CF418022

Overview
NameCF418022
Unique NameCF418022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15
Identity = 48/168 (28.57%), Postives = 82/168 (48.81%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQ-DYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            LP   +++S ++ +F + G+D   LV L G H++G  HC ++ +RLY      + DP L+ ++   +  KC            +  D G+    D +Y++ +   +GL   D  L  ++ T+ YV K   S    FFK+F  ++  +     LTG  GE+RK C + N
Sbjct:  166 LPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKCKPT----DTTTALEMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEVRKKCRMVN 329          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.111e-15
Identity = 50/156 (32.05%), Postives = 79/156 (50.64%), Query Frame = 2
Query:   44 SVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK 508
            S ++  FA   +D   LV+L G+H+ G  HC     R      +PA++      + +KC    P     Q +  D  TP V DN YY +++  +GL   D  L     T+    + + +Q  FF++F+R++T +S  + LTGTKGEIR  C + N+
Sbjct:    1 STLISSFANRSLDVADLVSLSGAHTFGVAHCPAFEDRSSRVRHNPAIDGKFATALRNKCSGDNPSGTLTQKL--DVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHPTTKRMATRFSLNQGAFFEQFARSMTKMSNMDILTGTKGEIRNNCAVPNR 154          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.370e-15
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLH 514
            +P  N ++  +   F   G     +VAL G+H++G +HC +   RLY    D  +NP     +   C +   D     +  ND  TP   DN Y++N+    GL+  DH L  D  T+P+V   A ++  FF++F+RA+  L          GE+R+ C+  N L+
Sbjct:  170 VPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTVDDTIAAF--NDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEVRRRCDHFNNLN 333          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.370e-15
Identity = 50/171 (29.24%), Postives = 88/171 (51.46%), Query Frame = 2
Query:    8 LEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            L+  LP    S+S  +  F   G++    VALLG+H+VG+ +C     R+         DP+++P  V  + + C ++            D+ +P+  DN +++ I   +G++ VD +LA+D +TR  V + A +  +F ++F RA+  +   + LTG  GEIR+ C   N
Sbjct:  150 LDVTLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLRNTCRNSAT-------AALDQSSPLRFDNQFFKQIRKRRGVLQVDQRLASDPQTRGIVARYANNNAFFKRQFVRAMVKMGAVDVLTGRNGEIRRNCRRFN 313          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.370e-15
Identity = 48/162 (29.63%), Postives = 75/162 (46.30%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            +P    S+S ++ +F A G+    +VAL G+H++G+  C     R+Y E +  ++          CP A            D  TP   DN YY+N+++ KGL+  D  L     T   VK    +   F  +F   +  + +  PLTG++GEIRK C   N
Sbjct:  163 IPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETN--IDSSFAKTRQASCPSASGSGDN-NLAPLDLQTPTTFDNYYYKNLINQKGLLHSDQVLYNGGSTDSTVKTYVNNPKTFTSDFVAGMIKMGDITPLTGSEGEIRKSCGKVN 321          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.370e-15
Identity = 52/171 (30.41%), Postives = 86/171 (50.29%), Query Frame = 2
Query:    5 ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY---PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            I ++ LP+   S++ + E F   G++   LVAL G+H++G+  C+    RLY    ++D   +         +CP    D         D+ TP   DNNYYRN++  KGL+  D  L  T   T   V + +++   F  +FS A+  + +   LTG+ G+IR++C+  N
Sbjct:  152 IADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLYDNSSDIDAGFSSTR----KRRCPVNGGDTTLAPL---DQVTPNSFDNNYYRNLMQKKGLLESDQVLFGTGASTDSIVTEYSRNPSRFASDFSAAMIKMGDIQTLTGSDGQIRRICSAVN 315          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.370e-15
Identity = 55/170 (32.35%), Postives = 82/170 (48.24%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKR--TRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            LP    +++ + + FA +G++ P  LVAL G H+ GR  C  +  RLY        DP L+P ++  +   CP    +      V  D  TP   D  YY N+ + KGL+  D +L +     T P V   + +   FF  F  A+  +    PLTGT+GEIR+ C + N
Sbjct:  167 LPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCPQ---NGNGTVLVNFDVVTPNTFDRQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTFAFFGAFVDAMIRMGNLRPLTGTQGEIRQNCRVVN 333          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.370e-15
Identity = 51/169 (30.18%), Postives = 89/169 (52.66%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHM-LHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKK-MAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            +P    +++ +   FA  G+D   LV L G+H++G +HC    +RLY        DPAL+ ++  ++   KCP ++ D K +  V  D G+    D +YY+ +L  +GL   D  L T+  T   + + +  S   FF EF++++  +   N  TG+ G +R+ C++AN
Sbjct:  160 IPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCP-SLNDNKTI--VEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQCSVAN 325          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.370e-15
Identity = 58/168 (34.52%), Postives = 82/168 (48.81%), Query Frame = 2
Query:   56 ERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 517
            + F  +G++ +  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +   CP    +      V  D  TP + DN YY N+ + KGL+  D +L     ATD  T P V+  A S   FF  F  A+  +    PLTGT+G+IR  C + N    LHD
Sbjct:  180 DSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP---LNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATD--TIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNSNSLLHD 342          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.013e-15
Identity = 51/171 (29.82%), Postives = 79/171 (46.20%), Query Frame = 2
Query:    8 LEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            +E  LP  +D++  +   F    +    ++AL  +H++G  HC K+  R++       VDP LN  +   +   CP  + DP+    +  D  TP   DN Y++N+   KGL   D  L TD R+RP V   A +   F + F  A+T L        + G IR+ C   N
Sbjct:  162 VEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACPKNV-DPRIA--INMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLFTDGRSRPTVNAWASNSTAFNRAFVIAMTKLGRVGVKNSSNGNIRRDCGAFN 329          
The following BLAST results are available for this feature:
BLAST of CF418022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PER56_ARATH3.148e-1528.57Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER2_HORVU4.111e-1532.05Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]
PER65_ARATH5.370e-1530.12Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER57_ARATH5.370e-1529.24Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER4_VITVI5.370e-1529.63Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER4_ARATH5.370e-1530.41Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER3_ARMRU5.370e-1532.35Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER3_ARATH5.370e-1530.18Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER1A_ARMRU5.370e-1534.52Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER35_ARATH7.013e-1529.82Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-952 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF418022 ID=CF418022; Name=CF418022; organism=Citrus sinensis; type=EST; length=683bp
AGAGATACTTGAGCAGTATCTCCCAGATCACAATGACAGCATGTCTGTTG
TTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCT
CTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCA
CCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGC
ATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAG
TATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTA
TAGGAACATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAG
CCACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCAAGAGTCAA
GACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTTTCTGAGAA
CAACCCTCTCACAGGTACAAAGGGTGAGATCCGAAAGGTTTGCAATCTTG
CCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACAGCTGTATTAGCTAC
AACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTTCTTCTATGAGGAAG
AAAAGAGTGTGAGATGAGCTCCCAATAAGATGGTTTTTCTAGATCGGTTT
GTTTCCTGTGAGATGTTCGTATTACTGCTATTA
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