CF418040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 241.891 bits (616), Expect = 2.356e-63 Identity = 119/199 (59.80%), Postives = 152/199 (76.38%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRA 596 V AQHS C+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG F E F +PIGKAKIER+G +T+ + S+ VG L+AA +L+KEG+ EVIN+R+IRP+D TI ASV KTN LVTVE G+PQ GVGAEICA ++E +F++LDAP R+ GADVPMPYA LE ++PQV+DI+ A Sbjct: 154 VAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFA 352
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 231.491 bits (589), Expect = 3.185e-60 Identity = 119/203 (58.62%), Postives = 150/203 (73.89%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAXRA 608 V AQHS ++AWYA PGLKV+ PYS+EDA+GLLKAAIRD +PVVFLENE+LYG+SFPV EVL F +PIGKAKIER G VTI ++S+ V SL+AA+ L G+SAEVINLRS+RP D +I SV KT+ LV+VE G+P G+G+EI A V+E + F LDAP+ R+ G DVPMPY LE A+P E +V+A ++ Sbjct: 146 VAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLENEILYGQSFPVGDEVLSDDFVVPIGKAKIERAGDHVTIVSYSRGVEFSLEAAKQLEAIGVSAEVINLRSLRPFDFESIRQSVHKTHHLVSVETGWPFAGIGSEIAAQVMESDVFDQLDAPLLRVTGVDVPMPYTQTLEAAALPTAEHVVKAVKKS 348
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 2.282e-58 Identity = 118/205 (57.56%), Postives = 146/205 (71.22%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAXRACYR 617 VGAQH+ + WYA+VPGL VL+PY + DA+GLLKAAIR DPVVFLE ELLYG++F V F LPIGKA+I REGKDVTI ++S V +L AAE LAKEGI AEVI+LR++RPLD+ TI S+ KTNR+VTVE+G+P + +EI A +EE F LDAPV R+ AD P PYA NLE+ + E I+ A + CYR Sbjct: 260 VGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTFDVPKM---DDFVLPIGKARIIREGKDVTIVSYSIGVSFALTAAEALAKEGIDAEVIDLRTLRPLDKETILQSLAKTNRIVTVEDGWPVCSISSEIAAIAMEEGFDNLDAPVLRVTNADTPTPYAENLEKKGLVNPEAIIEAVRKVCYR 461
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.304e-57 Identity = 114/198 (57.58%), Postives = 138/198 (69.70%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVR 593 V QHS + AW+ PG+KV+ PY EDARGLLKAA+RD +PV+ LENE+LYG FPVS E F LP G+AKI+R GKD+TI + S V +SL AA+ LAK GI EVINLR +RPLD T+ SV KT LVTVE G+P GVGAEI A V E ++F YLD P+ R+ G DVPMPYA LE A+PQ D+V+ Sbjct: 155 VAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVRDDNPVICLENEILYGMKFPVSPEAQSPDFVLPFGQAKIQRPGKDITIVSLSIGVDVSLHAADELAKSGIDCEVINLRCVRPLDFQTVKDSVIKTKHLVTVESGWPNCGVGAEISARVTESDAFGYLDGPILRVTGVDVPMPYAQPLETAALPQPADVVK 352
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.136e-56 Identity = 112/207 (54.11%), Postives = 147/207 (71.01%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAXRACYRSV 623 V AQHS Y A Y+ VPGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF V + +P G+AKI REG VTI FS V L+L AA +L + I EVI+LR+I+PLD TI SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G DVP+P+A NLE++A+P D++ A + CY SV Sbjct: 124 VAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDVPETIEP----IPFGQAKILREGSSVTIVTFSIQVKLALDAANVLQNDNIDCEVIDLRTIKPLDTDTIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPFAVNLEKLALPSESDVIEAVKKVCYYSV 326
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.644e-56 Identity = 111/204 (54.41%), Postives = 147/204 (72.06%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAXRACY 614 V AQHS YAA Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF +S V +P GKAK+ +EG VTI FS V L+L AA IL + I+ EVI+LR+I+PLD TI SV+KT RLV +EEG+ G+GA I A V++E+F YLDAPVE ++G DVP+PYA NLE++A+P D++ A + CY Sbjct: 124 VAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSFDISENVEP----IPFGKAKVLKEGDSVTIVTFSIQVKLALDAANILQSDNINCEVIDLRTIKPLDIDTIIESVKKTGRLVVIEEGWFFAGIGATIAAIVMKEAFDYLDAPVEIVSGKDVPLPYAVNLEKLALPSEYDVINAVKKVCY 323
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.808e-55 Identity = 110/207 (53.14%), Postives = 145/207 (70.05%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAXRACYRSV 623 V AQHS Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PVVFLENE+LYG SF V + +P G+AKI REG VTI FS V L+L AA + + I EVI+LR+I+PLD TI SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G D+P+PYA NLE +A+P D++ A + CY S+ Sbjct: 124 VAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSFDVPKTIEP----IPFGQAKILREGSSVTIVTFSIQVKLALDAANFVQNDNIDCEVIDLRTIKPLDTETIIESVKKTNRLVVVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDLPLPYAVNLETLALPSESDVIEAVKKVCYYSI 326
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.172e-54 Identity = 107/207 (51.69%), Postives = 148/207 (71.50%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAXRACYRSV 623 V AQHS Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF V ++++ +P KAKI +EG +VTI FS V L+L IL + I E+I+LR+I+PLD +I SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G DVP+PYA NLE++A+P D++ A + CY S+ Sbjct: 124 VAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDVP-DIIEP---IPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPLDTDSIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSANDLIEAVKKVCYYSI 326
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.410e-54 Identity = 106/207 (51.21%), Postives = 148/207 (71.50%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAXRACYRSV 623 V AQHS Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF V ++++ +P KAKI +EG +VTI FS V L+L IL + I E+I+LR+I+PLD + I SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G DVP+PYA NLE++A+P D++ A + CY ++ Sbjct: 124 VAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDVP-DIIEP---IPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPLDTNMIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSANDLIEAVKKVCYYTI 326
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_BACST (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus stearothermophilus GN=pdhB PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 5.844e-38 Identity = 91/197 (46.19%), Postives = 124/197 (62.94%), Query Frame = 3 Query: 15 HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAXR 605 HS A PGLKV+ P + DA+GLL +AIRD DPV+FLE+ LY SF EV + + +PIGKA I+REGKD+TI A+ +V SLKAA L KEGISAEV++LR+++PLD TI SV KT R + V+E Q G+ A + A + E + L+APV R+A D P+ A E + +P +D++ A + Sbjct: 129 HSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLY-RSF--RQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPF-AQAESVWLPNFKDVIETAKK 321 The following BLAST results are available for this feature:
BLAST of CF418040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
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Sequences
The
following sequences are available for this feature:
EST sequence >CF418040 ID=CF418040; Name=CF418040; organism=Citrus sinensis; type=EST; length=680bpback to top |