CF418022

Overview
NameCF418022
Unique NameCF418022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:534..1216. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15
Identity = 50/173 (28.90%), Postives = 82/173 (47.40%), Query Frame = 2
Query:    5 ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQ-DYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            I E  LP   D+++ ++  F + G++   LV L G H++G  HC  L +RLY      + DP+L+ ++   +  KC            +  D G+    D +Y+  +   +GL   D  L  + +TR YV +  ++    FF +F  ++  +     LTG  GEIRK C  AN
Sbjct:  153 INEVNLPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRKKCKPT----DTTTALEMDPGSFKTFDLSYFTLVAKRRGLFQSDAALLDNSKTRAYVLQQIRTHGSMFFNDFGVSMVKMGRTGVLTGKAGEIRKTCRSAN 321          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14
Identity = 51/171 (29.82%), Postives = 86/171 (50.29%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDY----FFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            LP   DS+ +   +F   G++   LVAL G+H++G   C  +  RL+        DP+++   +P +   CP    +  A + V  D G+    D +Y+ N+ + +G++  D +L TD  T+ +V++    +      F  EF R++  +S     TGT GEIRKVC+  N
Sbjct:  163 LPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCPQ---NGDASRRVGLDTGSVNNFDTSYFSNLRNGRGVLESDQKLWTDASTQVFVQRFLGIRGLLGLTFGVEFGRSMVKMSNIEVKTGTNGEIRKVCSAIN 330          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14
Identity = 48/158 (30.38%), Postives = 74/158 (46.84%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 493
            LP    S+  +L  ++   +DA  +VAL G+H++G+  C      +Y + +  +N      +   CP +     A      D  TP V  N+YY+N+L  KGL+  D +L  +  T   V   A S   F   F+ A+  +    PLTGT G+IR  C
Sbjct:  164 LPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIYNDTN--INAAFATSLKANCPMSGGSSLAPL----DTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGSTDSTVSNFASSSAAFTSAFTAAMVKMGNLGPLTGTSGQIRLTC 315          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.562e-14
Identity = 52/170 (30.59%), Postives = 83/170 (48.82%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPD------HVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            +P   ++++V++ +F   G+D   LVAL G+H+ GR  C     RL+   + + NPD       +  +   CP    +     +   D  TP   DN+Y+ N+  N+GL+  D +L   +   T   V + A SQ  FF +F  ++  L   +PLTGT G+IR  C   N
Sbjct:  158 IPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLF-NFNGSGNPDLTVDATFLQTLQGICPQGGNNGNT--FTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKRVN 324          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.562e-14
Identity = 55/171 (32.16%), Postives = 81/171 (47.37%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRN-DRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFF---KEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            LP     +  + + FA  G++A  LV L G H++G + C  +  RLY      + DP++NP +V  +  KCP     P   +   N D G+ +  D +Y++ +   KGL   D  L  D  T+ YV+  A     F    K+FS ++  L     LTG  GEIRK C   N
Sbjct:  160 LPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCP-----PTDFRTSLNMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPVFSSFNKDFSDSMVKLGFVQILTGKNGEIRKRCAFPN 325          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.041e-14
Identity = 48/162 (29.63%), Postives = 78/162 (48.15%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            LP  + S++ ++  F+  G+D   +VAL G+H++G+  C     RLY E +  ++      +   CP       +      D  TP   D+ YY N+L NKGL+  D  L     T   V+  + +   F   F+ A+  +   +PLTGT+G+IR  C+  N
Sbjct:  156 LPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETN--IDSSFATALKANCPRPTGSGDS-NLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTAAMVKMGNISPLTGTQGQIRLNCSKVN 314          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.041e-14
Identity = 49/175 (28.00%), Postives = 87/175 (49.71%), Query Frame = 2
Query:   14 QYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-YPEVDPALNPDHVPH-------MLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKM---AKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            Q++P  N S+  ++  F   G++   L+AL G+H++G+  CV    R+  P ++     D           +  +C D+  D +       D  TP   DN+Y+ N+L+ +GL++ D+ L ++       +K+   A +QD FF +F  ++  +   N LTG +GEIR+ C   N
Sbjct:  164 QFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPL---DIKTPAYFDNHYFINLLEGRGLLISDNVLVSEDHEGEIFQKVWEYAVNQDLFFIDFVESMLKMGNINVLTGIEGEIRENCRFVN 335          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.665e-14
Identity = 51/166 (30.72%), Postives = 79/166 (47.59%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTK-GEIRKVCNL 499
            +P  N ++  +++ FA+ G+    LV L GSH++G  HC   + RLY        DP+L+   +  +   CP +      V  +  D  TP V DN Y+  +  N GL+  D  L  D RT+P   +MA+ +  F K F  A+  +       G + GEIR  C +
Sbjct:  181 IPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVVLPL--DATTPFVFDNGYFTGLGTNMGLLGSDQALFLDPRTKPIALEMARDKQKFLKAFGDAMDKMGSIGVKRGKRHGEIRTDCRV 344          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.481e-14
Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 493
            LP  N  +S ++  FA  G++   +VAL GSH++G+  C++   R+Y      + P+    +   CP   P          D  TP   DNNYYRN++ ++GL++ D  L     T   V +   +   F  +F+ A+  +SE   +TGT G +R +C
Sbjct:  164 LPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNST-LRIEPNFNRSLSQACP---PTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.481e-14
Identity = 48/162 (29.63%), Postives = 78/162 (48.15%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            LP  + S++ ++  F+  G+D   +VAL G+H++G+  C     RLY E +  ++      +   CP       +      D  TP   D+ YY N+L NKGL+  D  L     T   V+  + +   F   F+ A+  +   +PLTGT+G+IR  C+  N
Sbjct:  156 LPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETN--IDSSFATALKANCPRPTGSGDS-NLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTVAMVKMGNISPLTGTQGQIRLNCSKVN 314          
The following BLAST results are available for this feature:
BLAST of CF418022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PER27_ARATH9.159e-1528.90Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PERN1_TOBAC1.196e-1429.82Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER42_MAIZE1.196e-1430.38Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PERX_TOBAC1.562e-1430.59Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER1_ARATH1.562e-1432.16Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER2_ORYSJ2.041e-1429.63Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER20_ARATH2.041e-1428.00Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER19_ARATH2.665e-1430.72Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER2_ZINEL3.481e-1430.38Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER2_ORYSI3.481e-1429.63Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-952 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF418022 ID=CF418022; Name=CF418022; organism=Citrus sinensis; type=EST; length=683bp
AGAGATACTTGAGCAGTATCTCCCAGATCACAATGACAGCATGTCTGTTG
TTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCT
CTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCA
CCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGC
ATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAG
TATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTA
TAGGAACATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAG
CCACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCAAGAGTCAA
GACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTTTCTGAGAA
CAACCCTCTCACAGGTACAAAGGGTGAGATCCGAAAGGTTTGCAATCTTG
CCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACAGCTGTATTAGCTAC
AACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTTCTTCTATGAGGAAG
AAAAGAGTGTGAGATGAGCTCCCAATAAGATGGTTTTTCTAGATCGGTTT
GTTTCCTGTGAGATGTTCGTATTACTGCTATTA
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