQCYKLTDKSDVYSF 419
            K++H NLV L G   +   E LLVYEY+  G++ D LH+R+     L WP R  IAI  A  LA+LH +    +IHRD+KS+N+LLD N   +V+DFG++RL     TH+S +   GTPGYV P+Y+Q ++ + K DVYS+
Sbjct:  938 KIKHRNLVPLLGYC-KVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSY 1077          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.082e-27
Identity = 62/143 (43.36%), Postives = 91/143 (63.64%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYG-CTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLH---ASDVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L  ++H  LV L G C S  S+  LL+Y+Y+P G++ + LH R      L W  R++I I  A  L+YLH   +  +IHRD+KS+NILLD N   +V+DFGL++L   + +H++T   GT GY+ P+Y Q  + T+K+DVYSF
Sbjct:  354 LGSIKHRYLVNLRGYCNSPTSK--LLLYDYLPGGSLDEALHERGEQ---LDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSF 491          

HSP 2 Score: 26.1794 bits (56), Expect = 1.082e-27
Identity = 13/47 (27.66%), Postives = 25/47 (53.19%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPS 555
            +FGV+++E++SG +  D S     +N+       I      ++VDP+
Sbjct:  490 SFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPN 536          

HSP 3 Score: 22.7126 bits (47), Expect = 1.082e-27
Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = 2
Query:  614 AFRCVQQDRDMRPTMKEVLEIL 679
            A +CV    + RPTM  V+++L
Sbjct:  552 ATQCVSPSPEERPTMHRVVQLL 573          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.254e-27
Identity = 70/144 (48.61%), Postives = 88/144 (61.11%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPT--DVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L ++ H NLV L G    Q     L+YEY+ NG +  HL  +   S +L W  RL IAIE A  L YLH      ++HRDVKS NILLD  F+ K+ADFGLSR F    D + VST   GT GY+DP+Y+   +L++KSDVYSF
Sbjct:  614 LLRVHHINLVNLVGYCDEQDH-FALIYEYMSNGDLHQHLSGKHGGS-VLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSF 755          
The following BLAST results are available for this feature:
BLAST of CF417899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RKF3_ARATH2.046e-2843.84Probable LRR receptor-like serine/threonine-protei... [more]
Y5707_ARATH2.058e-2850.00Probable receptor-like protein kinase At5g47070 OS... [more]
BIK1_ARATH2.059e-2845.45Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
FEI2_ARATH2.262e-2844.06LRR receptor-like serine/threonine-protein kinase ... [more]
CCR35_ARATH2.684e-2839.58Serine/threonine-protein kinase-like protein At3g5... [more]
Y2899_ARATH3.300e-2846.85Probable leucine-rich repeat receptor-like protein... [more]
Y5182_ARATH4.309e-2848.25Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_SOLPE5.628e-2846.10Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
FEI1_ARATH1.082e-2743.36LRR receptor-like serine/threonine-protein kinase ... [more]
MEE39_ARATH1.254e-2748.61Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-829 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417899 ID=CF417899; Name=CF417899; organism=Citrus sinensis; type=EST; length=690bp
TTCTTACAAAGTTGCAGCATCCAAACCTTGTGAAATTATACGGATGCACA
TCAAGACAAAGCCGGGAGCTGCTCCTGGTTTATGAGTACATTCCCAATGG
AACAGTAGCAGATCATCTTCACAACAGGCAGCCGAACTCTTGCTTGCTCC
CTTGGCCTGTTCGTTTGAGCATTGCCATTGAAACAGCTGATGCACTTGCT
TACCTACATGCTTCAGATGTCATTCACCGCGATGTCAAATCCAACAACAT
TCTCTTGGACAACAATTTCCGTGTAAAGGTTGCAGATTTTGGGCTATCAA
GATTGTTTCCAACTGATGTTACACATGTCTCCACAGCTCCACAGGGGACC
CCTGGCTACGTTGATCCTGATTATTTCCAGTGCTACAAGCTCACTGACAA
GAGTGACGTGTACAGCTTTTGGGGTTGTTCTAATTGAGCTCATCTCAGGG
TTACAAGCTGTGGACACTAGTAGGCACCGGCATGATATAAACTTGTCTAA
CATGGCAATTAACAAGATTCAGAATGGCGCATTGAACGAGCTTGTTGATC
CATCTCTGGGGTTTGAAAAGGATTATGCAGTGAGAAACATGGTGACTTCA
GTGGCAGAATTGGGCTTTCAGGTGCGTGCAACAAGACAGAGACATGAGGC
CTACAATGAAAGAAGTGTTGGAGATTTTGAGGGAGACCAA
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