CF417904
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB1_RHOS1 (ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=atpD1 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 4.807e-42 Identity = 84/111 (75.68%), Postives = 93/111 (83.78%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 EGLVRG RV +TGSPI+VPVG TLGRI+NVIGEPIDEKGDL IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 63 EGLVRGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEASTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVH 173
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_YEAST (ATP synthase subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=ATP2 PE=1 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 6.279e-42 Identity = 82/111 (73.87%), Postives = 96/111 (86.49%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 EGLVRG++VL+TG PI+VPVGR TLGRI+NVIGEPIDE+G +K++ PIH + P+F EQ+T +IL TGIKVVDLLAPY RGGKIGLFGGAGVGKTV I ELINN+AKAH Sbjct: 101 EGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAH 211
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPB (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB18) GN=atpD PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 6.279e-42 Identity = 84/111 (75.68%), Postives = 94/111 (84.68%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 EGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAH Sbjct: 65 EGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAH 175
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_RHOP2 (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain HaA2) GN=atpD PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 6.279e-42 Identity = 84/111 (75.68%), Postives = 94/111 (84.68%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 EGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAH Sbjct: 65 EGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAH 175
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_PARL1 (ATP synthase subunit beta OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=atpD PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 6.279e-42 Identity = 85/111 (76.58%), Postives = 95/111 (85.59%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 EGL RGQ V +TG+ ITVPVG TLGRI+NVIGEP+DE G +K E IH+EAP+FVEQ+TE Q+LVTGIKVVDLLAPY RGGKIGLFGGAGVGKTVLI ELINN+AKAH Sbjct: 62 EGLTRGQEVRDTGNAITVPVGEGTLGRIINVIGEPVDEAGPVKHEARREIHQEAPSFVEQSTEAQMLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINNIAKAH 172
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_SCHPO (ATP synthase subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=atp2 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 8.200e-42 Identity = 82/111 (73.87%), Postives = 94/111 (84.68%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 EGLVRG V++TGSPI++PVG TLGRIMNVIGEP+DE+G +K Y PIH +AP+F EQ+T +IL TGIKVVDLLAPY RGGKIGLFGGAGVGKTV I ELINN+AKAH Sbjct: 114 EGLVRGTAVIDTGSPISIPVGPGTLGRIMNVIGEPVDERGPIKAVKYSPIHADAPSFEEQSTTPEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAH 224
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_RICFE (ATP synthase subunit beta OS=Rickettsia felis GN=atpD PE=3 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 8.200e-42 Identity = 83/111 (74.77%), Postives = 95/111 (85.59%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 EGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 64 EGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKSAPDFTNQSTERNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_NITHX (ATP synthase subunit beta OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=atpD PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 8.200e-42 Identity = 84/111 (75.68%), Postives = 95/111 (85.59%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 EGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G +K E IH+EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAH Sbjct: 65 EGLVRGQEVKDTGNPILVPVGVGTLGRIMNVIGEPVDEQGPVKAEDMRAIHQEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAH 175
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_BRUSU (ATP synthase subunit beta OS=Brucella suis GN=atpD PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 8.200e-42 Identity = 84/111 (75.68%), Postives = 94/111 (84.68%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 EGLVRGQ +TG PI VPVG TLGRIMNVIGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 110 EGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 220
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_BRUSI (ATP synthase subunit beta OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=atpD PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 8.200e-42 Identity = 84/111 (75.68%), Postives = 94/111 (84.68%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 EGLVRGQ +TG PI VPVG TLGRIMNVIGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 110 EGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 220 The following BLAST results are available for this feature:
BLAST of CF417904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417904 ID=CF417904; Name=CF417904; organism=Citrus sinensis; type=EST; length=336bpback to top |