CF418021
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF418021 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.190e-25 Identity = 53/121 (43.80%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 154 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAS 516 KRL ++ + L GI+ P +++ W A + GP DT ++ +KLTL+F DYP KPP V+F + +HPN+ G+ICLDIL+ W+ YDV IL S+QSLL +PN SP N++A+ Sbjct: 33 KRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAA 153
BLAST of CF418021 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.190e-25 Identity = 55/122 (45.08%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 154 KRLMRDFKRLQQDPPAGISGAP-QDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAS 516 KRL + +L IS P DN + W I GP DTP+ G FK++L+F ++YP PP ++F+S M+HPN+ G+ICLDIL+ +WS +Y+V IL S+QSLL +PN SP N+ A+ Sbjct: 11 KRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAA 132
BLAST of CF418021 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.473e-25 Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 136 MSTPARKRLMRDFKRLQQDPPAGISGAPQ-DNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAS 516 M+ A KRLM ++K+L +PP GI P + + W A+I GP+DT ++ G F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +AS Sbjct: 1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDAS 141
BLAST of CF418021 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.473e-25 Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 136 MSTPARKRLMRDFKRLQQDPPAGISGAPQ-DNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAS 516 M+ A KRLM ++K+L +PP GI P + + W A+I GP+DT ++ G F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +AS Sbjct: 1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDAS 141
BLAST of CF418021 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.473e-25 Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 136 MSTPARKRLMRDFKRLQQDPPAGISGAPQ-DNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAS 516 M+ A KRLM ++K+L +PP GI P + + W A+I GP+DT ++ G F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +AS Sbjct: 1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDAS 141
BLAST of CF418021 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.473e-25 Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 136 MSTPARKRLMRDFKRLQQDPPAGISGAPQ-DNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAS 516 M+ A KRLM ++K+L +PP GI P + + W A+I GP+DT ++ G F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +AS Sbjct: 1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDAS 141
BLAST of CF418021 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.335e-25 Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 154 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAS 516 KRL ++ L GIS P +I W I GP +T + G T++L+L F YP P V+F++ FHPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN SP N++A+ Sbjct: 35 KRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAA 155
BLAST of CF418021 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.219e-24 Identity = 55/140 (39.29%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 136 MSTPARKRLMRDFKRLQQDPPAGISGAPQ-DNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 513 MS A+KRL+++ ++L +D P GI P+ +N+I +W+ +I GP DTP+ G F L+F +DYP PP + F + HPNIY +G +C+ IL + +WSP+ V IL S+ S+L +PN S AN +A Sbjct: 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDA 140
BLAST of CF418021 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.219e-24 Identity = 54/122 (44.26%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 154 KRLMRDFKRLQQDPPAGISGAPQ-DNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAS 516 KRL + L GIS P D++++ W I GP DT ++G FK+++ F +YP PPT+ F S M+HPN+ G+ICLDIL+++WS +Y+V IL S+QSLL +PN SP N++A+ Sbjct: 31 KRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAA 152
BLAST of CF418021 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.633e-24 Identity = 56/143 (39.16%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 136 MSTPARKRLMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEASAD 522 M++ A L + K L + P G S G + +I W+ I GP DT ++GG F + F ++YPN PPTVRF S M+HPN+Y+DG +C+ IL +W+P++ V +I+ SI S+L PN SPAN EA+ + Sbjct: 1 MASQASLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKE 143 The following BLAST results are available for this feature:
BLAST of CF418021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 250
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Sequences
The
following sequences are available for this feature:
EST sequence >CF418021 ID=CF418021; Name=CF418021; organism=Citrus sinensis; type=EST; length=668bpback to top |