CF417915

Overview
NameCF417915
Unique NameCF417915
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH2_PICTO (Probable peroxiredoxin 2 OS=Picrophilus torridus GN=PTO0727 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.255e-19
Identity = 48/124 (38.71%), Postives = 78/124 (62.90%), Query Frame = 2
Query:  236 IPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCI 607
            +P  +G  APDF A          + LSDY   K+V+LF +P DFT +C TE   FS RY +F++LN E++G+S DS+ SH+ W++   +  G+ ++++P+IADI K I++ Y ++   +GN +
Sbjct:    1 MPVYLGKRAPDFTANTTRGV----ISLSDY-KNKWVLLFSHPADFTPICTTEFIEFSRRYNDFKELNVELIGLSVDSLQSHIEWLKDIYEKFGI-EIQFPVIADINKEIAREYNLIDENAGNTV 118          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_HYPBU (Probable peroxiredoxin OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0228 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.944e-19
Identity = 46/127 (36.22%), Postives = 74/127 (58.27%), Query Frame = 2
Query:  242 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            P +G   P+        +    +KL D+   K+ +LF +P DFT VC TE  AF+ RY +F+KLNTE++G+S DS FSH+ W +  ++  G+ ++ +P+IAD T  ++K  G+L   S     R ++
Sbjct:    6 PSIGEKFPEIEVMTTHGK----IKLPDHFRGKWFVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSTFSHIKWAEWIKEKLGV-EIPFPIIADPTGEVAKKLGLLHAQSSTATVRAVF 127          

HSP 2 Score: 21.557 bits (44), Expect = 2.944e-19
Identity = 9/25 (36.00%), Postives = 15/25 (60.00%), Query Frame = 1
Query:  634 KGVIQHSTINNLAIGRSVDETLRTL 708
            KGV++        +GR++DE LR +
Sbjct:  132 KGVVRAILYYPQEVGRNIDEILRLI 156          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_AQUAE (Probable peroxiredoxin OS=Aquifex aeolicus GN=aq_858 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19
Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 2
Query:  242 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIP 589
            P +G  AP F A+  F      VK  D    ++V+LF +P DFT VC TE  AF+  Y EF+K N +++G+S DS FSH+AWV   ++  G+ ++ +P+IAD    ++K YG++ P
Sbjct:    7 PRLGEPAPAFEAQTTFGP----VKFPDDFKGQWVVLFSHPADFTPVCTTEFVAFAKNYEEFKKRNVQLIGLSVDSNFSHIAWVMNIKEKFGI-EIPFPIIADHNMEVAKKYGMIHP 117          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH2_THETN (Probable peroxiredoxin 2 OS=Thermoanaerobacter tengcongensis GN=TTE2186 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19
Identity = 52/116 (44.83%), Postives = 74/116 (63.79%), Query Frame = 2
Query:  242 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIP 589
            P +G  APDF A + F      +KLSDY GK +V+LF +P DFT VC TE  AF+  YT F + N +++G+S DS  SHLAWV+   K+ G+ ++ +P+I D    I+K YG++ P
Sbjct:   15 PQIGAPAPDFKANSTFGP----IKLSDYRGK-WVVLFSHPGDFTPVCTTEFIAFTQVYTSFVERNVQLIGLSVDSNPSHLAWVENIYKTTGV-EIPFPIIEDKDMRIAKLYGMISP 124          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH2_THEAC (Probable peroxiredoxin 2 OS=Thermoplasma acidophilum GN=Ta0954 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.567e-19
Identity = 49/117 (41.88%), Postives = 75/117 (64.10%), Query Frame = 2
Query:  248 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSG 598
            +G  APDF            V LS Y GK +V+LF +P DFT VC TE  AF++RY +F+ L  E+LG+S DSV+SH+AW++  ++  G+ ++ +P+IADI K +++ Y ++   SG
Sbjct:    1 MGQKAPDFTVNTSKGP----VTLSSYRGK-WVLLFSHPGDFTPVCTTEFIAFTERYKDFQALGVELLGLSIDSVYSHIAWIRDIKEHFGI-EIPFPIIADIDKEVARQYNLIDEKSG 111          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_THEP1 (Probable peroxiredoxin OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=Tpet_0121 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.098e-18
Identity = 46/127 (36.22%), Postives = 74/127 (58.27%), Query Frame = 2
Query:  242 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            PL+G   P    +    ++     L D    K+ +LF +P DFT VC TE  AF  RY EF+KLNTE++G+S D VFSH+ W++  ++  G+ ++++P+IAD    +S+  G++ P  G    R ++
Sbjct:    6 PLIGEEFPRLEVKTTHGKKI----LPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFKKLNTELIGLSIDQVFSHIKWIEWIKEKLGV-EIEFPVIADDLGEVSRRLGLIHPSKGTNTVRAVF 127          

HSP 2 Score: 20.4014 bits (41), Expect = 1.098e-18
Identity = 8/29 (27.59%), Postives = 16/29 (55.17%), Query Frame = 1
Query:  622 LLTKKGVIQHSTINNLAIGRSVDETLRTL 708
            ++   G+I+        +GR++DE LR +
Sbjct:  128 IVDPNGIIRAIVYYPQEVGRNIDEILRAV 156          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_THEMA (Probable peroxiredoxin OS=Thermotoga maritima GN=TM_0807 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.415e-18
Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 2
Query:  242 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            PL+G   P    +    ++     L D    K+ +LF +P DFT VC TE  AF  RY EF KLNTE++G+S D VFSH+ W++  ++  G+ ++++P+IAD    +S+  G++ P  G    R ++
Sbjct:    6 PLIGEEFPRVEVKTTHGKKV----LPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFRKLNTELIGLSIDQVFSHIKWIEWIKEKLGV-EIEFPVIADDLGEVSRRLGLIHPNKGTNTVRAVF 127          

HSP 2 Score: 20.4014 bits (41), Expect = 2.415e-18
Identity = 8/29 (27.59%), Postives = 16/29 (55.17%), Query Frame = 1
Query:  622 LLTKKGVIQHSTINNLAIGRSVDETLRTL 708
            ++   G+I+        +GR++DE LR +
Sbjct:  128 IVDPNGIIRAIVYYPQEVGRNIDEILRAV 156          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_STAMF (Probable peroxiredoxin OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=Smar_0058 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18
Identity = 46/127 (36.22%), Postives = 75/127 (59.06%), Query Frame = 2
Query:  242 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            PL+G   P+        +    +KL DY   KY +LF +P DFT VC TE  AF+ RY +F+KLNTE++G+S DS FSH+ W++  ++  G+ ++ +P++AD   +++   G+L   S     R ++
Sbjct:    6 PLIGEKFPEMEVVTQHGK----IKLPDYFKGKYWVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSNFSHIKWIEWIKEKLGV-EIPFPIMADPRGTVASKLGMLHAASSTHTVRAVF 127          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH2_SULTO (Probable peroxiredoxin 2 OS=Sulfolobus tokodaii GN=ST2442 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 8.980e-18
Identity = 47/132 (35.61%), Postives = 75/132 (56.82%), Query Frame = 2
Query:  227 SVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            S E  PL+G   P+        +    +KL DY   K+ +LF +P DFT VC TE  +F+ +Y EF+KLNTE++G+S DS  SH+ WV    K+  + ++ +P+IAD   +++K  G++   S     R ++
Sbjct:    2 SEEKIPLIGEKFPEMEVITTHGK----IKLPDYYQGKWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWVMWIEKNLKV-EIPFPIIADPMGNVAKRLGMIHAESSTSTVRAVF 128          

HSP 2 Score: 23.8682 bits (50), Expect = 8.980e-18
Identity = 9/29 (31.03%), Postives = 19/29 (65.52%), Query Frame = 1
Query:  622 LLTKKGVIQHSTINNLAIGRSVDETLRTL 708
            ++  KG+++      + IGR++DE LR++
Sbjct:  129 IVDDKGIVRLIMYYPMEIGRNIDEILRSI 157          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_METJA (Probable peroxiredoxin OS=Methanocaldococcus jannaschii GN=MJ0736 PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18
Identity = 47/129 (36.43%), Postives = 75/129 (58.14%), Query Frame = 2
Query:  242 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKK--YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            P++G   P+   +         +KL DY  +K  + +LF +P DFT VC TE   F  RY EF KLNTE++G+S D VFSHL WV+  ++   + ++++P+IAD    +++  G++ P  GN   R ++
Sbjct:    2 PVIGEKFPEVEVKTTHGA----IKLPDYYVEKGKWFVLFSHPADFTPVCTTEFVGFQKRYDEFRKLNTELIGLSIDQVFSHLKWVEWIKEKLNV-EIEFPIIADDRGELAEKLGMISPYKGNNTVRAVF 125          
The following BLAST results are available for this feature:
BLAST of CF417915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
TDXH2_PICTO2.255e-1938.71Probable peroxiredoxin 2 OS=Picrophilus torridus G... [more]
TDXH_HYPBU2.944e-1936.22Probable peroxiredoxin OS=Hyperthermus butylicus (... [more]
TDXH_AQUAE3.846e-1940.52Probable peroxiredoxin OS=Aquifex aeolicus GN=aq_8... [more]
TDXH2_THETN3.846e-1944.83Probable peroxiredoxin 2 OS=Thermoanaerobacter ten... [more]
TDXH2_THEAC8.567e-1941.88Probable peroxiredoxin 2 OS=Thermoplasma acidophil... [more]
TDXH_THEP11.098e-1836.22Probable peroxiredoxin OS=Thermotoga petrophila (s... [more]
TDXH_THEMA2.415e-1836.22Probable peroxiredoxin OS=Thermotoga maritima GN=T... [more]
TDXH_STAMF3.256e-1836.22Probable peroxiredoxin OS=Staphylothermus marinus ... [more]
TDXH2_SULTO8.980e-1835.61Probable peroxiredoxin 2 OS=Sulfolobus tokodaii GN... [more]
TDXH_METJA9.472e-1836.43Probable peroxiredoxin OS=Methanocaldococcus janna... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-845 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417915 ID=CF417915; Name=CF417915; organism=Citrus sinensis; type=EST; length=708bp
AACAAAAACAATGGCTTGCTCAGCTGCTTCTGCTGCTGCCACGGCAACAG
CCGCTCTCATTTCCTCTAACCCCAAGGCTTTCTCTTCTTCCTCAATCTCC
CCTTCTCAAAACCTAACCATTCCCCGCTCCTTCTCCGGCCTCCGCAATCC
CCTCCAGTCCCAGGTCCCCCGCCCCGTTTCTCTTTCCCGCGGGTCCCGTT
CTCGCAAGTCCTTCGTTGTCAAAGCATCCGTTGAAATACCACCATTGGTG
GGCAACACGGCACCTGATTTTGCTGCAGAGGCTGTTTTCGATCAAGAGTT
CATCAATGTCAAGCTTTCGGATTACATTGGGAAGAAATATGTGATTCTCT
TTTTCTACCCGTTGGACTTCACATTTGTTTGCCCCACAGAAATCACTGCT
TTCAGCGACCGATATACTGAATTTGAGAAGCTAAACACAGAGATATTGGG
TGTCTCAACCGACAGTGTGTTTTCACACTTGGCATGGGTCCAAACAGACA
GAAAGTCAGGTGGTCTTGGTGATTTGAAGTACCCACTAATTGCTGATATC
ACCAAATCAATTTCAAAATCCTATGGTGTTCTGATCCCTGGATCAGGGAA
TTGCATTGAGAGGACTCTTTATTATTGACAAAGAAAGGAGTCATCCAGCA
CTCAACCATTAACAACCTTGCCATTGGTAGGAGTGTTGACGAAACACTGA
GAACACTT
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