CF418022

Overview
NameCF418022
Unique NameCF418022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:534..1216. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.481e-14
Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 493
            LP  N  +S ++  FA  G++   +VAL GSH++G+  C++   R+Y      + P+    +   CP   P          D  TP   DNNYYRN++ ++GL++ D  L     T   V +   +   F  +F+ A+  +SE   +TGT G +R +C
Sbjct:  164 LPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNST-LRIEPNFNRSLSQACP---PTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PERX_LUPPO (Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14
Identity = 46/161 (28.57%), Postives = 80/161 (49.69%), Query Frame = 2
Query:   23 PDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            P  +  ++ +  +FAA G+    L  L G H++G++ C     R+Y + +  ++ +        CP +      +  +  D  TP   DNNYY++++ N+GL+  D  L         V+  + +   FF +F+ AI  +S+ +PLTG  GEIRK C + N
Sbjct:    2 PGPSSDLTTLTTKFAAKGLTPSDLTVLSGGHTIGQSECQFFKTRIYNDTN--IDTNFATSRQANCPFSAGGETNLAPL--DSLTPNRFDNNYYKDLVSNRGLLHSDQVLFNGGSQDTLVRTYSTNNVKFFSDFAAAIVKMSKISPLTGIAGEIRKNCRVIN 158          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14
Identity = 47/167 (28.14%), Postives = 81/167 (48.50%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            LP    ++  + + F+  G+    +V L G+H++GR+HC    +RLY        DP L+P +   +  +CP    +   V  V  +  +P + D  YY ++L N+GL   D  L TD  T   V++ A +   +  +F+ A+  + +   L G  G+IR  C + N
Sbjct:  197 LPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCPQGSTNTNLV--VPMNPSSPSITDVGYYVDVLRNRGLFTSDQTLLTDTTTATQVRQNAGNPFLWKNKFASAMVKMGQLGVLIGEAGQIRANCRVIN 361          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.937e-14
Identity = 53/171 (30.99%), Postives = 84/171 (49.12%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCP-DAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFF---KEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            LP   DS++V   RFA   ++   LV L   H++G   C+    R +        DP + P  VP +  +CP +  P  + V     D G+    D +Y  N+ + +GL+  D  L T+  TRP V+++   +  F     EF+R++T +S+    TG  GEIR+VC+  N
Sbjct:  164 LPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPLNGDPATRVVL----DTGSGDQFDTSYLNNLKNGRGLLESDQVLWTNLETRPIVERLLGLRFPFLIFGLEFARSMTKMSQIEIKTGLDGEIRRVCSAVN 330          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.754e-14
Identity = 47/146 (32.19%), Postives = 73/146 (50.00%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-----YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLL 442
            LP    ++S +++ FAA G+    +V L G H++G +HC     RL     + ++DP++N      +  KCP      K    V +   T  V DN YY+ IL  KG+   D  L  D RT+  V+  A+ Q  FF+EF+ ++  L
Sbjct:  160 LPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLDS--TSSVFDNVYYKQILSGKGVFGSDQALLGDSRTKWIVETFAQDQKAFFREFAASMVKL 303          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.754e-14
Identity = 53/168 (31.55%), Postives = 79/168 (47.02%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP--EVDPALNPDH---VPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            LP  N ++S ++  F  +G+    +VAL G H++G+  C     RL P     PA + D+   +  +   C    P   +V   + D  TP   DN YY N+L  +GL+  D  LA  D  TR  V+  A  Q  FF++F  A  ++       G+  EIRK C + N
Sbjct:  186 LPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARLQPLQTGQPANHGDNLEFLESLQQLCSTVGP---SVGITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPGTRAIVETYATDQSVFFEDFKNA--MVKMGGIPGGSNSEIRKNCRMIN 348          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.013e-13
Identity = 47/167 (28.14%), Postives = 78/167 (46.71%), Query Frame = 2
Query:    5 ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            + E  LP   D ++ ++  FA+ G+    +VAL G+H++G+  C     R+Y      ++         +CP    +         D  TP   DNNY++N++  KGL+  D  L     T   V + + S   F  +F+ A+  + + +PL+G  G IRKVC   N
Sbjct:  160 LAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIYSN-GTDIDAGFASTRRRQCPQEGENGNLAPL---DLVTPNQFDNNYFKNLIQKKGLLQSDQVLFNGGSTDNIVSEYSNSARAFSSDFAAAMIKMGDISPLSGQNGIIRKVCGSVN 322          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.013e-13
Identity = 50/165 (30.30%), Postives = 77/165 (46.67%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD--KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            LP   ++++ +  +F  + +D+  LVAL G+H+ G++ C     RL     D  LNP +   +   C           +V  D  TP   D NYY N+  N G +  D  L +   + T   V   A SQ+ FF+ F +++  +    PLTG +GEIR  C   N
Sbjct:  133 LPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRLNVSNPDSTLNPRYAQQLRQACSSGRDT-----FVNLDPTTPNKFDKNYYTNLQSNTGPLTSDQVLHSTPGEDTVKIVNLFAASQNQFFESFGQSMINMGNIQPLTGNQGEIRSNCRRLN 292          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.323e-13
Identity = 50/169 (29.59%), Postives = 79/169 (46.75%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK--RTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 505
            +P  N ++  +L  F   G++   LV+L G H++G   C     RLY +      D  L   +   +   CP    D         D  +P   DN Y++ +L  KGL+  D  L T    +T   VK  A+ +  FF++F++++  +    PLTG  GEIRK C++ N
Sbjct:  181 IPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPL---DLASPARFDNTYFKLLLWGKGLLTSDEVLLTGNVGKTGALVKAYAEDERLFFQQFAKSMVNMGNIQPLTGFNGEIRKSCHVIN 346          
BLAST of CF418022 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.323e-13
Identity = 51/169 (30.18%), Postives = 79/169 (46.75%), Query Frame = 2
Query:   20 LPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLT--GTKGEIRKVCNLAN 505
            LP    + + + + FA   +D   LVAL G+H++G  HC     RL       + DP+LNP +   +  +C D          V  D   P+  D+ Y+ ++L NKGL   D  L TD  +  ++  + ++   F  +F R++  +S    LT     GEIRK C L N
Sbjct:  183 LPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDP-SAAHIASVFQNSGAFLAQFGRSMIKMSSIKVLTLGDQGGEIRKNCRLVN 350          
The following BLAST results are available for this feature:
BLAST of CF418022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PER1_ZINEL3.481e-1430.38Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PERX_LUPPO4.546e-1428.57Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 ... [more]
PER5_VITVI4.546e-1428.14Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER70_ARATH5.937e-1430.99Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER66_ARATH7.754e-1432.19Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER40_ARATH7.754e-1431.55Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PERX_NICSY1.013e-1328.14Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER2_CUCSA1.013e-1330.30Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER9_ARATH1.323e-1329.59Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER24_ARATH1.323e-1330.18Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-952 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF418022 ID=CF418022; Name=CF418022; organism=Citrus sinensis; type=EST; length=683bp
AGAGATACTTGAGCAGTATCTCCCAGATCACAATGACAGCATGTCTGTTG
TTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCT
CTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCA
CCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGC
ATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAG
TATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTA
TAGGAACATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAG
CCACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCAAGAGTCAA
GACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTTTCTGAGAA
CAACCCTCTCACAGGTACAAAGGGTGAGATCCGAAAGGTTTGCAATCTTG
CCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACAGCTGTATTAGCTAC
AACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTTCTTCTATGAGGAAG
AAAAGAGTGTGAGATGAGCTCCCAATAAGATGGTTTTTCTAGATCGGTTT
GTTTCCTGTGAGATGTTCGTATTACTGCTATTA
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