CF417915

Overview
NameCF417915
Unique NameCF417915
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_METMA (Probable peroxiredoxin OS=Methanosarcina mazei GN=MM_0814 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17
Identity = 51/121 (42.15%), Postives = 73/121 (60.33%), Query Frame = 2
Query:  242 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWV-----QTDRKSGGLGDLKYPLIADITKSISKSYGVLIP 589
            PL+G+ AP F A  V  Q  I     DY GK +VILF +P DFT VC TE   F+    EF  +NTE++G+S DSVFSH+AW+     + + K     ++K+P+I D+   ++K YG++ P
Sbjct:    2 PLIGDDAPSFTA--VTTQGIIKFP-DDYKGK-WVILFSHPADFTPVCTTEFMTFASMQEEFRSMNTELIGLSIDSVFSHIAWLKRIEEKIEYKGMKNLEIKFPVIEDLKMDVAKKYGMVQP 118          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_ARCFU (Probable peroxiredoxin OS=Archaeoglobus fulgidus GN=AF_0270 PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17
Identity = 44/127 (34.65%), Postives = 75/127 (59.06%), Query Frame = 2
Query:  242 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            PL+G+  P+        +    +KL +    K+ +LF +P DFT VC TE  AF +RY EF KLN E++G+S D VFSH+ W++  ++   + ++++P+IAD T  +++  G++ P  G    R ++
Sbjct:    3 PLLGDNFPEIEVVTTHGR----MKLPEAFKGKWFVLFSHPADFTPVCTTEFVAFQNRYDEFRKLNCELIGLSIDQVFSHIKWIEWIKEKLDI-EIEFPVIADDTGRVAEMLGLIHPAKGTNTVRAVF 124          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH1_THETN (Probable peroxiredoxin 1 OS=Thermoanaerobacter tengcongensis GN=TTE0270 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 3.335e-17
Identity = 42/101 (41.58%), Postives = 64/101 (63.37%), Query Frame = 2
Query:  320 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            DY GK +V LF +P DFT VC TE   F+ +  EF++LNTE++G+S D VFSH+ WV+  + + G+  + +P+IAD    +S   G++ PG G    R ++
Sbjct:   25 DYAGKWFV-LFSHPADFTPVCTTEFVEFARKAEEFKQLNTELIGLSVDQVFSHIKWVEWIKDNTGV-QIPFPVIADELGRVSNQLGMIHPGKGTNTVRAVF 123          

HSP 2 Score: 23.483 bits (49), Expect = 3.335e-17
Identity = 12/29 (41.38%), Postives = 17/29 (58.62%), Query Frame = 1
Query:  622 LLTKKGVIQHSTINNLAIGRSVDETLRTL 708
            ++  KGVI+        +GR+VDE LR L
Sbjct:  124 IVDDKGVIRLIMYYPQEVGRNVDEILRAL 152          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_IGNH4 (Probable peroxiredoxin OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=Igni_0459 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.307e-17
Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 2
Query:  242 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            PL+G   P    E V   +    KL D    K++++F +P DFT VC TE  AF+ RY +F+KLNTE+LG+S D+ FSH+ W +  ++   + ++ +P+IAD    ++   G+L P  G    R ++
Sbjct:    6 PLIGEKLP----EMVVHTDHGPKKLPDDYKGKWLVIFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELLGLSVDNSFSHIKWKEWIKEKLNV-EIPFPIIADPLGQVATKLGMLHPEGGVVTVRAVF 127          

HSP 2 Score: 20.7866 bits (42), Expect = 7.307e-17
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  667 LAIGRSVDETLRTL 708
            L +GR++DE LR L
Sbjct:  143 LNVGRNIDEILRLL 156          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_SULSO (Probable peroxiredoxin OS=Sulfolobus solfataricus GN=SSO2121 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.093e-16
Identity = 46/132 (34.85%), Postives = 76/132 (57.58%), Query Frame = 2
Query:  227 SVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            S E  PL+G   P+   E +  Q    +KL D    ++ +LF +P DFT VC TE  +F+ +Y EF+KLNTE++G+S DS  SH+ W+    K+  + ++ +P+IAD   +++K  G++   S     R ++
Sbjct:    2 SEERIPLIGERFPEM--EVITTQG--RIKLPDDYKGRWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWIMWIEKNLKV-EIPFPIIADPMGNVAKRLGMIHAQSSTATVRAVF 128          

HSP 2 Score: 23.483 bits (49), Expect = 2.093e-16
Identity = 10/25 (40.00%), Postives = 16/25 (64.00%), Query Frame = 1
Query:  634 KGVIQHSTINNLAIGRSVDETLRTL 708
            KGV++      + IGR++DE LR +
Sbjct:  133 KGVVRLILYYPMEIGRNIDEILRAI 157          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_METMP (Probable peroxiredoxin OS=Methanococcus maripaludis GN=MMP1174 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 39/96 (40.62%), Postives = 62/96 (64.58%), Query Frame = 2
Query:  335 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            K+ +LF +P DFT VC TE  AF  RY +F +LNTE++G+S D VFSH+ WV+  ++   + D+++P+IAD    ++   G++ P  GN   R ++
Sbjct:   31 KWFVLFSHPGDFTPVCTTEFVAFQKRYDQFRELNTELIGLSIDQVFSHIKWVEWIKEKLDV-DIEFPIIADDRGELAVKLGMISPYKGNNTVRAVF 125          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_METVS (Probable peroxiredoxin OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0492 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 45/125 (36.00%), Postives = 73/125 (58.40%), Query Frame = 2
Query:  281 AVFDQEFINVKLSDYIGK-----------KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            AV  ++F +V+L    GK           K+ +LF +P DFT VC TE  AF  RY +F +LNTE++G+S D VFSH+ WV+  ++   + D+++P+IAD    ++   G++ P  G+   R ++
Sbjct:    2 AVIGEKFPDVELLTTHGKLKLPEHFIEAGKWFVLFSHPGDFTPVCTTEFVAFQKRYDQFRELNTELIGLSIDQVFSHIKWVEWIKEKLDV-DIEFPIIADERGDLAVKLGMISPFKGSNTVRAVF 125          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH_METM5 (Probable peroxiredoxin OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0413 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 39/96 (40.62%), Postives = 61/96 (63.54%), Query Frame = 2
Query:  335 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCIERTLY 622
            K+ +LF +P DFT VC TE  AF  RY +F  LNTE++G+S D VFSH+ WV+  ++   + D+++P+IAD    ++   G++ P  GN   R ++
Sbjct:   31 KWFVLFSHPGDFTPVCTTEFVAFQKRYDQFRSLNTELIGLSIDQVFSHIKWVEWIKEKLDV-DIEFPIIADDRGELAVKLGMISPYKGNNTVRAVF 125          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: TDXH1_SULTO (Probable peroxiredoxin 1 OS=Sulfolobus tokodaii GN=ST0584 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.865e-15
Identity = 40/97 (41.24%), Postives = 60/97 (61.86%), Query Frame = 2
Query:  320 DYIGK-KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPGSGNCI 607
            D  GK K++ LF +P DFT VC TE  AFS +Y EF+KL  E++G+S DS++SH+ W+    +  G+  + +P+IAD  K +++    L   SG  I
Sbjct:   25 DIFGKGKWLFLFAHPADFTPVCTTEFVAFSQKYEEFKKLGVELVGLSVDSIYSHIQWLMDIEQRYGV-KVPFPVIADPDKKLARMLDALDEASGQTI 120          

HSP 2 Score: 20.7866 bits (42), Expect = 4.865e-15
Identity = 9/28 (32.14%), Postives = 16/28 (57.14%), Query Frame = 1
Query:  619 LLLTKKGVIQHSTINNLAIGRSVDETLR 702
            +L +  G+I+      +  GR++DE LR
Sbjct:  124 VLASPDGIIRFVAQYPMEFGRNIDELLR 151          
BLAST of CF417915 vs. ExPASy Swiss-Prot
Match: AHPC_SALTY (Alkyl hydroperoxide reductase subunit C OS=Salmonella typhimurium GN=ahpC PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 2
Query:  245 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 574
            L+      F  +A  + EFI V   D  G+ + + FFYP DFTFVCPTE+   +D Y E +KL  ++  VSTD+ F+H AW      S  +  +KY +I D T ++++++
Sbjct:    3 LINTKIKPFKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAW---HSSSETIAKIKYAMIGDPTGALTRNF 108          
The following BLAST results are available for this feature:
BLAST of CF417915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
TDXH_METMA1.237e-1742.15Probable peroxiredoxin OS=Methanosarcina mazei GN=... [more]
TDXH_ARCFU2.110e-1734.65Probable peroxiredoxin OS=Archaeoglobus fulgidus G... [more]
TDXH1_THETN3.335e-1741.58Probable peroxiredoxin 1 OS=Thermoanaerobacter ten... [more]
TDXH_IGNH47.307e-1736.22Probable peroxiredoxin OS=Ignicoccus hospitalis (s... [more]
TDXH_SULSO2.093e-1634.85Probable peroxiredoxin OS=Sulfolobus solfataricus ... [more]
TDXH_METMP1.975e-1540.63Probable peroxiredoxin OS=Methanococcus maripaludi... [more]
TDXH_METVS2.580e-1536.00Probable peroxiredoxin OS=Methanococcus vannielii ... [more]
TDXH_METM52.580e-1540.63Probable peroxiredoxin OS=Methanococcus maripaludi... [more]
TDXH1_SULTO4.865e-1541.24Probable peroxiredoxin 1 OS=Sulfolobus tokodaii GN... [more]
AHPC_SALTY1.672e-1437.27Alkyl hydroperoxide reductase subunit C OS=Salmone... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-845 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417915 ID=CF417915; Name=CF417915; organism=Citrus sinensis; type=EST; length=708bp
AACAAAAACAATGGCTTGCTCAGCTGCTTCTGCTGCTGCCACGGCAACAG
CCGCTCTCATTTCCTCTAACCCCAAGGCTTTCTCTTCTTCCTCAATCTCC
CCTTCTCAAAACCTAACCATTCCCCGCTCCTTCTCCGGCCTCCGCAATCC
CCTCCAGTCCCAGGTCCCCCGCCCCGTTTCTCTTTCCCGCGGGTCCCGTT
CTCGCAAGTCCTTCGTTGTCAAAGCATCCGTTGAAATACCACCATTGGTG
GGCAACACGGCACCTGATTTTGCTGCAGAGGCTGTTTTCGATCAAGAGTT
CATCAATGTCAAGCTTTCGGATTACATTGGGAAGAAATATGTGATTCTCT
TTTTCTACCCGTTGGACTTCACATTTGTTTGCCCCACAGAAATCACTGCT
TTCAGCGACCGATATACTGAATTTGAGAAGCTAAACACAGAGATATTGGG
TGTCTCAACCGACAGTGTGTTTTCACACTTGGCATGGGTCCAAACAGACA
GAAAGTCAGGTGGTCTTGGTGATTTGAAGTACCCACTAATTGCTGATATC
ACCAAATCAATTTCAAAATCCTATGGTGTTCTGATCCCTGGATCAGGGAA
TTGCATTGAGAGGACTCTTTATTATTGACAAAGAAAGGAGTCATCCAGCA
CTCAACCATTAACAACCTTGCCATTGGTAGGAGTGTTGACGAAACACTGA
GAACACTT
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