CF418031

Overview
NameCF418031
Unique NameCF418031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: MRCKB_RAT (Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus GN=Cdc42bpb PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.083e-14
Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 3
Query:  330 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGVF 578
            +DFE + +IG+GAFGEV + + K T  I+AMK L K EMLKR +    R ER++L   D + I  L Y+FQD ++LYL+M  +
Sbjct:   74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENYLYLVMDYY 156          

HSP 2 Score: 20.7866 bits (42), Expect = 1.083e-14
Identity = 7/14 (50.00%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMR 612
            +Y  GGD++TLL +
Sbjct:  154 DYYVGGDLLTLLSK 167          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: DBF20_YEAST (Serine/threonine-protein kinase DBF20 OS=Saccharomyces cerevisiae GN=DBF20 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.110e-14
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 3
Query:  240 VSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            VSN+   E      +RE E +R +R K    DF+ LT +G+G +G+V L + K + EI A+K L K  + K  +  HV +ER++L    S  +V+L Y+FQD + LYL M
Sbjct:  137 VSNKVLNEEWALYLQREHEVLRKRRLKPKHKDFQILTQVGQGGYGQVYLAKKKDSDEICALKILNKKLLFKLNETNHVLTERDILTTTRSDWLVKLLYAFQDPESLYLAM 246          

HSP 2 Score: 24.6386 bits (52), Expect = 1.110e-14
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDIL 624
            E++PGGD  TLL+   IL
Sbjct:  247 EFVPGGDFRTLLINTRIL 264          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: ROCK_CAEEL (Rho-associated protein kinase let-502 OS=Caenorhabditis elegans GN=let-502 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.842e-14
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 3
Query:  276 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            + R E     L   ++   DF QL +IG+GAFGEV L R   T  ++AMK L K +M+KR        ER+++A  +S  IV+L Y+FQD   LY++M
Sbjct:   48 ISRYERVVESLAALRMKAADFRQLKVIGRGAFGEVHLVRHTRTNTVYAMKMLNKDDMIKRADSAFFWEERDIMAHANSEWIVRLQYAFQDPRHLYMVM 145          

HSP 2 Score: 23.483 bits (49), Expect = 1.842e-14
Identity = 7/17 (41.18%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            EY+PGGD++ L+   ++
Sbjct:  146 EYMPGGDLVNLMTSYEV 162          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: MRCKB_MOUSE (Serine/threonine-protein kinase MRCK beta OS=Mus musculus GN=Cdc42bpb PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.373e-14
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 3
Query:  330 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGVF 578
            +DFE + +IG+GAFGEV + + + T  I+AMK L K EMLKR +    R ER++L   D + I  L Y+FQD ++LYL+M  +
Sbjct:   74 EDFEIIKVIGRGAFGEVAVVKMRNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENYLYLVMDYY 156          

HSP 2 Score: 20.7866 bits (42), Expect = 2.373e-14
Identity = 7/14 (50.00%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMR 612
            +Y  GGD++TLL +
Sbjct:  154 DYYVGGDLLTLLSK 167          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: ROCK_CAEBR (Rho-associated protein kinase let-502 OS=Caenorhabditis briggsae GN=let-502 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.392e-14
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 3
Query:  333 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            DF QL +IG+GAFGEV L R   T  ++AMK L K +M+KR        ER+++A  +S  IV+L Y+FQD   LY++M
Sbjct:   67 DFRQLKVIGRGAFGEVHLVRHTRTNTVYAMKMLNKDDMIKRADSAFFWEERDIMAHANSEWIVRLQYAFQDPRHLYMVM 145          

HSP 2 Score: 23.483 bits (49), Expect = 2.392e-14
Identity = 7/17 (41.18%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            EY+PGGD++ L+   ++
Sbjct:  146 EYMPGGDLVNLMTSYEV 162          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: CBK1_EMENI (Serine/threonine-protein kinase cbk1 OS=Emericella nidulans GN=cbk1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.913e-14
Identity = 57/190 (30.00%), Postives = 84/190 (44.21%), Query Frame = 3
Query:  117 TRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQR-------------RKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGE-------------------------IFAMKKLKKSEMLKRGQVEHVRSERN-LLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            T +  A  K F+E H+   L GL  R +             +S EE   + ++   +E +Y+R  R                 +  FE L ++G+G+FG VRL R K T E                         +FAMK ++KS M++  Q  H+R+ER+ L+A   SR +V L  SFQD   LYL+M
Sbjct:  274 TTEATAIVKVFLETHFHTLLSGLDARTQRRLELDQYIETFPLSPEEVVRVRKHWVTQERDYLRQYRVLKSRPQDKTSRAGTASLAGFEPLKILGRGSFGVVRLVREKRTDEQTQSGRVPLAPKTNHRQAMTGVKKDVFAMKVIRKSVMIRNCQEAHLRAERDFLVASAKSRWVVPLIASFQDQKHLYLVM 463          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: MRCKB_HUMAN (Serine/threonine-protein kinase MRCK beta OS=Homo sapiens GN=CDC42BPB PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.083e-14
Identity = 39/83 (46.99%), Postives = 54/83 (65.06%), Query Frame = 3
Query:  330 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGVF 578
            +DFE + +IG+GAFGEV + + K T  I+AMK L K EMLKR +    R ER++L   D + I  L Y+FQD + LYL+M  +
Sbjct:   74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYY 156          

HSP 2 Score: 20.7866 bits (42), Expect = 3.083e-14
Identity = 7/14 (50.00%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMR 612
            +Y  GGD++TLL +
Sbjct:  154 DYYVGGDLLTLLSK 167          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: YPK2_YEAST (Serine/threonine-protein kinase YPK2/YKR2 OS=Saccharomyces cerevisiae GN=YPK2 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.968e-14
Identity = 42/111 (37.84%), Postives = 68/111 (61.26%), Query Frame = 3
Query:  294 EYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGVFTWW-*HYDITNERRYS 623
            +Y   + + + IDDF+ L +IGKG+FG+V   R K T +I+A+K L+K+ ++ + +V H  +ER +LA VD   IV L +SFQ  + LYL++         Y + +E R+S
Sbjct:  330 DYKPSKNKPLSIDDFDLLKVIGKGSFGKVMQVRKKDTQKIYALKALRKAYIVSKCEVTHTLAERTVLARVDCPFIVPLKFSFQSPEKLYLVLAFINGGELFYHLQHEGRFS 440          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: PPK18_SCHPO (Serine/threonine-protein kinase ppk18 OS=Schizosaccharomyces pombe GN=ppk18 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.968e-14
Identity = 38/82 (46.34%), Postives = 58/82 (70.73%), Query Frame = 3
Query:  327 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN-LLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            I D+E +  I KG FG V L R  TTGEI+A+K L+K +M+ + QV +V++ER  L+A+ +S  + +L+Y+FQ  D+LYL+M
Sbjct:  561 IQDYEIIKPISKGTFGTVYLSRKNTTGEIYAIKVLRKVDMISKNQVANVKAERAVLMAQEESAFVAKLYYAFQSRDYLYLVM 642          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: CEK1_SCHPO (Serine/threonine-protein kinase cek1 OS=Schizosaccharomyces pombe GN=cek1 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 4.968e-14
Identity = 39/82 (47.56%), Postives = 60/82 (73.17%), Query Frame = 3
Query:  327 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN-LLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            I+D++ L  I KGAFG V L + +TTG+ FA+K LKKS M+ + QV +VR+ER  L+++ +S  + +L+Y+FQ  D+LYL+M
Sbjct:  586 INDYKILKPISKGAFGSVYLAQKRTTGDYFAIKILKKSNMIAKNQVINVRAERAILMSQGESPFVAKLYYTFQSKDYLYLVM 667          
The following BLAST results are available for this feature:
BLAST of CF418031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
MRCKB_RAT1.083e-1446.99Serine/threonine-protein kinase MRCK beta OS=Rattu... [more]
DBF20_YEAST1.110e-1439.09Serine/threonine-protein kinase DBF20 OS=Saccharom... [more]
ROCK_CAEEL1.842e-1440.82Rho-associated protein kinase let-502 OS=Caenorhab... [more]
MRCKB_MOUSE2.373e-1445.78Serine/threonine-protein kinase MRCK beta OS=Mus m... [more]
ROCK_CAEBR2.392e-1446.84Rho-associated protein kinase let-502 OS=Caenorhab... [more]
CBK1_EMENI2.913e-1430.00Serine/threonine-protein kinase cbk1 OS=Emericella... [more]
MRCKB_HUMAN3.083e-1446.99Serine/threonine-protein kinase MRCK beta OS=Homo ... [more]
YPK2_YEAST4.968e-1437.84Serine/threonine-protein kinase YPK2/YKR2 OS=Sacch... [more]
PPK18_SCHPO4.968e-1446.34Serine/threonine-protein kinase ppk18 OS=Schizosac... [more]
CEK1_SCHPO4.968e-1447.56Serine/threonine-protein kinase cek1 OS=Schizosacc... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-961 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF418031 ID=CF418031; Name=CF418031; organism=Citrus sinensis; type=EST; length=624bp
TGATTTCGGCGAAAATGGACGGTCGTGATGATACGGTTAGATTAGGTGCT
CTAAACTTGAAGCCGGCTGCTCGTGAATTCGATTTGGATCCAGACGTGTC
CGTTTCATCGCCGGTGACGAGACAGAAAGCCGCTGCCGCAAAGCAGTTCA
TTGAGAATCATTACAAGAACTACTTGCAAGGATTGCAAGATCGTAAAGAG
AGGCGTAGAGCCCTTCAAATGAGAGCACAACAAGCTGCGGTCTCAAATGA
GGAACAAGAGGAGATGCTGAGGAATTTAGAGCGCAGAGAAACTGAATATA
TGAGGCTGCAGAGGCGTAAAATTGGGATTGATGACTTTGAGCAATTAACT
TTAATTGGAAAAGGTGCATTTGGTGAGGTCAGGTTATGTCGTGCTAAAAC
TACTGGAGAGATCTTTGCCATGAAGAAATTGAAGAAATCGGAGATGCTTA
AACGAGGACAGGTTGAGCATGTTCGATCAGAGAGGAACTTACTTGCAGAG
GTTGATAGTCGGTGCATAGTACAGCTTTTCTACTCTTTTCAAGATTCTGA
TTTCTTATATCTCATCATGGGAGTATTTACCTGGTGGTGACATTATGACA
TTACTAATGAGAGAAGATATTCTT
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