CF417915

Overview
NameCF417915
Unique NameCF417915
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TSA1_CANAL (Peroxiredoxin TSA1 OS=Candida albicans GN=TSA1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.073e-28
Identity = 54/119 (45.38%), Postives = 74/119 (62.18%), Query Frame = 2
Query:  242 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSG 598
            P+V   AP F   AV D  F  V L  Y GK +V+L F PL FTFVCP+EI A+S+   +F + + ++L  STDS ++ LAW    RK GG+G + +P++AD   S+S+ YGVLI   G
Sbjct:    3 PVVQQPAPSFKKTAVVDGVFEEVTLEQYKGK-WVLLAFIPLAFTFVCPSEIIAYSEAVKKFAEKDAQVLFASTDSEYTWLAWTNVARKDGGIGKVDFPVLADTNHSLSRDYGVLIEEEG 120          

HSP 2 Score: 35.8094 bits (81), Expect = 1.073e-28
Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 1
Query:  622 LLTKKGVIQHSTINNLAIGRSVDETLRTL 708
            L+  KGV++  TIN+L +GRSV+E+LR L
Sbjct:  128 LIDPKGVLRQITINDLPVGRSVEESLRLL 156          

HSP 3 Score: 24.6386 bits (52), Expect = 1.073e-28
Identity = 8/13 (61.54%), Postives = 13/13 (100.00%), Query Frame = 3
Query:  591 DQGIALRGLFIID 629
            ++G+ALRG+F+ID
Sbjct:  118 EEGVALRGIFLID 130          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TSAA_HELPJ (Probable peroxiredoxin OS=Helicobacter pylori J99 GN=tsaA PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.804e-27
Identity = 57/115 (49.57%), Postives = 73/115 (63.48%), Query Frame = 2
Query:  245 LVGNTAPDFAAEAVFDQEFIN--VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 583
            LV   APDF A AV     ++   +LS  +GK  VILFF+P DFTFVCPTEI AF  R  +F +    ++GVS DS   H AW  T  + GG+G + +P++ADITKSIS+ Y VL
Sbjct:    2 LVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVL 116          

HSP 2 Score: 30.0314 bits (66), Expect = 3.804e-27
Identity = 12/29 (41.38%), Postives = 20/29 (68.97%), Query Frame = 1
Query:  616 SLLLTKKGVIQHSTINNLAIGRSVDETLR 702
            + L+ K   ++H+ IN+L +GR+ DE LR
Sbjct:  126 AFLIDKNMKVRHAVINDLPLGRNADEMLR 154          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TSAA_HELPY (Probable peroxiredoxin OS=Helicobacter pylori GN=tsaA PE=1 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 8.393e-27
Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = 2
Query:  245 LVGNTAPDFAAEAVFDQEFIN--VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 583
            LV   APDF A AV     ++   +LS  +GK   ILFF+P DFTFVCPTEI AF  R  +F++    ++GVS DS   H AW  T  + GG+G + +P++ADITKSIS+ Y VL
Sbjct:    2 LVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGAILFFWPKDFTFVCPTEIIAFDKRVKDFQEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVTFPMVADITKSISRDYDVL 116          

HSP 2 Score: 30.0314 bits (66), Expect = 8.393e-27
Identity = 12/29 (41.38%), Postives = 20/29 (68.97%), Query Frame = 1
Query:  616 SLLLTKKGVIQHSTINNLAIGRSVDETLR 702
            + L+ K   ++H+ IN+L +GR+ DE LR
Sbjct:  126 AFLIDKNMKVRHAVINDLPLGRNADEMLR 154          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TSAA_BUCAP (Probable peroxiredoxin OS=Buchnera aphidicola subsp. Schizaphis graminum GN=BUsg_176 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.137e-26
Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 2
Query:  245 LVGNTAPDFAAEAVFDQEFI--NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIP 589
            LV   AP+F A A+     I  N  L  Y   +  +LFF+P+DFTFVCP+EI  F+  +  FEK N +I+GVS DSVF H AW  T  ++GG+G +K+P+++DI   I KSY +  P
Sbjct:    3 LVTQKAPNFIAPAILKNGKIMNNFDLKKYSNGQITVLFFWPMDFTFVCPSEIIEFNKTFEAFEKRNVKIVGVSIDSVFVHQAWQNTFPENGGIGKIKFPMVSDIKHEIQKSYHIEHP 119          

HSP 2 Score: 31.5722 bits (70), Expect = 3.137e-26
Identity = 11/31 (35.48%), Postives = 21/31 (67.74%), Query Frame = 1
Query:  616 SLLLTKKGVIQHSTINNLAIGRSVDETLRTL 708
            S L+ +  +I+H  +N+L  GR++DE +R +
Sbjct:  128 SFLIDENWIIRHQVVNDLPFGRNIDEMIRMI 158          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: CR29_ENTHI (Putative peroxiredoxin OS=Entamoeba histolytica PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.978e-25
Identity = 51/113 (45.13%), Postives = 77/113 (68.14%), Query Frame = 2
Query:  248 VGNTAPDFAAEAVFDQEFIN-VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 583
            +G  AP+F A A      I  + +++Y GK YV+L FYPLD+TFVCPTE+  +S+   + +++N E++GVS DSV+ H AW + D+  GG+G L +PL++DI + IS  YG+L
Sbjct:   43 IGKEAPEFKAPAYCPCGSIKEIDINEYRGK-YVVLLFYPLDWTFVCPTEMIGYSELAGQLKEINCEVIGVSVDSVYCHQAWCEADKSKGGVGKLTFPLVSDIKRCISIKYGML 154          

HSP 2 Score: 26.5646 bits (57), Expect = 1.978e-25
Identity = 10/28 (35.71%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  619 LLLTKKGVIQHSTINNLAIGRSVDETLR 702
            +++  KG +++  +N+  IGRS +ET+R
Sbjct:  166 VIIDDKGKVRYIQMNDDGIGRSTEETIR 193          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TSAA_BUCAI (Probable peroxiredoxin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=BU182 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.987e-25
Identity = 52/120 (43.33%), Postives = 75/120 (62.50%), Query Frame = 2
Query:  245 LVGNTAPDFAAEAVFDQEFI--NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSG 598
            LV   AP+F A A+     I     L  Y   +  +LFF+P+DFTFVCP+EI  F+  ++EF+K N +I+GVS DSV+ H AW  T  K+GG+G + +P+++D+   I KSYG+  P  G
Sbjct:    3 LVTQNAPNFIAPAILKNNQIVEQFDLKKYSNGQSTVLFFWPMDFTFVCPSEIIEFNKLHSEFKKRNVKIVGVSIDSVYVHQAWQNTLPKNGGIGKINFPMVSDVKHDIQKSYGIQHPNLG 122          

HSP 2 Score: 26.9498 bits (58), Expect = 1.987e-25
Identity = 9/29 (31.03%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  616 SLLLTKKGVIQHSTINNLAIGRSVDETLR 702
            S L+    +I+H  +N+L  GR++ + +R
Sbjct:  128 SFLIDSNWIIRHQVVNDLPFGRNITDMIR 156          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TSAA_BUCBP (Probable peroxiredoxin OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=bbp_171 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.635e-24
Identity = 48/126 (38.10%), Postives = 75/126 (59.52%), Query Frame = 2
Query:  245 LVGNTAPDFAAEAVFDQEFI--NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERT 616
            LV   APDF A A+     I  N    ++   +  ILFF+P+DFTFVCP+EI AF+   ++F+K N +++GVS DSV+ H AW  T   +G +  + + +++D+ + I +SYG+  P  G  +  T
Sbjct:    3 LVTYPAPDFTASAISCNGDIINNFNFKEFTNNQTSILFFWPMDFTFVCPSEIIAFNQELSKFKKRNVKLIGVSIDSVYVHHAWRNTLSHNGQIDKINFTMVSDLKREIQRSYGIEHPQLGVALRAT 128          

HSP 2 Score: 35.039 bits (79), Expect = 1.635e-24
Identity = 14/31 (45.16%), Postives = 22/31 (70.97%), Query Frame = 1
Query:  616 SLLLTKKGVIQHSTINNLAIGRSVDETLRTL 708
            + L+ K  +I+H TIN+L  GR++ ETLR +
Sbjct:  128 TFLIDKNRIIRHQTINDLPFGRNISETLRMI 158          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: PRXU_EUBAC (Selenocysteine-containing peroxiredoxin prxU OS=Eubacterium acidaminophilum GN=prxU PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.169e-22
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 2
Query:  248 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSG 598
            VG  APDF     +  EF   +LS+Y+GK +V+L FYP DFTFV  TE++A +++Y EF+KL  E+L VS DSVF H  W   +      G + +P+++D   ++   YGV  P +G
Sbjct:    4 VGKKAPDFEMAGFYKGEFKTFRLSEYLGK-WVVLCFYPGDFTFVUATEVSAVAEKYPEFQKLGVEVLSVSVDSVFVHKMWNDNELSKMVEGGIPFPMLSDGGGNVGTLYGVYDPEAG 119          

HSP 2 Score: 25.7942 bits (55), Expect = 3.169e-22
Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  622 LLTKKGVIQHSTINNLAIGRSVDETLRTL 708
            L+   G+IQ   +  L +GR+V ETLR +
Sbjct:  127 LIDPDGIIQGYEVLILPVGRNVSETLRQI 155          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDX_ENCCU (Putative thioredoxin peroxidase OS=Encephalitozoon cuniculi GN=ECU03_1190 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.543e-21
Identity = 48/121 (39.67%), Postives = 69/121 (57.02%), Query Frame = 2
Query:  257 TAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTL 619
            T  D   +A  D E   + L DYIGK YV+L FYPLDFTFVCPTEI  FSD    F + N  +L +S DSV++H AW    R+  G+    +P++ D  + +   +G+    +G+ +  T+
Sbjct:    5 TLTDSKYKAFVDGEIKEISLQDYIGK-YVVLAFYPLDFTFVCPTEINRFSDLKGAFLRRNAVVLLISCDSVYTHKAWASIPREQNGVLGTAWPMVWDAKRELCNQFGLYDEENGHPMRSTV 124          

HSP 2 Score: 28.1054 bits (61), Expect = 1.543e-21
Identity = 13/31 (41.94%), Postives = 21/31 (67.74%), Query Frame = 1
Query:  616 SLLLTKKGVIQHSTINNLAIGRSVDETLRTL 708
            +++L K   ++H + N  AIGRSVDE +R +
Sbjct:  123 TVILAKDLSVRHISSNYHAIGRSVDEIIRLI 153          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_THEVO (Probable peroxiredoxin OS=Thermoplasma volcanium GN=TV1123 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.008e-21
Identity = 51/121 (42.15%), Postives = 80/121 (66.12%), Query Frame = 2
Query:  236 IPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSG 598
            +P ++G  APDF            + LS+Y GK +V+LF +P DFT VC TE  AF++RY +F+KL  E++G+S DSVFSH+AW++  ++  G+ D+ +P+IADI K +++ Y ++   SG
Sbjct:    1 MPVVLGQKAPDFTVNTSKGP----ITLSNYRGK-WVLLFSHPGDFTPVCTTEFIAFTERYEDFQKLGVELIGLSIDSVFSHIAWIRDIKEHFGI-DIPFPIIADIDKEVAREYNLIDEKSG 115          
The following BLAST results are available for this feature:
BLAST of CF417915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
TSA1_CANAL1.073e-2845.38Peroxiredoxin TSA1 OS=Candida albicans GN=TSA1 PE=... [more]
TSAA_HELPJ3.804e-2749.57Probable peroxiredoxin OS=Helicobacter pylori J99 ... [more]
TSAA_HELPY8.393e-2748.70Probable peroxiredoxin OS=Helicobacter pylori GN=t... [more]
TSAA_BUCAP3.137e-2645.30Probable peroxiredoxin OS=Buchnera aphidicola subs... [more]
CR29_ENTHI1.978e-2545.13Putative peroxiredoxin OS=Entamoeba histolytica PE... [more]
TSAA_BUCAI1.987e-2543.33Probable peroxiredoxin OS=Buchnera aphidicola subs... [more]
TSAA_BUCBP1.635e-2438.10Probable peroxiredoxin OS=Buchnera aphidicola subs... [more]
PRXU_EUBAC3.169e-2241.88Selenocysteine-containing peroxiredoxin prxU OS=Eu... [more]
TDX_ENCCU1.543e-2139.67Putative thioredoxin peroxidase OS=Encephalitozoon... [more]
TDXH_THEVO7.008e-2142.15Probable peroxiredoxin OS=Thermoplasma volcanium G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-845 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417915 ID=CF417915; Name=CF417915; organism=Citrus sinensis; type=EST; length=708bp
AACAAAAACAATGGCTTGCTCAGCTGCTTCTGCTGCTGCCACGGCAACAG
CCGCTCTCATTTCCTCTAACCCCAAGGCTTTCTCTTCTTCCTCAATCTCC
CCTTCTCAAAACCTAACCATTCCCCGCTCCTTCTCCGGCCTCCGCAATCC
CCTCCAGTCCCAGGTCCCCCGCCCCGTTTCTCTTTCCCGCGGGTCCCGTT
CTCGCAAGTCCTTCGTTGTCAAAGCATCCGTTGAAATACCACCATTGGTG
GGCAACACGGCACCTGATTTTGCTGCAGAGGCTGTTTTCGATCAAGAGTT
CATCAATGTCAAGCTTTCGGATTACATTGGGAAGAAATATGTGATTCTCT
TTTTCTACCCGTTGGACTTCACATTTGTTTGCCCCACAGAAATCACTGCT
TTCAGCGACCGATATACTGAATTTGAGAAGCTAAACACAGAGATATTGGG
TGTCTCAACCGACAGTGTGTTTTCACACTTGGCATGGGTCCAAACAGACA
GAAAGTCAGGTGGTCTTGGTGATTTGAAGTACCCACTAATTGCTGATATC
ACCAAATCAATTTCAAAATCCTATGGTGTTCTGATCCCTGGATCAGGGAA
TTGCATTGAGAGGACTCTTTATTATTGACAAAGAAAGGAGTCATCCAGCA
CTCAACCATTAACAACCTTGCCATTGGTAGGAGTGTTGACGAAACACTGA
GAACACTT
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