CF418040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_CHAGL (Pyruvate dehydrogenase E1 component subunit beta OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.302e-37 Identity = 76/203 (37.44%), Postives = 134/203 (66.01%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAXRAC 611 +GA+HS +++ SVPGL++++ + + +GLLK+AIR+ +PV+F E+ LLY ++ +++ + L + KA++ R G D+TI +S++ L+AA++L +G E+I++ S++PLD TI+ SVRKT++++ VEE G+GA + A+++E+ F YLDAP++ ++ DVP PY+ LE + V Q I++A C Sbjct: 125 LGAEHSQRLESYFQSVPGLQMVACSTPYNGKGLLKSAIRNDNPVIFFEHVLLYN----LNENLIEQEYLLCLEKAEVVRPGNDITILTYSRMRHHVLQAAKVLVNKGYDPEIIDILSLKPLDMGTISLSVRKTHKVLIVEECMRTGGIGASLRAAILEDLFDYLDAPIQCLSSQDVPTPYSGPLEELTVIQPNQIIQAVEEMC 323
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ACOB_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoB PE=1 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 1.302e-37 Identity = 80/199 (40.20%), Postives = 121/199 (60.80%), Query Frame = 3 Query: 9 AQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAXR 605 AQHS + +PGLKV+ P + D +GLL AIRD DPV+F E++ LYG + EV + ++ +P G+A I R+GKDV+I + +V +L+AA LAKEGI AE+++LR++ PLD T+ SV T RLV V+E P+ + +I A V +++F L A +E + P+P++ LE + +P I AA + Sbjct: 137 AQHSQMLTPLFTHIPGLKVVCPSTPYDTKGLLIQAIRDNDPVIFCEHKNLYG----LEGEVPEGAYAIPFGEANIVRDGKDVSIVTYGLMVHRALEAAATLAKEGIEAEIVDLRTLSPLDMDTVLESVENTGRLVVVDEASPRCNIATDISAQVAQQAFGALKAGIEMVCPPHTPVPFSPTLEDLYIPSAAQIAAAARK 331
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.788e-37 Identity = 79/198 (39.90%), Postives = 129/198 (65.15%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRA 596 +GA+HS A++ ++PGLK+++ + +A+GLLK+AIRD +PVVF E+ LLY + E+ + + +P+ KA++ R+GKD+TI +S++ +A +L +G EV++L S++PLD +I+ SV+KT+R++ VEE G+GAE+ A + E F LDAPV R++ D+P PY +LE+ V Q I+ A Sbjct: 125 LGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYN----LQEEIPEDEYLIPLDKAEVVRKGKDITILTYSRMRHHVTEALPLLLNDGYDPEVLDLISLKPLDIDSISVSVKKTHRVLIVEECMKTAGIGAELIAQINEHLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPHQIIDA 318
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.102e-36 Identity = 81/196 (41.33%), Postives = 126/196 (64.29%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIV 590 +GA+HS A++ ++PGLK+++ + +A+GLLK+AIRD +PVVF E+ LLY + E+ + LP+ K + R+GKD+TI +S++ ++A L KEG EVI+L S++PLD +I+ SV+KT++++ VEE G+GAE+ A + E F LDAPV R++ D+P PY +LE+ V Q IV Sbjct: 125 LGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYN----LQEEIPQEEYFLPLNKVEFVRKGKDITILTYSRMRHHVIQALPALLKEGYDPEVIDLISLKPLDIDSISISVKKTHKVLIVEECMKTAGIGAELIAQINEYLFDELDAPVVRLSSQDIPTPYNGSLEQATVIQPSQIV 316
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 1.880e-36 Identity = 81/194 (41.75%), Postives = 118/194 (60.82%), Query Frame = 3 Query: 9 AQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIV 590 AQHS + S+PGLK + P + DA+GLL AAI D DPV F E++ Y + EV + + +P+GKA I+REG DVT+ A K V +L+AA L++ GI AEV++ RS+ PLD I S+ KTNRL+ ++E P+ + +I A V ++ F LDAP++RI P+P++ LE +P + IV Sbjct: 140 AQHSQSLYGLFTSIPGLKTVVPSNPYDAKGLLLAAIEDNDPVFFFEDKTSYN----MKGEVPEDYYTIPLGKADIKREGNDVTLFAVGKQVNTALEAAAQLSERGIEAEVLDPRSLSPLDEDAIFTSLEKTNRLIIIDEANPRCSIATDIAALVADKGFDLLDAPIKRITAPHTPVPFSPVLEDQYLPTPDKIV 329
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.455e-36 Identity = 79/198 (39.90%), Postives = 126/198 (63.64%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRA 596 + A+HS A++ +VPGLK+++ + +A+GLLKAAIRD +PV+FLE+ LLY + E+ + LP+ KA++ REG DVTI +S+++ ++A + L +G++ EVI+L S++P+D T+ SV KT++ + VEE G+ AE+ A + +F LDAP+ R++ DVP PY LE+ + Q IV A Sbjct: 126 LSAEHSQRIEAYFQAVPGLKIVACSTPYNAKGLLKAAIRDNNPVLFLEHVLLYN----LKQEIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQAVKQLVAQGMNPEVIDLISLKPIDLETLVTSVSKTHKAIIVEECMQTGGIAAEVMAQIYSHAFDELDAPIRRLSSKDVPTPYNGYLEQACLVQPTQIVEA 319
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_GRATL (Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria tenuistipitata var. liui GN=pdhB PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.592e-35 Identity = 77/198 (38.89%), Postives = 128/198 (64.65%), Query Frame = 3 Query: 3 VGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRA 596 +GA+HS A++ ++PGLK+++ + +A+GLLK+AIRD +PV+F E+ LLY + E+ + + LP+ KA++ R+G DVTI +S++ ++A L +G + EVI+L S++PLD ++I S+ KT++L+ VEE G+GAEI A + + F +LDAP+ R++ D+P PY LE+ V + I+ A Sbjct: 125 LGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVIFFEHVLLYN----LKDELPNDEYFLPLDKAELVRDGLDVTILTYSRMRHHVMQAVVDLVNDGYNPEVIDLISLKPLDITSIAQSLMKTHKLIIVEECMKTGGIGAEIIAQINDNYFDFLDAPIVRLSSQDIPTPYNGKLEKATVIYPQQIIEA 318
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODBB_BACSU (2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis GN=bfmBAB PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.079e-35 Identity = 82/198 (41.41%), Postives = 123/198 (62.12%), Query Frame = 3 Query: 15 HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVP-MPYAANLERMAVPQVEDIVRAAXR 605 HS A +A+ PGLK++ P + DA+GLLKAA+RD DPV+F E++ Y + EV + LPIGKA ++REG D+T+ + V +L+AAE L K+GISA V++LR++ PLD+ I + KT +++ V E + + +E+ A + E LDAP++R+AG D+P MPYA +E+ + D V AA R Sbjct: 129 HSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAAVRDEDPVLFFEHKRAYRL---IKGEVPADDYVLPIGKADVKREGDDITVITYGLCVHFALQAAERLEKDGISAHVVDLRTVYPLDKEAIIEAASKTGKVLLVTEDTKEGSIMSEVAAIISEHCLFDLDAPIKRLAGPDIPAMPYAPTMEKYFMVN-PDKVEAAMR 322
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.120e-34 Identity = 85/201 (42.29%), Postives = 119/201 (59.20%), Query Frame = 3 Query: 6 GAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAXRA 608 G HS A + GLKV++ + DA+GLLKAAIRD DPVVFLE + LY V EV + + LPIGKA + REGKD+T+ + ++ L+AA LAK G+SAEV++LR++ P D + SV KT R+V V + +E+ A++ E+ L AP R+ G D P PYA +++ +P V I+ AA RA Sbjct: 126 GHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRS---VKEEVPEEDYTLPIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYAQ--DKLYLPTVTRILNAAKRA 321
BLAST of CF418040 vs. ExPASy Swiss-Prot
Match: ODPB_BACSU (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus subtilis GN=pdhB PE=3 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 8.733e-34 Identity = 82/197 (41.62%), Postives = 122/197 (61.93%), Query Frame = 3 Query: 15 HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAXR 605 H+ A PG+KV+ P + DA+GLL +AIRD DPVVFLE+ LY SF EV + + + +GKA ++REG D++I + +V SLKAA+ L K+GISAEV++LR++ PLD TI ASV KT R + V+E Q G+ A + A + + + L+APV R+A D P+ + E + +P +D++ A + Sbjct: 129 HADSLEGLVAQQPGIKVVIPSTPYDAKGLLISAIRDNDPVVFLEHMKLY-RSF--RQEVPEEEYTIELGKADVKREGTDLSIITYGAMVHESLKAADELEKDGISAEVVDLRTVSPLDIDTIIASVEKTGRAIVVQEAQKQAGIAANVVAEINDRAILSLEAPVLRVAAPDTVFPF-SQAESVWLPNHKDVLETARK 321 The following BLAST results are available for this feature:
BLAST of CF418040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
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Sequences
The
following sequences are available for this feature:
EST sequence >CF418040 ID=CF418040; Name=CF418040; organism=Citrus sinensis; type=EST; length=680bpback to top |