CF417904
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_BACV8 (ATP synthase subunit beta OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=atpD PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.709e-35 Identity = 71/111 (63.96%), Postives = 83/111 (74.77%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 +GL RG V+ TG PIT+PVG GR+MNV+GE +D L E PIHRE P F E +T Q++L TGIKV+DLL PY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 70 DGLQRGMEVIPTGHPITMPVGNQIKGRLMNVVGEAVDGMRPLSKEGAFPIHREPPKFDELSTVQEVLFTGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELINNIAKKH 180
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_ACTSZ (ATP synthase subunit beta OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=atpD PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.709e-35 Identity = 68/111 (61.26%), Postives = 88/111 (79.28%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 +GL RG V NTG+PI+VPVG TLGRIMNV+GEPID+KG++ E IHREAP++ +Q+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 59 DGLKRGLAVKNTGNPISVPVGTKTLGRIMNVLGEPIDQKGEIGAEETWAIHREAPSYEDQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 169
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_THEYD (ATP synthase subunit beta OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=atpD PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.268e-34 Identity = 67/111 (60.36%), Postives = 87/111 (78.38%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 +GLVRG +V++TG+PITVPVG+ LGRI+NVIGEP+DE G ++ + PIH AP F EQ+ Q TG+KV DLL P+ RGGK+G+FGGAGVGKTV+IME+I+N+A H Sbjct: 68 DGLVRGMKVVDTGAPITVPVGKPVLGRIINVIGEPVDEMGPIQAQDKYPIHISAPEFTEQSPTTQQFETGVKVFDLLVPFVRGGKMGMFGGAGVGKTVIIMEMIHNIAMKH 178
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_SULNB (ATP synthase subunit beta OS=Sulfurovum sp. (strain NBC37-1) GN=atpD PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.268e-34 Identity = 71/111 (63.96%), Postives = 85/111 (76.58%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 EG+VRGQ V TG I VPVG LGRI NVIGE IDE G ++ + + IHR+ P F +Q+T+ ++ TGIKVVDLLAPY +GGK+GLFGGAGVGKTV+IMELINNVA H Sbjct: 63 EGVVRGQEVKATGDSIQVPVGEEVLGRIFNVIGEAIDEAGPVEAKTHWSIHRDPPPFEDQSTKTEVFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVIIMELINNVAMKH 173
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_BACCR (ATP synthase subunit beta OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=atpD PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.268e-34 Identity = 74/112 (66.07%), Postives = 89/112 (79.46%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 +GLVRG V +TG I+VPVG TLGR+ NV+G+ ID G+L + H PIHR+APAF E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINN+A+ H Sbjct: 65 DGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGELPADVHRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEH 176
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_BACCN (ATP synthase subunit beta OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=atpD PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.268e-34 Identity = 74/112 (66.07%), Postives = 89/112 (79.46%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 +GLVRG V +TG PI+VPVG TLGR+ NV+GE ID G++ + PIHR+APAF E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINN+A+ H Sbjct: 61 DGLVRGTEVEDTGRPISVPVGDATLGRVFNVLGEAIDLDGEIPADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEH 172
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_BACC4 (ATP synthase subunit beta OS=Bacillus cereus (strain B4264) GN=atpD PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.268e-34 Identity = 74/112 (66.07%), Postives = 89/112 (79.46%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 +GLVRG V +TG I+VPVG TLGR+ NV+G+ ID G+L + H PIHR+APAF E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINN+A+ H Sbjct: 65 DGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGELPADVHRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEH 176
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_ALHEH (ATP synthase subunit beta OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=atpD PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.268e-34 Identity = 69/111 (62.16%), Postives = 88/111 (79.28%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 +GL R ++V TG PI+VPVG+ TLGRIM+V+GEP+DEKG ++TE IHR AP+F EQA ++L TGIKV+DLL P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 59 DGLKRSEKVSATGKPISVPVGKGTLGRIMDVLGEPVDEKGAVETEERWGIHRSAPSFAEQAGGAELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEH 169
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_VIBAL (ATP synthase subunit beta OS=Vibrio alginolyticus GN=atpD PE=1 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 1.656e-34 Identity = 68/111 (61.26%), Postives = 88/111 (79.28%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 +GL RG V+NTG+PI+VPVG TLGRIMNV+G+ IDE+G++ E IHR AP++ EQ+ E +L TG+KV+DL+ P+ +GGKIGLFGGAGVGKTV +MELINN+A H Sbjct: 61 DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEVGAEEVYSIHRSAPSYEEQSNEIALLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQH 171
BLAST of CF417904 vs. ExPASy Swiss-Prot
Match: ATPB_NEIG2 (ATP synthase subunit beta OS=Neisseria gonorrhoeae (strain NCCP11945) GN=atpD PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.656e-34 Identity = 69/111 (62.16%), Postives = 88/111 (79.28%), Query Frame = 2 Query: 2 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 334 +GL RG V NTGSPITVPVG+ TLGRI++V+G P+DE G + T+ IH+ AP F E ++ ++L TGIKV+DLL P+ +GGK+GLFGGAGVGKTV +MELINN+AKAH Sbjct: 59 DGLKRGMTVSNTGSPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAH 169 The following BLAST results are available for this feature:
BLAST of CF417904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417904 ID=CF417904; Name=CF417904; organism=Citrus sinensis; type=EST; length=336bpback to top |